Gene annotation
Transcriptome id Sobic.007G164200.2
Synonym Sb07g023750
Functional annotation expressed high in CK60 (an inefficient nitrogen user) (PubMedID : 28697783)
expressed protein
UniProt A0A1Z5RA93
Pfam PF07762
Panther DB PTHR33086 PTHR33086:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g38880.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.007G164200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G125000 ATP binding protein, putative, expressed K17592: sacsin
2 Sobic.003G207300 OsFBD3 - F-box and FBD domain containing protein, expressed -
3 Sobic.010G235700 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
4 Sobic.004G020100 division protein, putative, expressed -
5 Sobic.001G229300 expressed protein -
6 Sobic.009G032200 DNA methyltransferase protein, putative, expressed -
7 Sobic.002G336200 nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
8 Sobic.001G146301 - -
9 Sobic.010G227000 pentatricopeptide, putative, expressed -
10 Sobic.003G360300 exostosin family domain containing protein, expressed -
11 Sobic.004G172500 expressed protein -
12 Sobic.002G239601 - -
13 Sobic.004G354100 OsSigP5 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/His catalytic dyad, expressed K13280: SEC11, signal peptidase I
14 Sobic.006G255900 tubulin/FtsZ domain containing protein, putative, expressed K03531: cell division protein FtsZ
15 Sobic.010G240800 REV1, putative, expressed K03515: DNA repair protein REV1
16 Sobic.003G272700 transmembrane protein 16K, putative, expressed -
17 Sobic.001G123600 domain of unknown function, DUF250 domain containing protein, expressed -
18 Sobic.010G041100 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
19 Sobic.004G313500 acetyltransferase, GNAT family, putative, expressed -
20 Sobic.007G159200 PWWP domain containing protein, expressed -


Gene co-expression network
sample Sobic007G164200 Sobic007G164200 Sobic005G125000 Sobic005G125000 Sobic007G164200--Sobic005G125000 Sobic003G207300 Sobic003G207300 Sobic007G164200--Sobic003G207300 Sobic010G235700 Sobic010G235700 Sobic007G164200--Sobic010G235700 Sobic004G020100 Sobic004G020100 Sobic007G164200--Sobic004G020100 Sobic001G229300 Sobic001G229300 Sobic007G164200--Sobic001G229300 Sobic009G032200 Sobic009G032200 Sobic007G164200--Sobic009G032200 Sobic002G336200 Sobic002G336200 Sobic007G164200--Sobic002G336200 Sobic001G146301 Sobic001G146301 Sobic007G164200--Sobic001G146301 Sobic010G227000 Sobic010G227000 Sobic007G164200--Sobic010G227000 Sobic003G066700 Sobic003G066700 Sobic005G125000--Sobic003G066700 Sobic001G137600 Sobic001G137600 Sobic005G125000--Sobic001G137600 Sobic007G128100 Sobic007G128100 Sobic005G125000--Sobic007G128100 Sobic007G070200 Sobic007G070200 Sobic005G125000--Sobic007G070200 Sobic007G033700 Sobic007G033700 Sobic005G125000--Sobic007G033700 Sobic003G027800 Sobic003G027800 Sobic005G125000--Sobic003G027800 Sobic007G161600 Sobic007G161600 Sobic005G125000--Sobic007G161600 Sobic004G220200 Sobic004G220200 Sobic005G125000--Sobic004G220200 Sobic010G276600 Sobic010G276600 Sobic005G125000--Sobic010G276600 Sobic010G041000 Sobic010G041000 Sobic003G207300--Sobic010G041000 Sobic007G159200 Sobic007G159200 Sobic003G207300--Sobic007G159200 Sobic004G111000 Sobic004G111000 Sobic003G207300--Sobic004G111000 Sobic003G207300--Sobic002G336200 Sobic003G361400 Sobic003G361400 Sobic003G207300--Sobic003G361400 Sobic001G502600 Sobic001G502600 Sobic003G207300--Sobic001G502600 Sobic004G118800 Sobic004G118800 Sobic003G207300--Sobic004G118800 Sobic002G219900 Sobic002G219900 Sobic003G207300--Sobic002G219900 Sobic003G098900 Sobic003G098900 Sobic003G207300--Sobic003G098900 Sobic004G278900 Sobic004G278900 