Gene annotation
Transcriptome id Sobic.001G300900.2
Synonym EXPB2, Sb01g029273, ATHEXPBETA1.4, ATEXPB2
Functional annotation expansin precursor, putative, expressed
UniProt A0A1Z5S8B7
Pfam PF03330 PF01357
Panther DB PTHR31692 PTHR31692:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65680 : expansin B2
RAP-DB (Rice) LOC_Os10g40720.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a051985 , Zm00025a051983 , Zm00025a051980 , Zm00025a032217 , Zm00025a051976 , Zm00025a051978 , Zm00025a003327 , Zm00025a012128 , Zm00025a003332 , Zm00025a003330 , Zm00025a003331 , Zm00025a000113 , Zm00025a003251
Brachypodium KQK07389 , KQJ97767 , KQJ97766 , KQJ97765 , KQJ97764 , KQJ97762 , KQJ97768
Barley HORVU1Hr1G054240.1 , HORVU1Hr1G054240.2 , HORVU0Hr1G005490.2 , HORVU4Hr1G088080.5 , HORVU5Hr1G019100.10 , HORVU4Hr1G088080.8 , HORVU4Hr1G088080.9 , HORVU4Hr1G088080.2 , HORVU4Hr1G088080.3 , HORVU4Hr1G088080.6 , HORVU4Hr1G088080.7 , HORVU4Hr1G088080.4 , HORVU0Hr1G005490.1 , HORVU5Hr1G019100.8 , HORVU5Hr1G019100.9 , HORVU3Hr1G001920.1 , HORVU3Hr1G001920.3 , HORVU3Hr1G001920.2 , HORVU5Hr1G019100.1 , HORVU5Hr1G019100.3 , HORVU5Hr1G019100.4 , HORVU5Hr1G019100.5 , HORVU5Hr1G019100.6 , HORVU5Hr1G019100.7 , HORVU4Hr1G088140.3 , HORVU4Hr1G088140.2 , HORVU4Hr1G088140.1 , HORVU1Hr1G054250.9 , HORVU1Hr1G054250.8 , HORVU1Hr1G054250.3 , HORVU1Hr1G054250.2 , HORVU1Hr1G054250.1 , HORVU1Hr1G054250.7 , HORVU1Hr1G054250.6 , HORVU0Hr1G016380.2 , HORVU0Hr1G016380.3 , HORVU0Hr1G016380.4 , HORVU4Hr1G088080.10 , HORVU4Hr1G088080.11 , HORVU4Hr1G088080.12 , HORVU4Hr1G088080.13 , HORVU5Hr1G019100.12 , HORVU1Hr1G054250.4 , HORVU5Hr1G019100.11
Wheat TraesCS1D02G215500 , TraesCS1D02G215500 , TraesCS1D02G215100 , TraesCS1B02G226000 , TraesCS3A02G480000 , TraesCS3D02G000500 , TraesCS1D02G215100 , TraesCS4B02G375200 , TraesCS1B02G225700 , TraesCS1B02G225700 , TraesCS1B02G226100 , TraesCS1B02G226100 , TraesCS1B02G226000 , TraesCS1B02G225900 , TraesCS1A02G212300 , TraesCS6A02G032700 , TraesCS1A02G212000 , TraesCS2A02G458900 , TraesCS1D02G215300 , TraesCS1A02G212600 , TraesCS1A02G212400 , TraesCS3D02G000400 , TraesCS1D02G215400 , TraesCS5A02G538000 , TraesCS4D02G361900
Populus -


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cDNA sequences
Sobic.001G300900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G162500 - -
2 Sobic.006G208400 expressed protein K14318: nuclear pore complex protein Nup88
3 Sobic.006G269800 TFIIH basal transcription factor complex p52 subunit, putative, expressed K03144: TFIIH4, GTF2H4, transcription initiation factor TFIIH subunit 4
4 Sobic.003G361400 nsp1-like C-terminal region family protein, expressed K14306: NUP62, nuclear pore complex protein Nup62
5 Sobic.004G119400 ATP-binding domain-containing protein, putative, expressed -
6 Sobic.007G011600 KH domain-containing protein, putative, expressed K13210: far upstream element-binding protein
7 Sobic.008G088842 - -
8 Sobic.003G341700 exo70 exocyst complex subunit domain containing protein, expressed -
9 Sobic.008G017100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
