Gene annotation
Transcriptome id Sobic.007G223200.2
Synonym Sb07g028850, SbDof22, DNA binding with One Finger
Functional annotation Homologous to Dof genes in Arabidopsis and rice. (PubMedID : 21161392)
dof zinc finger domain containing protein, putative, expressed
UniProt R4NF05 , H6VSW8 , A0A1Z5RBP3 , E6PBM9
Pfam PF02701
Panther DB PTHR31992 PTHR31992:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT1G21340 : Dof-type zinc finger DNA-binding family protein
RAP-DB (Rice) LOC_Os08g38220.1 : dof zinc finger domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a049197 , Zm00025a004485 , Zm00025a009285 , Zm00025a023031 , Zm00025a017356 , Zm00025a007115 , Zm00025a032602 , Zm00025a007401 , Zm00025a047370 , Zm00025a052752 , Zm00025a006464 , Zm00025a039572 , Zm00025a016727 , Zm00025a014147 , Zm00025a021740 , Zm00025a017302 , Zm00025a001854 , Zm00025a000851 , Zm00025a021884 , Zm00025a032473 , Zm00025a057389 , Zm00025a014756 , Zm00025a008288 , Zm00025a004967 , Zm00025a048181 , Zm00025a026723 , Zm00025a043793
Brachypodium KQK22335 , KQK14158 , PNT73247 , PNT69224 , KQK00955 , PNT65625 , PNT65624 , KQJ98766 , PNT69485 , KQK16070 , KQJ90639 , KQK03138 , KQK06036 , KQK14319 , KQK23432 , KQK00737 , KQJ84092 , KQK00738
Barley HORVU2Hr1G013060.1 , HORVU2Hr1G119160.6 , HORVU2Hr1G119160.4 , HORVU2Hr1G119160.2 , HORVU2Hr1G119160.3 , HORVU2Hr1G119160.1 , HORVU1Hr1G044560.1 , HORVU4Hr1G074990.3 , HORVU4Hr1G074990.2 , HORVU4Hr1G074990.1 , HORVU1Hr1G074140.1 , HORVU3Hr1G083460.1 , HORVU4Hr1G013890.1 , HORVU6Hr1G065250.4 , HORVU6Hr1G065250.5 , HORVU6Hr1G065250.6 , HORVU6Hr1G065250.7 , HORVU5Hr1G048700.1 , HORVU6Hr1G065250.2 , HORVU6Hr1G065250.3 , HORVU6Hr1G065250.8 , HORVU6Hr1G065250.9 , HORVU2Hr1G119110.3 , HORVU2Hr1G119110.7 , HORVU2Hr1G119110.6 , HORVU2Hr1G119110.5 , HORVU2Hr1G119110.4 , HORVU2Hr1G119110.9 , HORVU2Hr1G119110.8 , HORVU6Hr1G065250.1 , HORVU5Hr1G097620.1 , HORVU7Hr1G043250.2 , HORVU6Hr1G065250.10
Wheat TraesCS5B02G154100 , TraesCS2A02G402200 , TraesCS4B02G206800 , TraesCS2D02G563000 , TraesCS4A02G097800 , TraesCS5A02G155900 , TraesCS4B02G286400 , TraesCS2D02G563400 , TraesCS6D02G236700 , TraesCS2D02G563200 , TraesCS6B02G301500 , TraesCS4D02G285100 , TraesCS2B02G592600 , TraesCS4D02G207600 , TraesCS2D02G399500 , TraesCS2B02G592900 , TraesCS2A02G590800 , TraesCS2B02G592800 , TraesCS4A02G017700 , TraesCS6A02G274000 , TraesCS2B02G592700 , TraesCS2A02G591200 , TraesCS5D02G161000 , TraesCS6D02G254200 , TraesCS6B02G270100 , TraesCS2B02G420400 , TraesCS6A02G255500
Populus PNT43441


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cDNA sequences
Sobic.007G223200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G321800 OsRhmbd7 - Putative Rhomboid homologue, expressed -
2 Sobic.009G170100 DUF640 domain containing protein, putative, expressed -
3 Sobic.001G473900 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
4 Sobic.001G476400 - -
5 Sobic.006G205600 glycosyl hydrolases family 16, putative, expressed -
6 Sobic.001G061900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
7 Sobic.007G051800 down-regulated TF in developmental senescence(PubMedID : 27586543)@basic helix-loop-helix family protein, putative, expressed -
