Gene annotation
Transcriptome id Sobic.003G031500.1
Synonym Sb03g002935
Functional annotation expressed protein
UniProt A0A1B6Q122
Pfam -
Panther DB PTHR37265
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G56880 : -
RAP-DB (Rice) LOC_Os01g09870.1 : expressed protein
MaizeGDB (Corn) Zm00025a023011
Brachypodium KQK03157
Barley -
Wheat TraesCS3B02G123200
Populus -


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cDNA sequences
Sobic.003G031500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G209600 DUF domain containing protein, expressed -
2 Sobic.001G217300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@auxin response factor 18, putative, expressed -
3 Sobic.003G153200 polygalacturonase, putative, expressed -
4 Sobic.001G152600 RIO1 family protein, expressed -
5 Sobic.001G157900 PLA IIIA/PLP7, putative, expressed -
6 Sobic.005G038000 expressed protein -
7 Sobic.004G262600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
8 Sobic.001G086400 OsMADS34 - MADS-box family gene with MIKCc type-box, expressed -
9 Sobic.001G061900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
10 Sobic.003G207000 expressed protein -
11 Sobic.001G009100 expressed protein -
12 Sobic.001G139300 expressed protein -
13 Sobic.005G202000 expressed protein -
14 Sobic.007G217800 expressed protein -
15 Sobic.001G152901 "YABBY transcription factor, "(PubMedID : 22581231) -
16 Sobic.003G223900 extra-large G-protein-related, putative, expressed -
17 Sobic.005G166100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
18 Sobic.001G215100 - -
19 Sobic.007G125600 expressed protein -
20 Sobic.001G032300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like receptor kinase, putative, expressed -


