Gene annotation
Transcriptome id Sobic.001G152600.1
Synonym Sb01g013245
Functional annotation RIO1 family protein, expressed
UniProt A0A1B6QJ40
Pfam PF00069
Panther DB PTHR24056 PTHR24056:SF195
NCBI CDD KOG0594; Protein kinase PCTAIRE and related kinases
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G63370 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os09g27350.1 : RIO1 family protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G161100 - -
2 Sobic.001G163300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@zinc finger protein-related, putative, expressed K11968: ariadne-1
3 Sobic.001G137400 ankyrin, putative, expressed -
4 Sobic.005G202000 expressed protein -
5 Sobic.003G191600 expressed protein -
6 Sobic.003G207000 expressed protein -
7 Sobic.001G217300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@auxin response factor 18, putative, expressed -
8 Sobic.005G166100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
9 Sobic.008G098700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio-family RNA binding repeat containing protein, expressed -
10 Sobic.008G094800 OsFBX125 - F-box domain containing protein, expressed -
11 Sobic.003G356300 cadmium tolerance factor, putative, expressed -
12 Sobic.010G090700 expressed protein -
13 Sobic.001G086400 OsMADS34 - MADS-box family gene with MIKCc type-box, expressed -
14 Sobic.007G088800 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
15 Sobic.010G194600 CW-type Zinc Finger, putative, expressed -
16 Sobic.003G031500 expressed protein -
17 Sobic.006G017600 DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
18 Sobic.009G042600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.001G500500 expressed protein -
20 Sobic.002G400300 expressed protein -


Gene co-expression network
sample Sobic001G152600 Sobic001G152600 Sobic008G161100 Sobic008G161100 Sobic001G152600--Sobic008G161100 Sobic001G163300 Sobic001G163300 Sobic001G152600--Sobic001G163300 Sobic001G137400 Sobic001G137400 Sobic001G152600--Sobic001G137400 Sobic005G202000 Sobic005G202000 Sobic001G152600--Sobic005G202000 Sobic003G191600 Sobic003G191600 Sobic001G152600--Sobic003G191600 Sobic003G207000 Sobic003G207000 Sobic001G152600--Sobic003G207000 Sobic001G217300 Sobic001G217300 Sobic001G152600--Sobic001G217300 Sobic005G166100 Sobic005G166100 Sobic001G152600--Sobic005G166100 Sobic008G098700 Sobic008G098700 Sobic001G152600--Sobic008G098700 Sobic008G161100--Sobic001G152600 Sobic008G161100--Sobic001G137400 Sobic007G193300 Sobic007G193300 Sobic008G161100--Sobic007G193300 Sobic008G161100--Sobic005G166100 Sobic001G137500 Sobic001G137500 Sobic008G161100--Sobic001G137500 Sobic005G164800 Sobic005G164800 Sobic008G161100--Sobic005G164800 Sobic001G288000 Sobic001G288000 Sobic008G161100--Sobic001G288000 Sobic002G259301 Sobic002G259301 Sobic008G161100--Sobic002G259301 Sobic001G457600 Sobic001G457600 Sobic008G161100--Sobic001G457600 Sobic001G163300--Sobic001G152600 Sobic001G163300--Sobic001G217300 Sobic003G017200 Sobic003G017200 Sobic001G163300--Sobic003G017200 Sobic001G316900 Sobic001G316900 Sobic001G163300--Sobic001G316900 Sobic008G010900 Sobic008G010900 Sobic001G163300--Sobic008G010900 Sobic006G200200 Sobic006G200200 Sobic001G163300--Sobic006G200200 Sobic008G094800 Sobic008G094800 Sobic001G163300--Sobic008G094800 Sobic003G144200 Sobic003G144200 Sobic001G163300--Sobic003G144200 Sobic006G017600 Sobic006G017600 