8 Sobic.001G316900 bZIP family transcription factor, putative, expressed -
9 Sobic.001G051600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase, putative, expressed -
10 Sobic.002G276400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
11 Sobic.006G073400 OsFBX132 - F-box domain containing protein, expressed -
12 Sobic.006G110000 - -
13 Sobic.001G063600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAMK_CAMK_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
14 Sobic.006G032200 heavy metal-associated domain containing protein, expressed -
15 Sobic.006G210300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
16 Sobic.009G258300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
17 Sobic.010G030900 glycosyltransferase, putative, expressed -
18 Sobic.006G095600 lipoxygenase (LOX) that catalyzes the first committed step of JA biosynthesis(PubMedID : 31597271)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
19 Sobic.002G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
20 Sobic.003G342600 DUF640 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic007G223200 Sobic007G223200 Sobic001G321800 Sobic001G321800 Sobic007G223200--Sobic001G321800 Sobic009G170100 Sobic009G170100 Sobic007G223200--Sobic009G170100 Sobic001G473900 Sobic001G473900 Sobic007G223200--Sobic001G473900 Sobic001G476400 Sobic001G476400 Sobic007G223200--Sobic001G476400 Sobic006G205600 Sobic006G205600 Sobic007G223200--Sobic006G205600 Sobic001G061900 Sobic001G061900 Sobic007G223200--Sobic001G061900 Sobic007G051800 Sobic007G051800 Sobic007G223200--Sobic007G051800 Sobic001G316900 Sobic001G316900 Sobic007G223200--Sobic001G316900 Sobic001G051600 Sobic001G051600 Sobic007G223200--Sobic001G051600 Sobic001G321800--Sobic006G205600 Sobic004G257300 Sobic004G257300 Sobic001G321800--Sobic004G257300 Sobic001G209800 Sobic001G209800 Sobic001G321800--Sobic001G209800 Sobic010G030900 Sobic010G030900 Sobic001G321800--Sobic010G030900 Sobic001G321800--Sobic001G476400 Sobic001G464900 Sobic001G464900 Sobic001G321800--Sobic001G464900 Sobic001G321800--Sobic007G223200 Sobic006G110000 Sobic006G110000 Sobic001G321800--Sobic006G110000 Sobic001G321800--Sobic001G473900 Sobic006G032200 Sobic006G032200 Sobic009G170100--Sobic006G032200 Sobic004G283300 Sobic004G283300 Sobic009G170100--Sobic004G283300 Sobic001G050800 Sobic001G050800 Sobic009G170100--Sobic001G050800 Sobic004G281200 Sobic004G281200 Sobic009G170100--Sobic004G281200 Sobic001G081600 Sobic001G081600 Sobic009G170100--Sobic001G081600 Sobic001G063600 Sobic001G063600 Sobic009G170100--Sobic001G063600 Sobic003G342600 Sobic003G342600 Sobic009G170100--Sobic003G342600 Sobic002G344700 Sobic002G344700 Sobic009G170100--Sobic002G344700 Sobic010G016500 Sobic010G016500 Sobic009G170100--Sobic010G016500 Sobic001G473900--Sobic001G476400 Sobic010G076600 Sobic010G076600 Sobic001G473900--Sobic010G076600 Sobic002G203000 Sobic002G203000 Sobic001G473900--Sobic002G203000 Sobic009G071800 Sobic009G071800 Sobic001G473900--Sobic009G071800 Sobic001G077700 Sobic001G077700 Sobic001G473900--Sobic001G077700 