10 Sobic.002G356600 ZCW7, putative, expressed -
11 Sobic.007G159200 PWWP domain containing protein, expressed -
12 Sobic.007G070000 polyprenyl synthetase, putative, expressed K14066: geranyl diphosphate synthase
13 Sobic.004G356200 expressed protein -
14 Sobic.010G262100 expressed protein -
15 Sobic.003G409200 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
16 Sobic.008G080500 expressed protein -
17 Sobic.001G258900 - -
18 Sobic.010G279300 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed -
19 Sobic.002G340200 expressed protein -
20 Sobic.006G274100 ribosome biogenesis regulatory protein, putative, expressed K14852: regulator of ribosome biosynthesis


Gene co-expression network
sample Sobic001G300900 Sobic001G300900 Sobic002G162500 Sobic002G162500 Sobic001G300900--Sobic002G162500 Sobic006G208400 Sobic006G208400 Sobic001G300900--Sobic006G208400 Sobic006G269800 Sobic006G269800 Sobic001G300900--Sobic006G269800 Sobic003G361400 Sobic003G361400 Sobic001G300900--Sobic003G361400 Sobic004G119400 Sobic004G119400 Sobic001G300900--Sobic004G119400 Sobic007G011600 Sobic007G011600 Sobic001G300900--Sobic007G011600 Sobic008G088842 Sobic008G088842 Sobic001G300900--Sobic008G088842 Sobic003G341700 Sobic003G341700 Sobic001G300900--Sobic003G341700 Sobic008G017100 Sobic008G017100 Sobic001G300900--Sobic008G017100 Sobic001G258900 Sobic001G258900 Sobic002G162500--Sobic001G258900 Sobic002G162500--Sobic001G300900 Sobic002G162500--Sobic003G341700 Sobic002G162500--Sobic008G088842 Sobic002G340200 Sobic002G340200 Sobic002G162500--Sobic002G340200 Sobic004G135900 Sobic004G135900 Sobic002G162500--Sobic004G135900 Sobic010G172000 Sobic010G172000 Sobic002G162500--Sobic010G172000 Sobic009G107080 Sobic009G107080 Sobic002G162500--Sobic009G107080 Sobic006G063001 Sobic006G063001 Sobic002G162500--Sobic006G063001 Sobic004G354000 Sobic004G354000 Sobic006G208400--Sobic004G354000 Sobic010G236600 Sobic010G236600 Sobic006G208400--Sobic010G236600 Sobic006G208400--Sobic008G017100 Sobic010G224700 Sobic010G224700 Sobic006G208400--Sobic010G224700 Sobic001G408300 Sobic001G408300 Sobic006G208400--Sobic001G408300 Sobic001G460500 Sobic001G460500 Sobic006G208400--Sobic001G460500 Sobic002G423400 Sobic002G423400 Sobic006G208400--Sobic002G423400 Sobic002G427300 Sobic002G427300 Sobic006G208400--Sobic002G427300 Sobic003G314700 Sobic003G314700 Sobic006G208400--Sobic003G314700 Sobic002G145800 Sobic002G145800 Sobic006G269800--Sobic002G145800 Sobic003G052800 Sobic003G052800 Sobic006G269800--Sobic003G052800 Sobic008G147200 Sobic008G147200 Sobic006G269800--Sobic008G147200 Sobic006G269800--Sobic008G017100 Sobic001G393900 Sobic001G393900 Sobic006G269800--Sobic001G393900 Sobic002G043100 Sobic002G043100 Sobic006G269800--Sobic002G043100 Sobic001G417500 Sobic001G417500 Sobic006G269800--Sobic001G417500 Sobic004G107200 Sobic004G107200 Sobic006G269800--Sobic004G107200 Sobic002G425500 Sobic002G425500 Sobic006G269800--Sobic002G425500 Sobic003G259600 Sobic003G259600 Sobic003G361400--Sobic003G259600 Sobic001G373000 Sobic001G373000 Sobic003G361400--Sobic001G373000 Sobic002G219900 