Gene annotation
Transcriptome id Sobic.001G103800.2
Synonym Sb01g009270
Functional annotation lecithin cholesterol acyltransferase, putative, expressed
UniProt A0A1Z5S555
Pfam PF02450
Panther DB PTHR11440 PTHR11440:SF35
NCBI CDD KOG2369; Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase
KEGG Orthology K06129; lysophospholipase III
Gene Ontology GO:0008374; O-acyltransferase activity GO:0006629lipid metabolic process


Orthologs (automatic annotation)
TAIR AT1G27480 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os03g52010.1 : lecithin cholesterol acyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a008008
Brachypodium KQK13391
Barley HORVU4Hr1G010180.2 , HORVU4Hr1G010180.3 , HORVU4Hr1G010180.1 , HORVU4Hr1G010180.5 , HORVU4Hr1G010180.8
Wheat TraesCS4D02G060200 , TraesCS4A02G253900 , TraesCS4A02G254000 , TraesCS4B02G060500
Populus -


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cDNA sequences
Sobic.001G103800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G014500 aspartic protease, putative, expressed -
2 Sobic.006G014400 pectate lyase precursor, putative, expressed K01728: pectate lyase
3 Sobic.006G163300 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
4 Sobic.002G430700 glycosyltransferase family 43 protein, putative, expressed -
5 Sobic.010G014700 expressed protein -
6 Sobic.010G247000 expressed protein -
7 Sobic.001G464800 cyclin, putative, expressed K18811: cyclin D5, plant
8 Sobic.002G233800 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
9 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.002G360600 expressed protein -
11 Sobic.006G107500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.001G522300 leucine-rich repeat transmembrane protein kinase, putative, expressed -
13 Sobic.009G099150 - -
14 Sobic.007G165800 SLG(Ortholog in rice:Feng et al. (2016))(PubMedID : 31659908)@transferase family protein, putative, expressed -
15 Sobic.003G010700 plant-specific domain TIGR01568 family protein, expressed -
16 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -
17 Sobic.001G455900 "qGL3-2/qLGY3(Ortholog in rice:Yu et al., 2018/Liu et al., 2018)"(PubMedID : 31659846)@determinacy of the spikelet meristem and determining the identity of lemmas and paleas(PubMedID : 15208396)@OsMADS1 - MADS-box family gene with MIKCc type-box, expressed -
18 Sobic.010G077000 "Upregulated in leave and stem in response to drouht stress, not expredded in roots"(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
19 Sobic.007G065300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
20 Sobic.007G128100 expressed protein -


