Gene annotation
Transcriptome id Sobic.010G032400.1
Synonym BUB3.1, Sb10g002920
Functional annotation mitotic checkpoint protein, putative, expressed
UniProt C5Z3U4
Pfam PF00400
Panther DB PTHR10971
NCBI CDD KOG1036; Mitotic spindle checkpoint protein BUB3, WD repeat superfamily
KEGG Orthology K02180; cell cycle arrest protein BUB3
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G19590 : Transducin/WD40 repeat-like superfamily protein
RAP-DB (Rice) LOC_Os03g33580.1 : mitotic checkpoint protein, putative, expressed
MaizeGDB (Corn) Zm00025a001706 , Zm00025a050068
Brachypodium KQK14398 , KQK15460 , PNT74845 , PNT74844 , PNT74847 , PNT74846 , PNT74841 , PNT74840 , PNT74843 , PNT74842
Barley HORVU4Hr1G067810.1
Wheat TraesCS4D02G245500 , TraesCS4D02G245500 , TraesCS4A02G058600 , TraesCS4B02G246100
Populus -


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cDNA sequences
Sobic.010G032400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G121400 surfeit locus protein, putative, expressed -
2 Sobic.004G198900 expressed protein -
3 Sobic.006G221400 expressed protein -
4 Sobic.003G113800 CGMC_GSK.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
K00924: kinase
5 Sobic.001G119900 - K12858: DDX23, ATP-dependent RNA helicase DDX23/PRP28
6 Sobic.004G212700 RNA recognition motif containing protein, putative, expressed K12883: NCBP2, nuclear cap-binding protein subunit 2
7 Sobic.006G233000 protein of unknown function, DUF618 domain containing protein, expressed K15559: regulator of Ty1 transposition protein 103
8 Sobic.001G234200 actin, putative, expressed K16615: actin-related protein 7, plant
9 Sobic.004G079200 heat shock protein DnaJ, putative, expressed K09529: DnaJ homolog subfamily C member 9
10 Sobic.001G239800 3-5 exonuclease family protein, putative, expressed K12591: RRP6, exosome complex exonuclease RRP6
11 Sobic.002G150800 WD domain, G-beta repeat domain containing protein, expressed K16547: protein NEDD1
12 Sobic.003G274400 WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4
13 Sobic.006G188800 H-BTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
14 Sobic.001G459100 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
15 Sobic.003G311500 double-stranded RNA binding motif containing protein, expressed -
16 Sobic.004G287100 tRNA pseudouridine synthase family protein, putative, expressed K06173: truA, tRNA pseudouridine38-40 synthase
17 Sobic.002G083900 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
18 Sobic.007G159200 PWWP domain containing protein, expressed -
19 Sobic.006G242500 CDT1B - Putative DNA replication initiation protein, expressed K10727: chromatin licensing and DNA replication factor 1
20 Sobic.003G293300 nucleoporin, putative, expressed K14304: nuclear pore complex protein Nup85


