Gene annotation
Transcriptome id Sobic.005G125000.1
Synonym Sb05g018540
Functional annotation ATP binding protein, putative, expressed
UniProt A0A1Z5RIA7
Pfam -
Panther DB PTHR32387 PTHR32387:SF3
NCBI CDD -
KEGG Orthology K17592; sacsin
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48770 : DNA binding;ATP binding
RAP-DB (Rice) LOC_Os11g31480.1 : ATP binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a015753
Brachypodium PNT63606
Barley HORVU5Hr1G085220.27 , HORVU5Hr1G085220.28 , HORVU5Hr1G085220.26 , HORVU5Hr1G085220.25 , HORVU5Hr1G085220.24 , HORVU5Hr1G085220.39 , HORVU5Hr1G085220.36 , HORVU5Hr1G085220.37 , HORVU5Hr1G085220.30 , HORVU5Hr1G085220.35
Wheat TraesCS2A02G479300 , TraesCS5B02G338300 , TraesCS2B02G503700 , TraesCS5A02G339700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G066700 OsFBX164 - F-box domain containing protein, expressed -
2 Sobic.001G137600 ankyrin, putative, expressed -
3 Sobic.007G128100 expressed protein -
4 Sobic.007G070200 tentative name(PubMedID : 31536532)@OsFBX265 - F-box domain containing protein, expressed -
5 Sobic.007G033700 OsFBX309 - F-box domain containing protein, expressed -
6 Sobic.003G027800 protein kinase family protein, putative, expressed -
7 Sobic.007G161600 SET domain containing protein, expressed -
8 Sobic.004G220200 expressed protein -
9 Sobic.010G276600 PAZ domain containing protein, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
10 Sobic.007G023100 CCT motif family protein, expressed -
11 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
12 Sobic.002G205000 ZOS9-06 - C2H2 zinc finger protein, expressed -
13 Sobic.004G149400 ankyrin, putative, expressed -
14 Sobic.010G173700 tetraspanin family protein, putative, expressed -
15 Sobic.003G090600 seven in absentia protein family protein, putative, expressed -
16 Sobic.004G313500 acetyltransferase, GNAT family, putative, expressed -
17 Sobic.005G162900 dnaJ domain containing protein, expressed -
18 Sobic.007G164200 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@expressed protein -
19 Sobic.001G211500 LIG1 - Putative DNA ligase I, expressed K10747: DNA ligase 1
20 Sobic.007G127950 - -


Gene co-expression network
sample Sobic005G125000 Sobic005G125000 Sobic003G066700 Sobic003G066700 Sobic005G125000--Sobic003G066700 Sobic001G137600 Sobic001G137600 Sobic005G125000--Sobic001G137600 Sobic007G128100 Sobic007G128100 Sobic005G125000--Sobic007G128100 Sobic007G070200 Sobic007G070200 Sobic005G125000--Sobic007G070200 Sobic007G033700 Sobic007G033700 Sobic005G125000--Sobic007G033700 Sobic003G027800 Sobic003G027800 Sobic005G125000--Sobic003G027800 Sobic007G161600 Sobic007G161600 Sobic005G125000--Sobic007G161600 Sobic004G220200 Sobic004G220200 Sobic005G125000--Sobic004G220200 Sobic010G276600 Sobic010G276600 Sobic005G125000--Sobic010G276600 Sobic003G066700--Sobic005G125000 Sobic003G092500 Sobic003G092500 Sobic003G066700--Sobic003G092500 Sobic001G043500 Sobic001G043500 Sobic003G066700--Sobic001G043500 Sobic001G186600 Sobic001G186600 Sobic003G066700--Sobic001G186600 Sobic007G116000 Sobic007G116000 Sobic003G066700--Sobic007G116000 Sobic009G141700 Sobic009G141700 Sobic003G066700--Sobic009G141700 Sobic003G066700--Sobic010G276600 Sobic002G205000 Sobic002G205000 Sobic003G066700--Sobic002G205000 Sobic004G233600 Sobic004G233600 Sobic003G066700--Sobic004G233600 Sobic001G137600--Sobic007G033700 Sobic006G271600 Sobic006G271600 Sobic001G137600--Sobic006G271600 Sobic009G243000 Sobic009G243000 Sobic001G137600--Sobic009G243000 Sobic003G046400 Sobic003G046400 Sobic001G137600--Sobic003G046400 Sobic001G455900 