Gene co-expression network
sample Sobic001G103800 Sobic001G103800 Sobic010G014500 Sobic010G014500 Sobic001G103800--Sobic010G014500 Sobic006G014400 Sobic006G014400 Sobic001G103800--Sobic006G014400 Sobic006G163300 Sobic006G163300 Sobic001G103800--Sobic006G163300 Sobic002G430700 Sobic002G430700 Sobic001G103800--Sobic002G430700 Sobic010G014700 Sobic010G014700 Sobic001G103800--Sobic010G014700 Sobic010G247000 Sobic010G247000 Sobic001G103800--Sobic010G247000 Sobic001G464800 Sobic001G464800 Sobic001G103800--Sobic001G464800 Sobic002G233800 Sobic002G233800 Sobic001G103800--Sobic002G233800 Sobic003G338700 Sobic003G338700 Sobic001G103800--Sobic003G338700 Sobic010G014500--Sobic003G338700 Sobic010G077000 Sobic010G077000 Sobic010G014500--Sobic010G077000 Sobic005G199700 Sobic005G199700 Sobic010G014500--Sobic005G199700 Sobic003G019900 Sobic003G019900 Sobic010G014500--Sobic003G019900 Sobic010G014500--Sobic010G014700 Sobic009G146700 Sobic009G146700 Sobic010G014500--Sobic009G146700 Sobic001G299600 Sobic001G299600 Sobic010G014500--Sobic001G299600 Sobic007G165800 Sobic007G165800 Sobic010G014500--Sobic007G165800 Sobic007G180200 Sobic007G180200 Sobic010G014500--Sobic007G180200 Sobic006G014400--Sobic010G247000 Sobic007G087800 Sobic007G087800 Sobic006G014400--Sobic007G087800 Sobic006G014400--Sobic002G430700 Sobic010G231600 Sobic010G231600 Sobic006G014400--Sobic010G231600 Sobic007G116800 Sobic007G116800 Sobic006G014400--Sobic007G116800 Sobic006G014400--Sobic006G163300 Sobic006G014400--Sobic010G077000 Sobic010G092400 Sobic010G092400 Sobic006G014400--Sobic010G092400 Sobic006G270500 Sobic006G270500 Sobic006G014400--Sobic006G270500 Sobic002G360600 Sobic002G360600 Sobic006G163300--Sobic002G360600 Sobic001G455900 Sobic001G455900 Sobic006G163300--Sobic001G455900 Sobic003G046400 Sobic003G046400 Sobic006G163300--Sobic003G046400 Sobic003G010700 Sobic003G010700 Sobic006G163300--Sobic003G010700 Sobic010G070900 Sobic010G070900 Sobic006G163300--Sobic010G070900 Sobic007G147200 Sobic007G147200 Sobic006G163300--Sobic007G147200 Sobic007G033700 Sobic007G033700 Sobic006G163300--Sobic007G033700 Sobic006G107500 Sobic006G107500 Sobic006G163300--Sobic006G107500 Sobic001G101900 Sobic001G101900 Sobic006G163300--Sobic001G101900 Sobic002G430700--Sobic006G107500 Sobic003G085900 Sobic003G085900 Sobic002G430700--Sobic003G085900 Sobic002G430700--Sobic006G163300 Sobic002G430700--Sobic002G360600 Sobic002G430700--Sobic010G070900 Sobic003G090600 Sobic003G090600 Sobic002G430700--Sobic003G090600 Sobic002G430700--Sobic003G046400 Sobic002G430700--Sobic007G147200 Sobic002G430700--Sobic010G014500 Sobic010G014700--Sobic003G338700 Sobic010G014700--Sobic009G146700 Sobic001G199400 Sobic001G199400 Sobic010G014700--Sobic001G199400 Sobic010G014700--Sobic005G199700 Sobic002G363300 Sobic002G363300 Sobic010G014700--Sobic002G363300 Sobic010G014700--Sobic010G014500 Sobic010G014700--Sobic007G180200 Sobic003G027100 Sobic003G027100 Sobic010G014700--Sobic003G027100 Sobic004G215400 Sobic004G215400 Sobic010G014700--Sobic004G215400 Sobic010G247000--Sobic001G455900 Sobic010G247000--Sobic006G163300 Sobic010G247000--Sobic003G010700 Sobic010G247000--Sobic007G033700 Sobic001G143400 Sobic001G143400 Sobic010G247000--Sobic001G143400 Sobic010G247000--Sobic003G046400 Sobic010G276600 Sobic010G276600 Sobic010G247000--Sobic010G276600 Sobic009G171800 Sobic009G171800 Sobic010G247000--Sobic009G171800 Sobic010G247000--Sobic006G014400 Sobic001G464800--Sobic006G163300 Sobic001G464800--Sobic010G092400 Sobic001G464800--Sobic007G147200 Sobic001G464800--Sobic010G070900 Sobic001G464800--Sobic006G107500 Sobic001G464800--Sobic001G101900 Sobic001G464800--Sobic002G360600 Sobic001G464800--Sobic002G430700 Sobic001G464800--Sobic010G014500 Sobic002G233800--Sobic001G103800 Sobic002G082100 Sobic002G082100 Sobic002G233800--Sobic002G082100 Sobic003G177000 Sobic003G177000 Sobic002G233800--Sobic003G177000 Sobic007G065300 Sobic007G065300 Sobic002G233800--Sobic007G065300 Sobic001G146301 Sobic001G146301 Sobic002G233800--Sobic001G146301 Sobic007G128100 Sobic007G128100 Sobic002G233800--Sobic007G128100 Sobic002G425200 Sobic002G425200 Sobic002G233800--Sobic002G425200 Sobic006G238400 Sobic006G238400 Sobic002G233800--Sobic006G238400 Sobic008G038200 Sobic008G038200 Sobic002G233800--Sobic008G038200 Sobic003G338700--Sobic009G146700 Sobic003G338700--Sobic005G199700 Sobic003G338700--Sobic010G014500 Sobic003G338700--Sobic010G014700 Sobic003G338700--Sobic002G363300 Sobic001G286700 Sobic001G286700 Sobic003G338700--Sobic001G286700 Sobic003G338700--Sobic007G180200 Sobic003G338700--Sobic001G199400 Sobic003G338700--Sobic003G019900
Octagon: transcription factors


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