Sobic002G219900 Sobic003G361400--Sobic002G219900 Sobic004G038100 Sobic004G038100 Sobic003G361400--Sobic004G038100 Sobic001G013300 Sobic001G013300 Sobic003G361400--Sobic001G013300 Sobic002G043000 Sobic002G043000 Sobic003G361400--Sobic002G043000 Sobic001G033900 Sobic001G033900 Sobic003G361400--Sobic001G033900 Sobic002G372500 Sobic002G372500 Sobic003G361400--Sobic002G372500 Sobic003G360300 Sobic003G360300 Sobic003G361400--Sobic003G360300 Sobic004G119400--Sobic008G017100 Sobic004G119400--Sobic010G224700 Sobic004G119400--Sobic006G269800 Sobic007G094500 Sobic007G094500 Sobic004G119400--Sobic007G094500 Sobic002G380100 Sobic002G380100 Sobic004G119400--Sobic002G380100 Sobic001G429600 Sobic001G429600 Sobic004G119400--Sobic001G429600 Sobic002G309200 Sobic002G309200 Sobic004G119400--Sobic002G309200 Sobic003G070100 Sobic003G070100 Sobic004G119400--Sobic003G070100 Sobic001G540800 Sobic001G540800 Sobic004G119400--Sobic001G540800 Sobic004G096500 Sobic004G096500 Sobic007G011600--Sobic004G096500 Sobic010G145800 Sobic010G145800 Sobic007G011600--Sobic010G145800 Sobic007G011600--Sobic002G145800 Sobic006G222300 Sobic006G222300 Sobic007G011600--Sobic006G222300 Sobic010G279700 Sobic010G279700 Sobic007G011600--Sobic010G279700 Sobic005G220000 Sobic005G220000 Sobic007G011600--Sobic005G220000 Sobic007G091600 Sobic007G091600 Sobic007G011600--Sobic007G091600 Sobic005G079800 Sobic005G079800 Sobic007G011600--Sobic005G079800 Sobic008G011100 Sobic008G011100 Sobic007G011600--Sobic008G011100 Sobic010G138900 Sobic010G138900 Sobic008G088842--Sobic010G138900 Sobic006G140600 Sobic006G140600 Sobic008G088842--Sobic006G140600 Sobic002G143200 Sobic002G143200 Sobic008G088842--Sobic002G143200 Sobic010G262100 Sobic010G262100 Sobic008G088842--Sobic010G262100 Sobic003G311600 Sobic003G311600 Sobic008G088842--Sobic003G311600 Sobic001G451300 Sobic001G451300 Sobic008G088842--Sobic001G451300 Sobic006G280100 Sobic006G280100 Sobic008G088842--Sobic006G280100 Sobic008G088842--Sobic006G208400 Sobic008G088842--Sobic002G340200 Sobic006G112700 Sobic006G112700 Sobic003G341700--Sobic006G112700 Sobic006G067700 Sobic006G067700 Sobic003G341700--Sobic006G067700 Sobic003G341700--Sobic002G162500 Sobic008G080500 Sobic008G080500 Sobic003G341700--Sobic008G080500 Sobic003G341700--Sobic001G258900 Sobic005G200900 Sobic005G200900 Sobic003G341700--Sobic005G200900 Sobic010G038100 Sobic010G038100 Sobic003G341700--Sobic010G038100 Sobic003G127500 Sobic003G127500 Sobic003G341700--Sobic003G127500 Sobic004G355800 Sobic004G355800 Sobic003G341700--Sobic004G355800 Sobic008G017100--Sobic004G119400 Sobic008G017100--Sobic006G269800 Sobic008G017100--Sobic010G224700 Sobic006G185200 Sobic006G185200 Sobic008G017100--Sobic006G185200 Sobic002G079100 Sobic002G079100 Sobic008G017100--Sobic002G079100 Sobic002G378100 Sobic002G378100 Sobic008G017100--Sobic002G378100 Sobic004G351800 Sobic004G351800 Sobic008G017100--Sobic004G351800 Sobic007G171100 Sobic007G171100 Sobic008G017100--Sobic007G171100 Sobic008G017100--Sobic008G147200
Octagon: transcription factors


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