Sobic001G455900 Sobic001G137600--Sobic001G455900 Sobic003G117200 Sobic003G117200 Sobic001G137600--Sobic003G117200 Sobic006G163300 Sobic006G163300 Sobic001G137600--Sobic006G163300 Sobic001G071600 Sobic001G071600 Sobic001G137600--Sobic001G071600 Sobic010G194600 Sobic010G194600 Sobic001G137600--Sobic010G194600 Sobic007G023100 Sobic007G023100 Sobic007G128100--Sobic007G023100 Sobic005G062600 Sobic005G062600 Sobic007G128100--Sobic005G062600 Sobic007G128100--Sobic007G161600 Sobic008G038200 Sobic008G038200 Sobic007G128100--Sobic008G038200 Sobic001G298800 Sobic001G298800 Sobic007G128100--Sobic001G298800 Sobic007G128100--Sobic003G027800 Sobic003G019900 Sobic003G019900 Sobic007G128100--Sobic003G019900 Sobic008G151600 Sobic008G151600 Sobic007G128100--Sobic008G151600 Sobic003G008800 Sobic003G008800 Sobic007G128100--Sobic003G008800 Sobic007G070200--Sobic007G023100 Sobic007G070200--Sobic001G137600 Sobic003G406600 Sobic003G406600 Sobic007G070200--Sobic003G406600 Sobic004G352100 Sobic004G352100 Sobic007G070200--Sobic004G352100 Sobic007G070200--Sobic005G125000 Sobic007G070200--Sobic010G276600 Sobic006G046600 Sobic006G046600 Sobic007G070200--Sobic006G046600 Sobic003G010700 Sobic003G010700 Sobic007G070200--Sobic003G010700 Sobic007G070200--Sobic007G033700 Sobic007G033700--Sobic003G046400 Sobic007G033700--Sobic009G243000 Sobic007G033700--Sobic001G137600 Sobic007G033700--Sobic001G455900 Sobic007G033700--Sobic006G163300 Sobic010G070900 Sobic010G070900 Sobic007G033700--Sobic010G070900 Sobic007G033700--Sobic006G271600 Sobic007G033700--Sobic001G071600 Sobic004G237000 Sobic004G237000 Sobic007G033700--Sobic004G237000 Sobic002G219900 Sobic002G219900 Sobic003G027800--Sobic002G219900 Sobic008G169400 Sobic008G169400 Sobic003G027800--Sobic008G169400 Sobic003G027800--Sobic007G128100 Sobic003G027800--Sobic008G038200 Sobic005G032600 Sobic005G032600 Sobic003G027800--Sobic005G032600 Sobic009G167100 Sobic009G167100 Sobic003G027800--Sobic009G167100 Sobic009G031500 Sobic009G031500 Sobic003G027800--Sobic009G031500 Sobic001G113800 Sobic001G113800 Sobic003G027800--Sobic001G113800 Sobic006G179300 Sobic006G179300 Sobic003G027800--Sobic006G179300 Sobic007G161600--Sobic008G151600 Sobic007G161600--Sobic005G062600 Sobic007G147200 Sobic007G147200 Sobic007G161600--Sobic007G147200 Sobic007G161600--Sobic001G043500 Sobic007G161600--Sobic003G019900 Sobic010G092400 Sobic010G092400 Sobic007G161600--Sobic010G092400 Sobic007G161600--Sobic006G163300 Sobic007G161600--Sobic003G008800 Sobic007G161600--Sobic003G046400 Sobic001G171200 Sobic001G171200 Sobic004G220200--Sobic001G171200 Sobic001G137400 Sobic001G137400 Sobic004G220200--Sobic001G137400 Sobic004G220200--Sobic009G243000 Sobic004G234600 Sobic004G234600 Sobic004G220200--Sobic004G234600 Sobic001G086400 Sobic001G086400 Sobic004G220200--Sobic001G086400 Sobic004G220200--Sobic010G194600 Sobic004G220200--Sobic006G163300 Sobic002G053350 Sobic002G053350 Sobic004G220200--Sobic002G053350 Sobic004G220200--Sobic001G137600 Sobic010G276600--Sobic003G010700 Sobic010G168700 Sobic010G168700 Sobic010G276600--Sobic010G168700 Sobic006G273600 Sobic006G273600 Sobic010G276600--Sobic006G273600 Sobic005G199700 Sobic005G199700 Sobic010G276600--Sobic005G199700 Sobic007G170100 Sobic007G170100 Sobic010G276600--Sobic007G170100 Sobic003G338700 Sobic003G338700 Sobic010G276600--Sobic003G338700 Sobic001G379900 Sobic001G379900 Sobic010G276600--Sobic001G379900 Sobic010G276600--Sobic006G163300 Sobic001G286700 Sobic001G286700 Sobic010G276600--Sobic001G286700
Octagon: transcription factors


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