Sobic001G163300--Sobic006G017600 Sobic001G137400--Sobic001G137500 Sobic002G258000 Sobic002G258000 Sobic001G137400--Sobic002G258000 Sobic001G137400--Sobic007G193300 Sobic001G137400--Sobic001G457600 Sobic010G194600 Sobic010G194600 Sobic001G137400--Sobic010G194600 Sobic001G137400--Sobic001G288000 Sobic009G243000 Sobic009G243000 Sobic001G137400--Sobic009G243000 Sobic001G086400 Sobic001G086400 Sobic001G137400--Sobic001G086400 Sobic001G419500 Sobic001G419500 Sobic001G137400--Sobic001G419500 Sobic005G202000--Sobic001G217300 Sobic005G202000--Sobic001G152600 Sobic005G172700 Sobic005G172700 Sobic005G202000--Sobic005G172700 Sobic004G149400 Sobic004G149400 Sobic005G202000--Sobic004G149400 Sobic005G202000--Sobic001G137400 Sobic003G022900 Sobic003G022900 Sobic005G202000--Sobic003G022900 Sobic005G202000--Sobic006G017600 Sobic007G127950 Sobic007G127950 Sobic005G202000--Sobic007G127950 Sobic003G049600 Sobic003G049600 Sobic005G202000--Sobic003G049600 Sobic003G191600--Sobic003G207000 Sobic010G183800 Sobic010G183800 Sobic003G191600--Sobic010G183800 Sobic003G092300 Sobic003G092300 Sobic003G191600--Sobic003G092300 Sobic003G191600--Sobic005G166100 Sobic001G463301 Sobic001G463301 Sobic003G191600--Sobic001G463301 Sobic001G459400 Sobic001G459400 Sobic003G191600--Sobic001G459400 Sobic001G158100 Sobic001G158100 Sobic003G191600--Sobic001G158100 Sobic003G300000 Sobic003G300000 Sobic003G191600--Sobic003G300000 Sobic007G033700 Sobic007G033700 Sobic003G191600--Sobic007G033700 Sobic003G207000--Sobic003G191600 Sobic003G207000--Sobic005G166100 Sobic009G063700 Sobic009G063700 Sobic003G207000--Sobic009G063700 Sobic003G207000--Sobic001G086400 Sobic003G207000--Sobic010G194600 Sobic003G207000--Sobic001G459400 Sobic003G207000--Sobic001G158100 Sobic003G207000--Sobic003G300000 Sobic009G075500 Sobic009G075500 Sobic003G207000--Sobic009G075500 Sobic001G217300--Sobic001G163300 Sobic001G217300--Sobic005G202000 Sobic003G031500 Sobic003G031500 Sobic001G217300--Sobic003G031500 Sobic001G217300--Sobic001G152600 Sobic001G217300--Sobic001G316900 Sobic004G262600 Sobic004G262600 Sobic001G217300--Sobic004G262600 Sobic003G356300 Sobic003G356300 Sobic001G217300--Sobic003G356300 Sobic003G223900 Sobic003G223900 Sobic001G217300--Sobic003G223900 Sobic006G203400 Sobic006G203400 Sobic001G217300--Sobic006G203400 Sobic001G216400 Sobic001G216400 Sobic005G166100--Sobic001G216400 Sobic004G056000 Sobic004G056000 Sobic005G166100--Sobic004G056000 Sobic005G166100--Sobic009G063700 Sobic007G128200 Sobic007G128200 Sobic005G166100--Sobic007G128200 Sobic003G381100 Sobic003G381100 Sobic005G166100--Sobic003G381100 Sobic005G166100--Sobic009G075500 Sobic005G166100--Sobic001G419500 Sobic005G166100--Sobic007G193300 Sobic006G097300 Sobic006G097300 Sobic005G166100--Sobic006G097300 Sobic006G215800 Sobic006G215800 Sobic008G098700--Sobic006G215800 Sobic002G299200 Sobic002G299200 Sobic008G098700--Sobic002G299200 Sobic003G090000 Sobic003G090000 Sobic008G098700--Sobic003G090000 Sobic009G152120 Sobic009G152120 Sobic008G098700--Sobic009G152120 Sobic003G027000 Sobic003G027000 Sobic008G098700--Sobic003G027000 Sobic001G500500 Sobic001G500500 Sobic008G098700--Sobic001G500500 Sobic010G090700 Sobic010G090700 Sobic008G098700--Sobic010G090700 Sobic002G106200 Sobic002G106200 Sobic008G098700--Sobic002G106200 Sobic003G396500 Sobic003G396500 Sobic008G098700--Sobic003G396500
Octagon: transcription factors


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