Gene annotation
Transcriptome id Sobic.001G146301.1
Synonym -
Functional annotation -
UniProt A0A1Z5S608
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G177000 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
2 Sobic.007G159200 PWWP domain containing protein, expressed -
3 Sobic.002G425200 expressed protein -
4 Sobic.008G038200 TKL_IRAK_CR4L.1 - The CR4L subfamily has homology with Crinkly4, expressed -
5 Sobic.001G300000 - -
6 Sobic.004G118800 receptor lectin kinase like protein, putative, expressed -
7 Sobic.007G128100 expressed protein -
8 Sobic.003G311500 double-stranded RNA binding motif containing protein, expressed -
9 Sobic.007G161600 SET domain containing protein, expressed -
10 Sobic.007G065300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
11 Sobic.003G207300 OsFBD3 - F-box and FBD domain containing protein, expressed -
12 Sobic.001G397800 TOPBP1C - Similar to DNA replication protein TOPBP1 from, expressed K10728: topoisomerase (DNA) II binding protein 1
13 Sobic.006G223300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
14 Sobic.002G203500 protein binding protein, putative, expressed -
15 Sobic.002G233800 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
16 Sobic.001G541000 MYB family transcription factor, putative, expressed K11111: TERF2, telomeric repeat-binding factor 2
17 Sobic.001G300900 expansin precursor, putative, expressed -
18 Sobic.006G225100 OsFBDUF17 - F-box and DUF domain containing protein, expressed -
19 Sobic.007G076200 VERNALIZATION-INSENSITIVE, putative, expressed -
20 Sobic.007G164200 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@expressed protein -


Gene co-expression network
sample Sobic001G146301 Sobic001G146301 Sobic003G177000 Sobic003G177000 Sobic001G146301--Sobic003G177000 Sobic007G159200 Sobic007G159200 Sobic001G146301--Sobic007G159200 Sobic002G425200 Sobic002G425200 Sobic001G146301--Sobic002G425200 Sobic008G038200 Sobic008G038200 Sobic001G146301--Sobic008G038200 Sobic001G300000 Sobic001G300000 Sobic001G146301--Sobic001G300000 Sobic004G118800 Sobic004G118800 Sobic001G146301--Sobic004G118800 Sobic007G128100 Sobic007G128100 Sobic001G146301--Sobic007G128100 Sobic003G311500 Sobic003G311500 Sobic001G146301--Sobic003G311500 Sobic007G161600 Sobic007G161600 Sobic001G146301--Sobic007G161600 Sobic003G177000--Sobic002G425200 Sobic003G177000--Sobic008G038200 Sobic003G177000--Sobic001G300000 Sobic001G541000 Sobic001G541000 Sobic003G177000--Sobic001G541000 Sobic003G177000--Sobic007G161600 Sobic006G280100 Sobic006G280100 Sobic003G177000--Sobic006G280100 Sobic001G523700 Sobic001G523700 Sobic003G177000--Sobic001G523700 Sobic003G177000--Sobic007G159200 Sobic008G045000 Sobic008G045000 Sobic003G177000--Sobic008G045000 Sobic008G080500 Sobic008G080500 Sobic007G159200--Sobic008G080500 Sobic001G248100 Sobic001G248100 Sobic007G159200--Sobic001G248100 Sobic007G159200--Sobic006G280100 Sobic010G051400 Sobic010G051400 Sobic007G159200--Sobic010G051400 Sobic004G355800 Sobic004G355800 Sobic007G159200--Sobic004G355800 Sobic007G159200--Sobic002G425200 Sobic010G262100 Sobic010G262100 Sobic007G159200--Sobic010G262100 Sobic007G159200--Sobic001G300000 Sobic009G007700 Sobic009G007700 Sobic007G159200--Sobic009G007700 Sobic002G425200--Sobic003G177000 Sobic002G425200--Sobic007G159200 Sobic002G425200--Sobic008G038200 