Gene annotation
Transcriptome id Sobic.002G082100.1
Synonym Sb02g006870
Functional annotation serine/threonine-protein kinase, putative, expressed
UniProt C5XDH3
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF119
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G59110 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os10g35450.1 : serine/threonine-protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a044772 , Zm00025a013379
Brachypodium KQK04596
Barley HORVU1Hr1G094050.1 , HORVU1Hr1G094050.4 , HORVU1Hr1G094050.3 , HORVU1Hr1G094050.2 , HORVU1Hr1G094050.5
Wheat TraesCS1B02G469400 , TraesCS1B02G468800 , TraesCS1B02G468800 , TraesCS1B02G468800 , TraesCS1D02G443100 , TraesCS1A02G433500
Populus -


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cDNA sequences
Sobic.002G082100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G377800 heat shock protein DnaJ, putative, expressed -
2 Sobic.009G105200 PPR repeat containing protein, expressed -
3 Sobic.004G129600 expressed protein -
4 Sobic.006G238400 membrane associated DUF588 domain containing protein, putative, expressed -
5 Sobic.010G138900 cytidine and deoxycytidylate deaminase zinc-binding region family protein, expressed K11991: tRNA(adenine34) deaminase
6 Sobic.007G159200 PWWP domain containing protein, expressed -
7 Sobic.002G052700 cyclophilin, putative, expressed K09566: peptidyl-prolyl isomerase G (cyclophilin G)
8 Sobic.001G451300 NUP155, putative, expressed K14312: NUP155, NUP170, nuclear pore complex protein Nup155
9 Sobic.010G085200 mediator of RNA polymerase II transcription subunit 6, putative, expressed K15128: mediator of RNA polymerase II transcription subunit 6
10 Sobic.003G209400 expressed protein -
11 Sobic.004G351800 PPR repeat containing protein, expressed -
12 Sobic.003G188300 expressed protein -
13 Sobic.001G261900 caffeine-induced death protein 1, putative, expressed -
14 Sobic.002G052400 PPR repeat containing protein, expressed -
15 Sobic.010G038100 OsFBDUF30 - F-box and DUF domain containing protein, expressed -
16 Sobic.005G220000 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
17 Sobic.010G171100 RNA recognition motif containing protein, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
18 Sobic.009G007700 expressed protein -
19 Sobic.008G088842 - -
20 Sobic.010G262100 expressed protein -


