Gene annotation
Transcriptome id Sobic.003G223900.1
Synonym Sb03g028220
Functional annotation extra-large G-protein-related, putative, expressed
UniProt C5XR49
Pfam PF11331
Panther DB PTHR31105 PTHR31105:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G61670 : Protein of unknown function (DUF3133)
RAP-DB (Rice) LOC_Os01g43330.1 : extra-large G-protein-related, putative, expressed
MaizeGDB (Corn) Zm00025a036739 , Zm00025a028384 , Zm00025a038554
Brachypodium KQK08779 , KQK08778
Barley HORVU3Hr1G055550.5 , HORVU3Hr1G055550.4 , HORVU3Hr1G055550.6 , HORVU3Hr1G055550.1 , HORVU3Hr1G055550.3 , HORVU3Hr1G055550.2
Wheat TraesCS1A02G425200 , TraesCS1A02G425200 , TraesCS3B02G253700 , TraesCS3B02G253700 , TraesCS3B02G253700 , TraesCS1D02G434200 , TraesCS1D02G434200 , TraesCS3A02G224200 , TraesCS3A02G224200 , TraesCS3A02G224200 , TraesCS3D02G229400 , TraesCS3D02G229400 , TraesCS1B02G459600 , TraesCS1B02G459600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G262600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
2 Sobic.004G234300 DUF581 domain containing protein, expressed -
3 Sobic.002G270800 amino acid transporter, putative, expressed -
4 Sobic.003G410700 exostosin family domain containing protein, expressed -
5 Sobic.001G139300 expressed protein -
6 Sobic.004G336100 ribonucleoside-diphosphate reductase large subunit, putative, expressed K10807: ribonucleoside-diphosphate reductase subunit M1
7 Sobic.001G217300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@auxin response factor 18, putative, expressed -
8 Sobic.003G017200 osFTL1 FT-Like1 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
9 Sobic.002G257900 Highest expression level in primordial inflorescence(PubMedID : 27501690)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@"GW8/OsPL16(Ortholog in rice:Wang et al., 2012)"(PubMedID : 31659857)@OsSPL18 - SBP-box gene family member, expressed -
10 Sobic.001G307200 exonuclease, putative, expressed -
11 Sobic.001G450800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
12 Sobic.006G199700 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
13 Sobic.010G033300 myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed K10781: fatty acyl-ACP thioesterase B
14 Sobic.001G106000 homeobox protein knotted-1, putative, expressed -
15 Sobic.010G150200 OsFBX209 - F-box domain containing protein, expressed -
16 Sobic.003G435400 OsDegp14 - Putative Deg protease homologue, expressed -
17 Sobic.002G400300 expressed protein -
18 Sobic.004G257350 - -
19 Sobic.010G186500 targeting protein for Xklp2, putative, expressed -
20 Sobic.005G125000 ATP binding protein, putative, expressed K17592: sacsin


Gene co-expression network
sample Sobic003G223900 Sobic003G223900 Sobic004G262600 Sobic004G262600 Sobic003G223900--Sobic004G262600 Sobic004G234300 Sobic004G234300 Sobic003G223900--Sobic004G234300 Sobic002G270800 Sobic002G270800 Sobic003G223900--Sobic002G270800 Sobic003G410700 Sobic003G410700 Sobic003G223900--Sobic003G410700 Sobic001G139300 Sobic001G139300 Sobic003G223900--Sobic001G139300 Sobic004G336100 Sobic004G336100 Sobic003G223900--Sobic004G336100 Sobic001G217300 Sobic001G217300 Sobic003G223900--Sobic001G217300 Sobic003G017200 Sobic003G017200 Sobic003G223900--Sobic003G017200 Sobic002G257900 Sobic002G257900 Sobic003G223900--Sobic002G257900 Sobic004G262600--Sobic003G410700 Sobic004G262600--Sobic003G223900 Sobic004G261200 Sobic004G261200 Sobic004G262600--Sobic004G261200 Sobic009G188800 Sobic009G188800 Sobic004G262600--Sobic009G188800 Sobic003G399000 Sobic003G399000 Sobic004G262600--Sobic003G399000 Sobic009G194200 Sobic009G194200 Sobic004G262600--Sobic009G194200 Sobic004G262600--Sobic001G217300 Sobic004G262600--Sobic001G139300 Sobic004G262600--Sobic003G017200 Sobic004G234300--Sobic003G223900 Sobic010G222900 Sobic010G222900 Sobic004G234300--Sobic010G222900 Sobic010G150200 Sobic010G150200 Sobic004G234300--Sobic010G150200 