Sobic008G088842 Sobic008G088842 Sobic002G425200--Sobic008G088842 Sobic002G425200--Sobic006G280100 Sobic004G199200 Sobic004G199200 Sobic002G425200--Sobic004G199200 Sobic006G067700 Sobic006G067700 Sobic002G425200--Sobic006G067700 Sobic002G425200--Sobic008G080500 Sobic006G112700 Sobic006G112700 Sobic002G425200--Sobic006G112700 Sobic007G065300 Sobic007G065300 Sobic008G038200--Sobic007G065300 Sobic002G098500 Sobic002G098500 Sobic008G038200--Sobic002G098500 Sobic001G298800 Sobic001G298800 Sobic008G038200--Sobic001G298800 Sobic003G096300 Sobic003G096300 Sobic008G038200--Sobic003G096300 Sobic001G518000 Sobic001G518000 Sobic008G038200--Sobic001G518000 Sobic006G241800 Sobic006G241800 Sobic008G038200--Sobic006G241800 Sobic008G038200--Sobic003G177000 Sobic010G135300 Sobic010G135300 Sobic008G038200--Sobic010G135300 Sobic008G038200--Sobic007G128100 Sobic001G300000--Sobic003G177000 Sobic001G300000--Sobic001G541000 Sobic007G209600 Sobic007G209600 Sobic001G300000--Sobic007G209600 Sobic001G300000--Sobic007G159200 Sobic007G184100 Sobic007G184100 Sobic001G300000--Sobic007G184100 Sobic001G300000--Sobic008G080500 Sobic001G300000--Sobic006G280100 Sobic003G135500 Sobic003G135500 Sobic001G300000--Sobic003G135500 Sobic001G211500 Sobic001G211500 Sobic001G300000--Sobic001G211500 Sobic001G371700 Sobic001G371700 Sobic004G118800--Sobic001G371700 Sobic008G101900 Sobic008G101900 Sobic004G118800--Sobic008G101900 Sobic002G001100 Sobic002G001100 Sobic004G118800--Sobic002G001100 Sobic004G118800--Sobic008G038200 Sobic004G118800--Sobic003G177000 Sobic008G078000 Sobic008G078000 Sobic004G118800--Sobic008G078000 Sobic005G017000 Sobic005G017000 Sobic004G118800--Sobic005G017000 Sobic004G118800--Sobic001G298800 Sobic004G118800--Sobic002G425200 Sobic007G023100 Sobic007G023100 Sobic007G128100--Sobic007G023100 Sobic005G062600 Sobic005G062600 Sobic007G128100--Sobic005G062600 Sobic007G128100--Sobic007G161600 Sobic007G128100--Sobic008G038200 Sobic007G128100--Sobic001G298800 Sobic003G027800 Sobic003G027800 Sobic007G128100--Sobic003G027800 Sobic003G019900 Sobic003G019900 Sobic007G128100--Sobic003G019900 Sobic008G151600 Sobic008G151600 Sobic007G128100--Sobic008G151600 Sobic003G008800 Sobic003G008800 Sobic007G128100--Sobic003G008800 Sobic004G343200 Sobic004G343200 Sobic003G311500--Sobic004G343200 Sobic003G311500--Sobic007G209600 Sobic008G015200 Sobic008G015200 Sobic003G311500--Sobic008G015200 Sobic007G087800 Sobic007G087800 Sobic003G311500--Sobic007G087800 Sobic003G311500--Sobic007G159200 Sobic002G219900 Sobic002G219900 Sobic003G311500--Sobic002G219900 Sobic006G188800 Sobic006G188800 Sobic003G311500--Sobic006G188800 Sobic003G009200 Sobic003G009200 Sobic003G311500--Sobic003G009200 Sobic002G430900 Sobic002G430900 Sobic003G311500--Sobic002G430900 Sobic007G161600--Sobic008G151600 Sobic007G161600--Sobic005G062600 Sobic007G147200 Sobic007G147200 Sobic007G161600--Sobic007G147200 Sobic001G043500 Sobic001G043500 Sobic007G161600--Sobic001G043500 Sobic007G161600--Sobic003G019900 Sobic010G092400 Sobic010G092400 Sobic007G161600--Sobic010G092400 Sobic006G163300 Sobic006G163300 Sobic007G161600--Sobic006G163300 Sobic007G161600--Sobic003G008800 Sobic003G046400 Sobic003G046400 Sobic007G161600--Sobic003G046400
Octagon: transcription factors


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