Sobic006G095600 Sobic006G095600 Sobic001G473900--Sobic006G095600 Sobic001G473900--Sobic001G209800 Sobic003G268700 Sobic003G268700 Sobic001G473900--Sobic003G268700 Sobic002G248100 Sobic002G248100 Sobic001G473900--Sobic002G248100 Sobic001G476400--Sobic001G063600 Sobic001G476400--Sobic001G051600 Sobic001G476400--Sobic001G473900 Sobic001G476400--Sobic010G076600 Sobic001G476400--Sobic001G081600 Sobic010G080400 Sobic010G080400 Sobic001G476400--Sobic010G080400 Sobic001G476400--Sobic006G095600 Sobic001G476400--Sobic004G283300 Sobic001G489600 Sobic001G489600 Sobic001G476400--Sobic001G489600 Sobic006G205600--Sobic001G321800 Sobic006G205600--Sobic001G209800 Sobic006G205600--Sobic004G257300 Sobic001G322200 Sobic001G322200 Sobic006G205600--Sobic001G322200 Sobic004G280900 Sobic004G280900 Sobic006G205600--Sobic004G280900 Sobic006G231100 Sobic006G231100 Sobic006G205600--Sobic006G231100 Sobic005G037000 Sobic005G037000 Sobic006G205600--Sobic005G037000 Sobic001G077400 Sobic001G077400 Sobic006G205600--Sobic001G077400 Sobic001G173300 Sobic001G173300 Sobic006G205600--Sobic001G173300 Sobic001G061900--Sobic001G316900 Sobic010G008600 Sobic010G008600 Sobic001G061900--Sobic010G008600 Sobic009G194200 Sobic009G194200 Sobic001G061900--Sobic009G194200 Sobic001G061900--Sobic001G321800 Sobic002G068800 Sobic002G068800 Sobic001G061900--Sobic002G068800 Sobic001G515800 Sobic001G515800 Sobic001G061900--Sobic001G515800 Sobic001G061900--Sobic007G223200 Sobic003G424300 Sobic003G424300 Sobic001G061900--Sobic003G424300 Sobic001G217300 Sobic001G217300 Sobic001G061900--Sobic001G217300 Sobic001G095700 Sobic001G095700 Sobic007G051800--Sobic001G095700 Sobic001G370600 Sobic001G370600 Sobic007G051800--Sobic001G370600 Sobic001G462800 Sobic001G462800 Sobic007G051800--Sobic001G462800 Sobic002G367900 Sobic002G367900 Sobic007G051800--Sobic002G367900 Sobic003G268900 Sobic003G268900 Sobic007G051800--Sobic003G268900 Sobic006G273800 Sobic006G273800 Sobic007G051800--Sobic006G273800 Sobic002G197600 Sobic002G197600 Sobic007G051800--Sobic002G197600 Sobic006G210300 Sobic006G210300 Sobic007G051800--Sobic006G210300 Sobic004G065900 Sobic004G065900 Sobic007G051800--Sobic004G065900 Sobic003G144200 Sobic003G144200 Sobic001G316900--Sobic003G144200 Sobic001G316900--Sobic001G061900 Sobic003G017200 Sobic003G017200 Sobic001G316900--Sobic003G017200 Sobic001G316900--Sobic009G170100 Sobic001G316900--Sobic006G110000 Sobic001G316900--Sobic002G068800 Sobic001G157400 Sobic001G157400 Sobic001G316900--Sobic001G157400 Sobic009G159900 Sobic009G159900 Sobic001G316900--Sobic009G159900 Sobic009G037800 Sobic009G037800 Sobic001G316900--Sobic009G037800 Sobic001G051600--Sobic001G489600 Sobic001G051600--Sobic001G476400 Sobic001G051600--Sobic006G095600 Sobic001G051600--Sobic002G203000 Sobic007G057100 Sobic007G057100 Sobic001G051600--Sobic007G057100 Sobic004G051166 Sobic004G051166 Sobic001G051600--Sobic004G051166 Sobic008G159100 Sobic008G159100 Sobic001G051600--Sobic008G159100 Sobic001G051600--Sobic001G081600 Sobic004G025000 Sobic004G025000 Sobic001G051600--Sobic004G025000
Octagon: transcription factors


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