Sobic004G040800 Sobic004G040800 Sobic004G234300--Sobic004G040800 Sobic001G493500 Sobic001G493500 Sobic004G234300--Sobic001G493500 Sobic002G239900 Sobic002G239900 Sobic004G234300--Sobic002G239900 Sobic010G011900 Sobic010G011900 Sobic004G234300--Sobic010G011900 Sobic009G201500 Sobic009G201500 Sobic004G234300--Sobic009G201500 Sobic010G077300 Sobic010G077300 Sobic004G234300--Sobic010G077300 Sobic002G270800--Sobic003G223900 Sobic004G305200 Sobic004G305200 Sobic002G270800--Sobic004G305200 Sobic009G120600 Sobic009G120600 Sobic002G270800--Sobic009G120600 Sobic010G066400 Sobic010G066400 Sobic002G270800--Sobic010G066400 Sobic002G270800--Sobic004G262600 Sobic010G248000 Sobic010G248000 Sobic002G270800--Sobic010G248000 Sobic003G327600 Sobic003G327600 Sobic002G270800--Sobic003G327600 Sobic004G049200 Sobic004G049200 Sobic002G270800--Sobic004G049200 Sobic003G252500 Sobic003G252500 Sobic002G270800--Sobic003G252500 Sobic003G410700--Sobic004G262600 Sobic003G410700--Sobic004G261200 Sobic003G410700--Sobic009G194200 Sobic003G389100 Sobic003G389100 Sobic003G410700--Sobic003G389100 Sobic004G296200 Sobic004G296200 Sobic003G410700--Sobic004G296200 Sobic003G094600 Sobic003G094600 Sobic003G410700--Sobic003G094600 Sobic001G440500 Sobic001G440500 Sobic003G410700--Sobic001G440500 Sobic003G410700--Sobic003G223900 Sobic001G436100 Sobic001G436100 Sobic003G410700--Sobic001G436100 Sobic001G139300--Sobic003G410700 Sobic001G139300--Sobic003G223900 Sobic001G139300--Sobic004G262600 Sobic001G139300--Sobic009G188800 Sobic004G218900 Sobic004G218900 Sobic001G139300--Sobic004G218900 Sobic001G139300--Sobic004G234300 Sobic001G312600 Sobic001G312600 Sobic001G139300--Sobic001G312600 Sobic002G206700 Sobic002G206700 Sobic001G139300--Sobic002G206700 Sobic003G390700 Sobic003G390700 Sobic001G139300--Sobic003G390700 Sobic006G179300 Sobic006G179300 Sobic004G336100--Sobic006G179300 Sobic010G025000 Sobic010G025000 Sobic004G336100--Sobic010G025000 Sobic004G336100--Sobic003G223900 Sobic004G336100--Sobic001G217300 Sobic004G277400 Sobic004G277400 Sobic004G336100--Sobic004G277400 Sobic005G125000 Sobic005G125000 Sobic004G336100--Sobic005G125000 Sobic003G360300 Sobic003G360300 Sobic004G336100--Sobic003G360300 Sobic003G356300 Sobic003G356300 Sobic004G336100--Sobic003G356300 Sobic002G203500 Sobic002G203500 Sobic004G336100--Sobic002G203500 Sobic001G163300 Sobic001G163300 Sobic001G217300--Sobic001G163300 Sobic005G202000 Sobic005G202000 Sobic001G217300--Sobic005G202000 Sobic003G031500 Sobic003G031500 Sobic001G217300--Sobic003G031500 Sobic001G152600 Sobic001G152600 Sobic001G217300--Sobic001G152600 Sobic001G316900 Sobic001G316900 Sobic001G217300--Sobic001G316900 Sobic001G217300--Sobic004G262600 Sobic001G217300--Sobic003G356300 Sobic001G217300--Sobic003G223900 Sobic006G203400 Sobic006G203400 Sobic001G217300--Sobic006G203400 Sobic001G106000 Sobic001G106000 Sobic003G017200--Sobic001G106000 Sobic003G040800 Sobic003G040800 Sobic003G017200--Sobic003G040800 Sobic002G342100 Sobic002G342100 Sobic003G017200--Sobic002G342100 Sobic007G153001 Sobic007G153001 Sobic003G017200--Sobic007G153001 Sobic006G200200 Sobic006G200200 Sobic003G017200--Sobic006G200200 Sobic009G128300 Sobic009G128300 Sobic003G017200--Sobic009G128300 Sobic003G144200 Sobic003G144200 Sobic003G017200--Sobic003G144200 Sobic003G083000 Sobic003G083000 Sobic003G017200--Sobic003G083000 Sobic002G182800 Sobic002G182800 Sobic003G017200--Sobic002G182800 Sobic002G257900--Sobic003G017200 Sobic001G145100 Sobic001G145100 Sobic002G257900--Sobic001G145100 Sobic002G257900--Sobic001G106000 Sobic003G378000 Sobic003G378000 Sobic002G257900--Sobic003G378000 Sobic002G257900--Sobic003G223900 Sobic001G106200 Sobic001G106200 Sobic002G257900--Sobic001G106200 Sobic002G257900--Sobic003G144200 Sobic010G033300 Sobic010G033300 Sobic002G257900--Sobic010G033300 Sobic002G257900--Sobic001G163300
Octagon: transcription factors


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