Gene co-expression network
sample Sobic010G032400 Sobic010G032400 Sobic006G121400 Sobic006G121400 Sobic010G032400--Sobic006G121400 Sobic004G198900 Sobic004G198900 Sobic010G032400--Sobic004G198900 Sobic006G221400 Sobic006G221400 Sobic010G032400--Sobic006G221400 Sobic003G113800 Sobic003G113800 Sobic010G032400--Sobic003G113800 Sobic001G119900 Sobic001G119900 Sobic010G032400--Sobic001G119900 Sobic004G212700 Sobic004G212700 Sobic010G032400--Sobic004G212700 Sobic006G233000 Sobic006G233000 Sobic010G032400--Sobic006G233000 Sobic001G234200 Sobic001G234200 Sobic010G032400--Sobic001G234200 Sobic004G079200 Sobic004G079200 Sobic010G032400--Sobic004G079200 Sobic006G121400--Sobic010G032400 Sobic007G177300 Sobic007G177300 Sobic006G121400--Sobic007G177300 Sobic002G371200 Sobic002G371200 Sobic006G121400--Sobic002G371200 Sobic001G444600 Sobic001G444600 Sobic006G121400--Sobic001G444600 Sobic004G211100 Sobic004G211100 Sobic006G121400--Sobic004G211100 Sobic006G272200 Sobic006G272200 Sobic006G121400--Sobic006G272200 Sobic006G121400--Sobic004G212700 Sobic001G376400 Sobic001G376400 Sobic006G121400--Sobic001G376400 Sobic003G275600 Sobic003G275600 Sobic006G121400--Sobic003G275600 Sobic002G017900 Sobic002G017900 Sobic004G198900--Sobic002G017900 Sobic006G242500 Sobic006G242500 Sobic004G198900--Sobic006G242500 Sobic004G198900--Sobic004G212700 Sobic005G120700 Sobic005G120700 Sobic004G198900--Sobic005G120700 Sobic004G198900--Sobic006G233000 Sobic004G198900--Sobic010G032400 Sobic003G274400 Sobic003G274400 Sobic004G198900--Sobic003G274400 Sobic001G536000 Sobic001G536000 Sobic004G198900--Sobic001G536000 Sobic004G155600 Sobic004G155600 Sobic004G198900--Sobic004G155600 Sobic006G221400--Sobic010G032400 Sobic008G125000 Sobic008G125000 Sobic006G221400--Sobic008G125000 Sobic006G221400--Sobic001G444600 Sobic008G017200 Sobic008G017200 Sobic006G221400--Sobic008G017200 Sobic003G158700 Sobic003G158700 Sobic006G221400--Sobic003G158700 Sobic007G180000 Sobic007G180000 Sobic006G221400--Sobic007G180000 Sobic001G132900 Sobic001G132900 Sobic006G221400--Sobic001G132900 Sobic004G047200 Sobic004G047200 Sobic006G221400--Sobic004G047200 Sobic010G269100 Sobic010G269100 Sobic006G221400--Sobic010G269100 Sobic006G280500 Sobic006G280500 Sobic003G113800--Sobic006G280500 Sobic003G293300 Sobic003G293300 Sobic003G113800--Sobic003G293300 Sobic004G279100 Sobic004G279100 Sobic003G113800--Sobic004G279100 Sobic003G113800--Sobic001G234200 Sobic002G071000 Sobic002G071000 Sobic003G113800--Sobic002G071000 Sobic006G049700 Sobic006G049700 Sobic003G113800--Sobic006G049700 Sobic002G235300 Sobic002G235300 Sobic003G113800--Sobic002G235300 Sobic001G459100 Sobic001G459100 Sobic003G113800--Sobic001G459100 Sobic002G083900 Sobic002G083900 Sobic003G113800--Sobic002G083900 Sobic003G122500 Sobic003G122500 Sobic001G119900--Sobic003G122500 Sobic010G228700 Sobic010G228700 Sobic001G119900--Sobic010G228700 Sobic004G235300 Sobic004G235300 Sobic001G119900--Sobic004G235300 Sobic008G051200 Sobic008G051200 Sobic001G119900--Sobic008G051200 Sobic001G119900--Sobic002G083900 Sobic009G155250 Sobic009G155250 Sobic001G119900--Sobic009G155250 Sobic010G085200 Sobic010G085200 Sobic001G119900--Sobic010G085200 Sobic001G251100 Sobic001G251100 Sobic001G119900--Sobic001G251100 Sobic002G052700 Sobic002G052700 Sobic001G119900--Sobic002G052700 Sobic004G129600 Sobic004G129600 Sobic004G212700--Sobic004G129600 Sobic004G206300 Sobic004G206300 Sobic004G212700--Sobic004G206300 Sobic004G019600 Sobic004G019600 Sobic004G212700--Sobic004G019600 Sobic006G245700 Sobic006G245700 Sobic004G212700--Sobic006G245700 Sobic001G346300 Sobic001G346300 Sobic004G212700--Sobic001G346300 Sobic004G212700--Sobic003G274400 Sobic010G154000 Sobic010G154000 Sobic004G212700--Sobic010G154000 Sobic002G394800 Sobic002G394800 Sobic004G212700--Sobic002G394800 Sobic004G212700--Sobic004G198900 Sobic006G010000 Sobic006G010000 Sobic006G233000--Sobic006G010000 Sobic006G233000--Sobic010G085200 Sobic006G233300 Sobic006G233300 Sobic006G233000--Sobic006G233300 Sobic006G233000--Sobic004G155600 Sobic001G259000 Sobic001G259000 Sobic006G233000--Sobic001G259000 Sobic006G233000--Sobic002G394800 Sobic003G439800 Sobic003G439800 Sobic006G233000--Sobic003G439800 Sobic006G270600 Sobic006G270600 Sobic006G233000--Sobic006G270600 Sobic007G134100 Sobic007G134100 Sobic006G233000--Sobic007G134100 Sobic001G234200--Sobic002G071000 Sobic001G234200--Sobic006G049700 Sobic001G234200--Sobic006G010000 Sobic001G234200--Sobic003G293300 Sobic007G079300 Sobic007G079300 Sobic001G234200--Sobic007G079300 Sobic001G114500 Sobic001G114500 Sobic001G234200--Sobic001G114500 Sobic001G234200--Sobic001G459100 Sobic001G234200--Sobic002G083900 Sobic003G264200 Sobic003G264200 Sobic001G234200--Sobic003G264200 Sobic009G231700 Sobic009G231700 Sobic004G079200--Sobic009G231700 Sobic002G014400 Sobic002G014400 Sobic004G079200--Sobic002G014400 Sobic004G079200--Sobic004G198900 Sobic002G319200 Sobic002G319200 Sobic004G079200--Sobic002G319200 Sobic004G079200--Sobic004G047200 Sobic004G079200--Sobic007G177300 Sobic004G079200--Sobic006G233000 Sobic004G336600 Sobic004G336600 Sobic004G079200--Sobic004G336600 Sobic004G079200--Sobic010G032400
Octagon: transcription factors


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