Gene co-expression network
sample Sobic003G031500 Sobic003G031500 Sobic001G209600 Sobic001G209600 Sobic003G031500--Sobic001G209600 Sobic001G217300 Sobic001G217300 Sobic003G031500--Sobic001G217300 Sobic003G153200 Sobic003G153200 Sobic003G031500--Sobic003G153200 Sobic001G152600 Sobic001G152600 Sobic003G031500--Sobic001G152600 Sobic001G157900 Sobic001G157900 Sobic003G031500--Sobic001G157900 Sobic005G038000 Sobic005G038000 Sobic003G031500--Sobic005G038000 Sobic004G262600 Sobic004G262600 Sobic003G031500--Sobic004G262600 Sobic001G086400 Sobic001G086400 Sobic003G031500--Sobic001G086400 Sobic001G061900 Sobic001G061900 Sobic003G031500--Sobic001G061900 Sobic001G209600--Sobic003G153200 Sobic004G321500 Sobic004G321500 Sobic001G209600--Sobic004G321500 Sobic001G209600--Sobic003G031500 Sobic003G443800 Sobic003G443800 Sobic001G209600--Sobic003G443800 Sobic010G121900 Sobic010G121900 Sobic001G209600--Sobic010G121900 Sobic004G029601 Sobic004G029601 Sobic001G209600--Sobic004G029601 Sobic008G161201 Sobic008G161201 Sobic001G209600--Sobic008G161201 Sobic006G253100 Sobic006G253100 Sobic001G209600--Sobic006G253100 Sobic005G189600 Sobic005G189600 Sobic001G209600--Sobic005G189600 Sobic001G163300 Sobic001G163300 Sobic001G217300--Sobic001G163300 Sobic005G202000 Sobic005G202000 Sobic001G217300--Sobic005G202000 Sobic001G217300--Sobic003G031500 Sobic001G217300--Sobic001G152600 Sobic001G316900 Sobic001G316900 Sobic001G217300--Sobic001G316900 Sobic001G217300--Sobic004G262600 Sobic003G356300 Sobic003G356300 Sobic001G217300--Sobic003G356300 Sobic003G223900 Sobic003G223900 Sobic001G217300--Sobic003G223900 Sobic006G203400 Sobic006G203400 Sobic001G217300--Sobic006G203400 Sobic001G009100 Sobic001G009100 Sobic003G153200--Sobic001G009100 Sobic007G217800 Sobic007G217800 Sobic003G153200--Sobic007G217800 Sobic003G153200--Sobic001G209600 Sobic003G153200--Sobic005G038000 Sobic004G195400 Sobic004G195400 Sobic003G153200--Sobic004G195400 Sobic003G285200 Sobic003G285200 Sobic003G153200--Sobic003G285200 Sobic004G314300 Sobic004G314300 Sobic003G153200--Sobic004G314300 Sobic008G135901 Sobic008G135901 Sobic003G153200--Sobic008G135901 Sobic006G189500 Sobic006G189500 Sobic003G153200--Sobic006G189500 Sobic008G161100 Sobic008G161100 Sobic001G152600--Sobic008G161100 Sobic001G152600--Sobic001G163300 Sobic001G137400 Sobic001G137400 Sobic001G152600--Sobic001G137400 Sobic001G152600--Sobic005G202000 Sobic003G191600 Sobic003G191600 Sobic001G152600--Sobic003G191600 Sobic003G207000 Sobic003G207000 Sobic001G152600--Sobic003G207000 Sobic001G152600--Sobic001G217300 Sobic005G166100 Sobic005G166100 Sobic001G152600--Sobic005G166100 Sobic008G098700 Sobic008G098700 Sobic001G152600--Sobic008G098700 Sobic001G157900--Sobic003G031500 Sobic006G120000 Sobic006G120000 Sobic001G157900--Sobic006G120000 Sobic001G157900--Sobic005G038000 Sobic005G070800 Sobic005G070800 Sobic001G157900--Sobic005G070800 Sobic001G157900--Sobic001G009100 Sobic001G515800 Sobic001G515800 Sobic001G157900--Sobic001G515800 Sobic006G163200 Sobic006G163200 Sobic001G157900--Sobic006G163200 Sobic010G246400 Sobic010G246400 Sobic001G157900--Sobic010G246400 Sobic003G015950 Sobic003G015950 Sobic001G157900--Sobic003G015950 Sobic008G122300 Sobic008G122300 Sobic005G038000--Sobic008G122300 Sobic001G341200 Sobic001G341200 Sobic005G038000--Sobic001G341200 Sobic001G209701 Sobic001G209701 Sobic005G038000--Sobic001G209701 Sobic003G410700 Sobic003G410700 Sobic004G262600--Sobic003G410700 Sobic004G262600--Sobic003G223900 Sobic004G261200 Sobic004G261200 Sobic004G262600--Sobic004G261200 Sobic009G188800 Sobic009G188800 Sobic004G262600--Sobic009G188800 Sobic003G399000 Sobic003G399000 Sobic004G262600--Sobic003G399000 Sobic009G194200 Sobic009G194200 Sobic004G262600--Sobic009G194200 Sobic004G262600--Sobic001G217300 Sobic001G139300 Sobic001G139300 Sobic004G262600--Sobic001G139300 Sobic003G017200 Sobic003G017200 Sobic004G262600--Sobic003G017200 Sobic002G263000 Sobic002G263000 Sobic001G086400--Sobic002G263000 Sobic001G086400--Sobic003G207000 Sobic001G137800 Sobic001G137800 Sobic001G086400--Sobic001G137800 Sobic010G194600 Sobic010G194600 Sobic001G086400--Sobic010G194600 Sobic001G086400--Sobic001G137400 Sobic002G121900 Sobic002G121900 Sobic001G086400--Sobic002G121900 Sobic002G053350 Sobic002G053350 Sobic001G086400--Sobic002G053350 Sobic007G128200 Sobic007G128200 Sobic001G086400--Sobic007G128200 Sobic001G171200 Sobic001G171200 Sobic001G086400--Sobic001G171200 Sobic001G061900--Sobic001G316900 Sobic010G008600 Sobic010G008600 Sobic001G061900--Sobic010G008600 Sobic001G061900--Sobic009G194200 Sobic001G321800 Sobic001G321800 Sobic001G061900--Sobic001G321800 Sobic002G068800 Sobic002G068800 Sobic001G061900--Sobic002G068800 Sobic001G061900--Sobic001G515800 Sobic007G223200 Sobic007G223200 Sobic001G061900--Sobic007G223200 Sobic003G424300 Sobic003G424300 Sobic001G061900--Sobic003G424300 Sobic001G061900--Sobic001G217300
Octagon: transcription factors


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