Gene annotation
Transcriptome id Sobic.002G233800.1
Synonym ATHB-16, HB16, ATHB16, Sb02g027300
Functional annotation homeobox associated leucine zipper, putative, expressed
UniProt C5X323
Pfam PF00046 PF02183
Panther DB PTHR24326 PTHR24326:SF248
NCBI CDD KOG0483; Transcription factor HEX, contains HOX and HALZ domains
KEGG Orthology K09338; homeobox-leucine zipper protein
Gene Ontology GO:0003677; DNA binding GO:0006355regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G40060 : homeobox protein 16
RAP-DB (Rice) LOC_Os09g29460.1 : homeobox associated leucine zipper, putative, expressed
MaizeGDB (Corn) Zm00025a001023 , Zm00025a017816 , Zm00025a004030 , Zm00025a015018 , Zm00025a047342 , Zm00025a048515 , Zm00025a032630 , Zm00025a014128 , Zm00025a021900
Brachypodium KQJ98719 , KQJ90600
Barley HORVU4Hr1G078410.4 , HORVU4Hr1G078410.5 , HORVU4Hr1G078410.2 , HORVU4Hr1G078410.3 , HORVU5Hr1G070260.1 , HORVU5Hr1G070260.2 , HORVU5Hr1G070260.3 , HORVU5Hr1G070260.5
Wheat TraesCS4B02G305300 , TraesCS5A02G249000 , TraesCS5D02G256200 , TraesCS4A02G405800 , TraesCS4D02G303500 , TraesCS5B02G246700
Populus -


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cDNA sequences
Sobic.002G233800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G103800 lecithin cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
2 Sobic.002G082100 serine/threonine-protein kinase, putative, expressed -
3 Sobic.003G177000 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
4 Sobic.007G065300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
5 Sobic.001G146301 - -
6 Sobic.007G128100 expressed protein -
7 Sobic.002G425200 expressed protein -
8 Sobic.006G238400 membrane associated DUF588 domain containing protein, putative, expressed -
9 Sobic.008G038200 TKL_IRAK_CR4L.1 - The CR4L subfamily has homology with Crinkly4, expressed -
10 Sobic.010G014500 aspartic protease, putative, expressed -
11 Sobic.006G188800 H-BTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
12 Sobic.001G448700 "TUD1(Ortholog in rice:Hu et al., 2013)"(PubMedID : 31659845)@U-box domain containing protein, expressed -
13 Sobic.001G300000 - -
14 Sobic.010G032400 mitotic checkpoint protein, putative, expressed K02180: cell cycle arrest protein BUB3
15 Sobic.006G223300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
16 Sobic.003G008800 expressed protein -
17 Sobic.007G159200 PWWP domain containing protein, expressed -
18 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.007G087800 expressed protein K06085: SSX2IP, synovial sarcoma, X breakpoint 2 interacting protein
20 Sobic.002G098500 H-BTB6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -


Gene co-expression network
sample Sobic002G233800 Sobic002G233800 Sobic001G103800 Sobic001G103800 Sobic002G233800--Sobic001G103800 Sobic002G082100 Sobic002G082100 Sobic002G233800--Sobic002G082100 Sobic003G177000 Sobic003G177000 Sobic002G233800--Sobic003G177000 Sobic007G065300 Sobic007G065300 Sobic002G233800--Sobic007G065300 Sobic001G146301 Sobic001G146301 Sobic002G233800--Sobic001G146301 Sobic007G128100 Sobic007G128100 Sobic002G233800--Sobic007G128100 Sobic002G425200 Sobic002G425200 Sobic002G233800--Sobic002G425200 Sobic006G238400 Sobic006G238400 Sobic002G233800--Sobic006G238400 Sobic008G038200 Sobic008G038200 Sobic002G233800--Sobic008G038200 Sobic010G014500 Sobic010G014500 Sobic001G103800--Sobic010G014500 Sobic006G014400 Sobic006G014400 Sobic001G103800--Sobic006G014400 Sobic006G163300 Sobic006G163300 Sobic001G103800--Sobic006G163300 Sobic002G430700 Sobic002G430700 Sobic001G103800--Sobic002G430700 Sobic010G014700 Sobic010G014700 Sobic001G103800--Sobic010G014700 Sobic010G247000 Sobic010G247000 Sobic001G103800--Sobic010G247000 Sobic001G464800 Sobic001G464800 Sobic001G103800--Sobic001G464800 Sobic001G103800--Sobic002G233800 Sobic003G338700 Sobic003G338700 Sobic001G103800--Sobic003G338700 Sobic002G377800 Sobic002G377800 Sobic002G082100--Sobic002G377800 Sobic009G105200 Sobic009G105200 Sobic002G082100--Sobic009G105200 Sobic004G129600 Sobic004G129600 Sobic002G082100--Sobic004G129600 Sobic002G082100--Sobic006G238400 Sobic010G138900 Sobic010G138900 Sobic002G082100--Sobic010G138900 Sobic007G159200 Sobic007G159200 Sobic002G082100--Sobic007G159200 Sobic002G052700 Sobic002G052700 Sobic002G082100--Sobic002G052700 Sobic001G451300 Sobic001G451300 Sobic002G082100--Sobic001G451300 Sobic010G085200 Sobic010G085200 Sobic002G082100--Sobic010G085200 Sobic003G177000--Sobic002G425200 Sobic003G177000--Sobic008G038200 Sobic001G300000 Sobic001G300000 Sobic003G177000--Sobic001G300000 Sobic001G541000 Sobic001G541000 Sobic003G177000--Sobic001G541000 Sobic007G161600 Sobic007G161600 Sobic003G177000--Sobic007G161600 Sobic006G280100 Sobic006G280100 Sobic003G177000--Sobic006G280100 Sobic001G523700 Sobic001G523700 Sobic003G177000--Sobic001G523700 Sobic003G177000--Sobic007G159200 Sobic008G045000 Sobic008G045000 Sobic003G177000--Sobic008G045000 Sobic007G065300--Sobic008G038200 Sobic007G032100 Sobic007G032100 Sobic007G065300--Sobic007G032100 Sobic007G165800 Sobic007G165800 Sobic007G065300--Sobic007G165800 Sobic002G098500 Sobic002G098500 Sobic007G065300--Sobic002G098500 Sobic001G434100 Sobic001G434100 Sobic007G065300--Sobic001G434100 Sobic010G020600 Sobic010G020600 Sobic007G065300--Sobic010G020600 Sobic001G221900 Sobic001G221900 Sobic007G065300--Sobic001G221900 Sobic009G235700 Sobic009G235700 Sobic007G065300--Sobic009G235700 Sobic001G298800 Sobic001G298800 Sobic007G065300--Sobic001G298800 Sobic001G146301--Sobic003G177000 Sobic001G146301--Sobic007G159200 Sobic001G146301--Sobic002G425200 Sobic001G146301--Sobic008G038200 Sobic001G146301--Sobic001G300000 Sobic004G118800 Sobic004G118800 Sobic001G146301--Sobic004G118800 Sobic001G146301--Sobic007G128100 Sobic003G311500 Sobic003G311500 Sobic001G146301--Sobic003G311500 Sobic001G146301--Sobic007G161600 Sobic007G023100 Sobic007G023100 Sobic007G128100--Sobic007G023100 Sobic005G062600 Sobic005G062600 Sobic007G128100--Sobic005G062600 Sobic007G128100--Sobic007G161600 Sobic007G128100--Sobic008G038200 Sobic007G128100--Sobic001G298800 Sobic003G027800 Sobic003G027800 Sobic007G128100--Sobic003G027800 Sobic003G019900 Sobic003G019900 Sobic007G128100--Sobic003G019900 Sobic008G151600 Sobic008G151600 Sobic007G128100--Sobic008G151600 Sobic003G008800 Sobic003G008800 Sobic007G128100--Sobic003G008800 Sobic002G425200--Sobic003G177000 Sobic002G425200--Sobic007G159200 Sobic002G425200--Sobic008G038200 Sobic008G088842 Sobic008G088842 Sobic002G425200--Sobic008G088842 Sobic002G425200--Sobic006G280100 Sobic004G199200 Sobic004G199200 Sobic002G425200--Sobic004G199200 Sobic006G067700 Sobic006G067700 Sobic002G425200--Sobic006G067700 Sobic008G080500 Sobic008G080500 Sobic002G425200--Sobic008G080500 Sobic006G112700 Sobic006G112700 Sobic002G425200--Sobic006G112700 Sobic010G038100 Sobic010G038100 Sobic006G238400--Sobic010G038100 Sobic006G238400--Sobic002G082100 Sobic004G107200 Sobic004G107200 Sobic006G238400--Sobic004G107200 Sobic005G200900 Sobic005G200900 Sobic006G238400--Sobic005G200900 Sobic006G238400--Sobic007G159200 Sobic009G185700 Sobic009G185700 Sobic006G238400--Sobic009G185700 Sobic006G238400--Sobic002G052700 Sobic003G341700 Sobic003G341700 Sobic006G238400--Sobic003G341700 Sobic010G262100 Sobic010G262100 Sobic006G238400--Sobic010G262100 Sobic008G038200--Sobic007G065300 Sobic008G038200--Sobic002G098500 Sobic008G038200--Sobic001G298800 Sobic003G096300 Sobic003G096300 Sobic008G038200--Sobic003G096300 Sobic001G518000 Sobic001G518000 Sobic008G038200--Sobic001G518000 Sobic006G241800 Sobic006G241800 Sobic008G038200--Sobic006G241800 Sobic008G038200--Sobic003G177000 Sobic010G135300 Sobic010G135300 Sobic008G038200--Sobic010G135300 Sobic008G038200--Sobic007G128100
Octagon: transcription factors


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