Gene annotation
Transcriptome id Sobic.001G061900.1
Synonym Sb01g005610
Functional annotation glucan endo-1,3-beta-glucosidase precursor, putative, expressed
UniProt C5WY32
Pfam PF07983 PF00332
Panther DB PTHR32227 PTHR32227:SF97
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT2G19440 : O-Glycosyl hydrolases family 17 protein
RAP-DB (Rice) LOC_Os03g57880.1 : glucan endo-1,3-beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a015793 , Zm00025a016105 , Zm00025a017203 , Zm00025a016604
Brachypodium KQK12799 , KQK20720 , KQK13900 , KQJ88117
Barley HORVU6Hr1G091770.1 , HORVU4Hr1G002360.4 , HORVU4Hr1G002360.1 , HORVU3Hr1G110450.1 , HORVU3Hr1G110450.2 , HORVU5Hr1G104230.3 , HORVU5Hr1G104230.2 , HORVU5Hr1G104230.1 , HORVU5Hr1G104230.5 , HORVU5Hr1G104230.4
Wheat TraesCS3D02G506300 , TraesCS1A02G356800 , TraesCS5A02G429600 , TraesCS4B02G015500 , TraesCS1B02G373000 , TraesCS4A02G298200 , TraesCS5D02G437700 , TraesCS3A02G499400 , TraesCS3B02G562700 , TraesCS1D02G360900 , TraesCS4D02G013600 , TraesCS5B02G431600
Populus -


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cDNA sequences
Sobic.001G061900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G316900 bZIP family transcription factor, putative, expressed -
2 Sobic.010G008600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLD2 - cellulose synthase-like family D, expressed -
3 Sobic.009G194200 CSLC7 - cellulose synthase-like family C, expressed -
4 Sobic.001G321800 OsRhmbd7 - Putative Rhomboid homologue, expressed -
5 Sobic.002G068800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@galactosyltransferase family protein, putative, expressed -
6 Sobic.001G515800 no apical meristem protein, putative, expressed -
7 Sobic.007G223200 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
8 Sobic.003G424300 Pyrroline-5-carboxylate reductase(PubMedID : 24906815)@pyrroline-5-carboxylate reductase, putative, expressed K00286: pyrroline-5-carboxylate reductase
9 Sobic.001G217300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@auxin response factor 18, putative, expressed -
10 Sobic.006G110000 - -
11 Sobic.003G144200 Homeobox domain containing protein, expressed -
12 Sobic.004G264600 expressed protein -
13 Sobic.001G038200 leaf senescence related protein, putative, expressed -
14 Sobic.009G170100 DUF640 domain containing protein, putative, expressed -
15 Sobic.004G262600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
16 Sobic.001G152600 RIO1 family protein, expressed -
17 Sobic.001G050800 galactosyltransferase family protein, putative, expressed -
18 Sobic.003G017200 osFTL1 FT-Like1 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
19 Sobic.002G151400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cyclin-dependent kinase G-1, putative, expressed K08818: cell division cycle 2-like
20 Sobic.001G063600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAMK_CAMK_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase


Gene co-expression network
sample Sobic001G061900 Sobic001G061900 Sobic001G316900 Sobic001G316900 Sobic001G061900--Sobic001G316900 Sobic010G008600 Sobic010G008600 Sobic001G061900--Sobic010G008600 Sobic009G194200 Sobic009G194200 Sobic001G061900--Sobic009G194200 Sobic001G321800 Sobic001G321800 Sobic001G061900--Sobic001G321800 Sobic002G068800 Sobic002G068800 Sobic001G061900--Sobic002G068800 Sobic001G515800 Sobic001G515800 Sobic001G061900--Sobic001G515800 Sobic007G223200 Sobic007G223200 Sobic001G061900--Sobic007G223200 Sobic003G424300 Sobic003G424300 Sobic001G061900--Sobic003G424300 Sobic001G217300 Sobic001G217300 Sobic001G061900--Sobic001G217300 Sobic003G144200 Sobic003G144200 Sobic001G316900--Sobic003G144200 Sobic001G316900--Sobic001G061900 Sobic003G017200 Sobic003G017200 Sobic001G316900--Sobic003G017200 Sobic009G170100 Sobic009G170100 Sobic001G316900--Sobic009G170100 Sobic006G110000 Sobic006G110000 Sobic001G316900--Sobic006G110000 Sobic001G316900--Sobic002G068800 Sobic001G157400 Sobic001G157400 Sobic001G316900--Sobic001G157400 Sobic009G159900 Sobic009G159900 Sobic001G316900--Sobic009G159900 Sobic009G037800 Sobic009G037800 Sobic001G316900--Sobic009G037800 Sobic003G127100 Sobic003G127100 Sobic010G008600--Sobic003G127100 Sobic010G101400 Sobic010G101400 Sobic010G008600--Sobic010G101400 Sobic004G264600 Sobic004G264600 Sobic010G008600--Sobic004G264600 Sobic010G030900 Sobic010G030900 Sobic010G008600--Sobic010G030900 Sobic010G008600--Sobic009G194200 Sobic001G063600 Sobic001G063600 Sobic010G008600--Sobic001G063600 Sobic010G008600--Sobic001G061900 Sobic001G476400 Sobic001G476400 Sobic010G008600--Sobic001G476400 Sobic002G372800 Sobic002G372800 Sobic010G008600--Sobic002G372800 Sobic009G194200--Sobic010G008600 Sobic001G436100 Sobic001G436100 Sobic009G194200--Sobic001G436100 Sobic004G261200 Sobic004G261200 Sobic009G194200--Sobic004G261200 Sobic003G410700 Sobic003G410700 Sobic009G194200--Sobic003G410700 Sobic009G194200--Sobic001G061900 Sobic006G242100 Sobic006G242100 Sobic009G194200--Sobic006G242100 Sobic004G262600 Sobic004G262600 Sobic009G194200--Sobic004G262600 Sobic009G194200--Sobic010G101400 Sobic001G038200 Sobic001G038200 Sobic009G194200--Sobic001G038200 Sobic006G205600 Sobic006G205600 Sobic001G321800--Sobic006G205600 Sobic004G257300 Sobic004G257300 Sobic001G321800--Sobic004G257300 Sobic001G209800 Sobic001G209800 Sobic001G321800--Sobic001G209800 Sobic001G321800--Sobic010G030900 Sobic001G321800--Sobic001G476400 Sobic001G464900 Sobic001G464900 Sobic001G321800--Sobic001G464900 Sobic001G321800--Sobic007G223200 Sobic001G321800--Sobic006G110000 Sobic001G473900 Sobic001G473900 Sobic001G321800--Sobic001G473900 Sobic002G068800--Sobic001G063600 Sobic002G068800--Sobic001G157400 Sobic001G050800 Sobic001G050800 Sobic002G068800--Sobic001G050800 Sobic002G068800--Sobic009G170100 Sobic001G081600 Sobic001G081600 Sobic002G068800--Sobic001G081600 Sobic002G197600 Sobic002G197600 Sobic002G068800--Sobic002G197600 Sobic010G272101 Sobic010G272101 Sobic002G068800--Sobic010G272101 Sobic002G068800--Sobic001G476400 Sobic004G281200 Sobic004G281200 Sobic002G068800--Sobic004G281200 Sobic001G158200 Sobic001G158200 Sobic001G515800--Sobic001G158200 Sobic005G070101 Sobic005G070101 Sobic001G515800--Sobic005G070101 Sobic004G168000 Sobic004G168000 Sobic001G515800--Sobic004G168000 Sobic002G159000 Sobic002G159000 Sobic001G515800--Sobic002G159000 Sobic002G271000 Sobic002G271000 Sobic001G515800--Sobic002G271000 Sobic002G239101 Sobic002G239101 Sobic001G515800--Sobic002G239101 Sobic006G134700 Sobic006G134700 Sobic001G515800--Sobic006G134700 Sobic009G179000 Sobic009G179000 Sobic001G515800--Sobic009G179000 Sobic006G031900 Sobic006G031900 Sobic001G515800--Sobic006G031900 Sobic007G223200--Sobic001G321800 Sobic007G223200--Sobic009G170100 Sobic007G223200--Sobic001G473900 Sobic007G223200--Sobic001G476400 Sobic007G223200--Sobic006G205600 Sobic007G223200--Sobic001G061900 Sobic007G051800 Sobic007G051800 Sobic007G223200--Sobic007G051800 Sobic007G223200--Sobic001G316900 Sobic001G051600 Sobic001G051600 Sobic007G223200--Sobic001G051600 Sobic004G331900 Sobic004G331900 Sobic003G424300--Sobic004G331900 Sobic003G348200 Sobic003G348200 Sobic003G424300--Sobic003G348200 Sobic003G327600 Sobic003G327600 Sobic003G424300--Sobic003G327600 Sobic003G312400 Sobic003G312400 Sobic003G424300--Sobic003G312400 Sobic003G424300--Sobic001G061900 Sobic003G424300--Sobic009G194200 Sobic003G353400 Sobic003G353400 Sobic003G424300--Sobic003G353400 Sobic009G182200 Sobic009G182200 Sobic003G424300--Sobic009G182200 Sobic010G186500 Sobic010G186500 Sobic003G424300--Sobic010G186500 Sobic001G163300 Sobic001G163300 Sobic001G217300--Sobic001G163300 Sobic005G202000 Sobic005G202000 Sobic001G217300--Sobic005G202000 Sobic003G031500 Sobic003G031500 Sobic001G217300--Sobic003G031500 Sobic001G152600 Sobic001G152600 Sobic001G217300--Sobic001G152600 Sobic001G217300--Sobic001G316900 Sobic001G217300--Sobic004G262600 Sobic003G356300 Sobic003G356300 Sobic001G217300--Sobic003G356300 Sobic003G223900 Sobic003G223900 Sobic001G217300--Sobic003G223900 Sobic006G203400 Sobic006G203400 Sobic001G217300--Sobic006G203400
Octagon: transcription factors


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