Gene co-expression network
sample Sobic002G082100 Sobic002G082100 Sobic002G377800 Sobic002G377800 Sobic002G082100--Sobic002G377800 Sobic009G105200 Sobic009G105200 Sobic002G082100--Sobic009G105200 Sobic004G129600 Sobic004G129600 Sobic002G082100--Sobic004G129600 Sobic006G238400 Sobic006G238400 Sobic002G082100--Sobic006G238400 Sobic010G138900 Sobic010G138900 Sobic002G082100--Sobic010G138900 Sobic007G159200 Sobic007G159200 Sobic002G082100--Sobic007G159200 Sobic002G052700 Sobic002G052700 Sobic002G082100--Sobic002G052700 Sobic001G451300 Sobic001G451300 Sobic002G082100--Sobic001G451300 Sobic010G085200 Sobic010G085200 Sobic002G082100--Sobic010G085200 Sobic007G145100 Sobic007G145100 Sobic002G377800--Sobic007G145100 Sobic002G377800--Sobic002G082100 Sobic002G052400 Sobic002G052400 Sobic002G377800--Sobic002G052400 Sobic002G377800--Sobic009G105200 Sobic008G022701 Sobic008G022701 Sobic002G377800--Sobic008G022701 Sobic002G377800--Sobic010G138900 Sobic002G184400 Sobic002G184400 Sobic002G377800--Sobic002G184400 Sobic001G544500 Sobic001G544500 Sobic002G377800--Sobic001G544500 Sobic003G209400 Sobic003G209400 Sobic002G377800--Sobic003G209400 Sobic010G228700 Sobic010G228700 Sobic009G105200--Sobic010G228700 Sobic009G105200--Sobic001G544500 Sobic007G000300 Sobic007G000300 Sobic009G105200--Sobic007G000300 Sobic009G005400 Sobic009G005400 Sobic009G105200--Sobic009G005400 Sobic006G275000 Sobic006G275000 Sobic009G105200--Sobic006G275000 Sobic009G105200--Sobic002G052400 Sobic007G225000 Sobic007G225000 Sobic009G105200--Sobic007G225000 Sobic010G100800 Sobic010G100800 Sobic009G105200--Sobic010G100800 Sobic001G261900 Sobic001G261900 Sobic009G105200--Sobic001G261900 Sobic004G212700 Sobic004G212700 Sobic004G129600--Sobic004G212700 Sobic004G206300 Sobic004G206300 Sobic004G129600--Sobic004G206300 Sobic003G274400 Sobic003G274400 Sobic004G129600--Sobic003G274400 Sobic009G031500 Sobic009G031500 Sobic004G129600--Sobic009G031500 Sobic001G335500 Sobic001G335500 Sobic004G129600--Sobic001G335500 Sobic007G125700 Sobic007G125700 Sobic004G129600--Sobic007G125700 Sobic007G153700 Sobic007G153700 Sobic004G129600--Sobic007G153700 Sobic004G043750 Sobic004G043750 Sobic004G129600--Sobic004G043750 Sobic002G017900 Sobic002G017900 Sobic004G129600--Sobic002G017900 Sobic010G038100 Sobic010G038100 Sobic006G238400--Sobic010G038100 Sobic006G238400--Sobic002G082100 Sobic004G107200 Sobic004G107200 Sobic006G238400--Sobic004G107200 Sobic005G200900 Sobic005G200900 Sobic006G238400--Sobic005G200900 Sobic006G238400--Sobic007G159200 Sobic009G185700 Sobic009G185700 Sobic006G238400--Sobic009G185700 Sobic006G238400--Sobic002G052700 Sobic003G341700 Sobic003G341700 Sobic006G238400--Sobic003G341700 Sobic010G262100 Sobic010G262100 Sobic006G238400--Sobic010G262100 Sobic008G088842 Sobic008G088842 Sobic010G138900--Sobic008G088842 Sobic010G138900--Sobic010G262100 Sobic010G138900--Sobic001G451300 Sobic009G142000 Sobic009G142000 Sobic010G138900--Sobic009G142000 Sobic001G453000 Sobic001G453000 Sobic010G138900--Sobic001G453000 Sobic003G435500 Sobic003G435500 Sobic010G138900--Sobic003G435500 Sobic003G250900 Sobic003G250900 Sobic010G138900--Sobic003G250900 Sobic004G034700 Sobic004G034700 Sobic010G138900--Sobic004G034700 Sobic002G043100 Sobic002G043100 Sobic010G138900--Sobic002G043100 Sobic008G080500 Sobic008G080500 Sobic007G159200--Sobic008G080500 Sobic001G248100 Sobic001G248100 Sobic007G159200--Sobic001G248100 Sobic006G280100 Sobic006G280100 Sobic007G159200--Sobic006G280100 Sobic010G051400 Sobic010G051400 Sobic007G159200--Sobic010G051400 Sobic004G355800 Sobic004G355800 Sobic007G159200--Sobic004G355800 Sobic002G425200 Sobic002G425200 Sobic007G159200--Sobic002G425200 Sobic007G159200--Sobic010G262100 Sobic001G300000 Sobic001G300000 Sobic007G159200--Sobic001G300000 Sobic009G007700 Sobic009G007700 Sobic007G159200--Sobic009G007700 Sobic001G251100 Sobic001G251100 Sobic002G052700--Sobic001G251100 Sobic004G357400 Sobic004G357400 Sobic002G052700--Sobic004G357400 Sobic003G042400 Sobic003G042400 Sobic002G052700--Sobic003G042400 Sobic004G321700 Sobic004G321700 Sobic002G052700--Sobic004G321700 Sobic001G393900 Sobic001G393900 Sobic002G052700--Sobic001G393900 Sobic001G003500 Sobic001G003500 Sobic002G052700--Sobic001G003500 Sobic001G052400 Sobic001G052400 Sobic002G052700--Sobic001G052400 Sobic003G379200 Sobic003G379200 Sobic002G052700--Sobic003G379200 Sobic008G147200 Sobic008G147200 Sobic002G052700--Sobic008G147200 Sobic001G451300--Sobic010G262100 Sobic001G451300--Sobic004G034700 Sobic001G451300--Sobic010G138900 Sobic001G451300--Sobic002G043100 Sobic003G309050 Sobic003G309050 Sobic001G451300--Sobic003G309050 Sobic010G174700 Sobic010G174700 Sobic001G451300--Sobic010G174700 Sobic002G371600 Sobic002G371600 Sobic001G451300--Sobic002G371600 Sobic001G451300--Sobic009G142000 Sobic002G399800 Sobic002G399800 Sobic001G451300--Sobic002G399800 Sobic005G220000 Sobic005G220000 Sobic010G085200--Sobic005G220000 Sobic002G412700 Sobic002G412700 Sobic010G085200--Sobic002G412700 Sobic006G233000 Sobic006G233000 Sobic010G085200--Sobic006G233000 Sobic010G085200--Sobic009G007700 Sobic010G279700 Sobic010G279700 Sobic010G085200--Sobic010G279700 Sobic010G239800 Sobic010G239800 Sobic010G085200--Sobic010G239800 Sobic007G011600 Sobic007G011600 Sobic010G085200--Sobic007G011600 Sobic003G314700 Sobic003G314700 Sobic010G085200--Sobic003G314700 Sobic010G085200--Sobic003G209400
Octagon: transcription factors


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