Sobic010G235700--Sobic004G278900 Sobic003G010900 Sobic003G010900 Sobic010G235700--Sobic003G010900 Sobic007G081900 Sobic007G081900 Sobic010G235700--Sobic007G081900 Sobic004G241600 Sobic004G241600 Sobic010G235700--Sobic004G241600 Sobic001G123600 Sobic001G123600 Sobic010G235700--Sobic001G123600 Sobic010G235700--Sobic009G032200 Sobic006G091000 Sobic006G091000 Sobic010G235700--Sobic006G091000 Sobic002G430900 Sobic002G430900 Sobic010G235700--Sobic002G430900 Sobic010G269300 Sobic010G269300 Sobic010G235700--Sobic010G269300 Sobic004G020100--Sobic003G010900 Sobic004G020100--Sobic001G123600 Sobic002G076500 Sobic002G076500 Sobic004G020100--Sobic002G076500 Sobic004G020100--Sobic001G229300 Sobic004G020100--Sobic009G032200 Sobic003G432800 Sobic003G432800 Sobic004G020100--Sobic003G432800 Sobic001G051400 Sobic001G051400 Sobic004G020100--Sobic001G051400 Sobic002G296400 Sobic002G296400 Sobic004G020100--Sobic002G296400 Sobic006G191200 Sobic006G191200 Sobic004G020100--Sobic006G191200 Sobic001G229300--Sobic001G123600 Sobic003G129300 Sobic003G129300 Sobic001G229300--Sobic003G129300 Sobic004G354100 Sobic004G354100 Sobic001G229300--Sobic004G354100 Sobic004G256300 Sobic004G256300 Sobic001G229300--Sobic004G256300 Sobic001G229300--Sobic003G010900 Sobic002G066800 Sobic002G066800 Sobic001G229300--Sobic002G066800 Sobic003G222700 Sobic003G222700 Sobic001G229300--Sobic003G222700 Sobic002G142700 Sobic002G142700 Sobic001G229300--Sobic002G142700 Sobic006G106600 Sobic006G106600 Sobic001G229300--Sobic006G106600 Sobic010G236200 Sobic010G236200 Sobic009G032200--Sobic010G236200 Sobic010G233000 Sobic010G233000 Sobic009G032200--Sobic010G233000 Sobic009G032200--Sobic010G269300 Sobic004G043750 Sobic004G043750 Sobic009G032200--Sobic004G043750 Sobic008G057000 Sobic008G057000 Sobic009G032200--Sobic008G057000 Sobic009G257500 Sobic009G257500 Sobic009G032200--Sobic009G257500 Sobic003G221500 Sobic003G221500 Sobic009G032200--Sobic003G221500 Sobic010G215900 Sobic010G215900 Sobic009G032200--Sobic010G215900 Sobic001G135500 Sobic001G135500 Sobic009G032200--Sobic001G135500 Sobic008G164700 Sobic008G164700 Sobic002G336200--Sobic008G164700 Sobic002G336200--Sobic008G057000 Sobic006G118300 Sobic006G118300 Sobic002G336200--Sobic006G118300 Sobic002G336200--Sobic003G207300 Sobic003G217200 Sobic003G217200 Sobic002G336200--Sobic003G217200 Sobic005G108000 Sobic005G108000 Sobic002G336200--Sobic005G108000 Sobic001G245900 Sobic001G245900 Sobic002G336200--Sobic001G245900 Sobic002G060600 Sobic002G060600 Sobic002G336200--Sobic002G060600 Sobic001G542450 Sobic001G542450 Sobic002G336200--Sobic001G542450 Sobic003G177000 Sobic003G177000 Sobic001G146301--Sobic003G177000 Sobic001G146301--Sobic007G159200 Sobic002G425200 Sobic002G425200 Sobic001G146301--Sobic002G425200 Sobic008G038200 Sobic008G038200 Sobic001G146301--Sobic008G038200 Sobic001G300000 Sobic001G300000 Sobic001G146301--Sobic001G300000 Sobic001G146301--Sobic004G118800 Sobic001G146301--Sobic007G128100 Sobic003G311500 Sobic003G311500 Sobic001G146301--Sobic003G311500 Sobic001G146301--Sobic007G161600 Sobic010G227000--Sobic010G269300 Sobic007G034200 Sobic007G034200 Sobic010G227000--Sobic007G034200 Sobic010G227000--Sobic001G123600 Sobic009G120400 Sobic009G120400 Sobic010G227000--Sobic009G120400 Sobic008G080500 Sobic008G080500 Sobic010G227000--Sobic008G080500 Sobic003G299500 Sobic003G299500 Sobic010G227000--Sobic003G299500 Sobic006G280100 Sobic006G280100 Sobic010G227000--Sobic006G280100 Sobic001G211500 Sobic001G211500 Sobic010G227000--Sobic001G211500 Sobic003G360300 Sobic003G360300 Sobic010G227000--Sobic003G360300
Octagon: transcription factors


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