Gene annotation
Transcriptome id Sobic.004G172500.1
Synonym Sb04g022330
Functional annotation expressed protein
UniProt C5XUV9
Pfam -
Panther DB PTHR36056
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g34500.1 : expressed protein
MaizeGDB (Corn) Zm00025a031580 , Zm00025a020610
Brachypodium PNT68805 , KQJ99822 , KQJ99821
Barley HORVU0Hr1G038650.4 , HORVU0Hr1G038650.5 , HORVU0Hr1G038650.6 , HORVU0Hr1G038650.2 , HORVU0Hr1G038650.3
Wheat TraesCS6A02G190200 , TraesCS6A02G190200 , TraesCS6A02G190200 , TraesCS2A02G303300 , TraesCS2A02G303300 , TraesCS2D02G301900 , TraesCS2D02G301900 , TraesCS2D02G301900 , TraesCS6B02G222600 , TraesCS6B02G222600 , TraesCS6B02G222600 , TraesCS2B02G319800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G244900 auxin efflux carrier, putative, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
2 Sobic.002G076500 protein Kinase-associated protein phosphatase, putative, expressed K01090: protein phosphatase
3 Sobic.005G150600 expressed protein -
4 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -
5 Sobic.001G030000 FG-GAP repeat-containing protein, putative, expressed -
6 Sobic.001G237600 transcription factor Dp, putative, expressed K04683: transcription factor Dp-1
7 Sobic.009G228000 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
8 Sobic.004G213800 expressed protein -
9 Sobic.003G272700 transmembrane protein 16K, putative, expressed -
10 Sobic.003G043000 expressed protein -
11 Sobic.009G107300 3\'-5\' exonuclease, putative, expressed -
12 Sobic.001G250700 expressed protein -
13 Sobic.003G113300 expressed protein -
14 Sobic.002G374300 FAR1 family protein, expressed K17604: zinc finger SWIM domain-containing protein 3
15 Sobic.002G386600 heat shock protein DnaJ, putative, expressed -
16 Sobic.007G153500 metal cation transporter, putative, expressed K14713: SLC39A7, KE4, solute carrier family 39 (zinc transporter), member 7
17 Sobic.003G241700 SET domain containing protein, expressed -
18 Sobic.004G320700 CCR4-NOT transcription factor, putative, expressed K12605: CNOT2, CCR4-NOT transcription complex subunit 2
19 Sobic.007G000300 expressed protein -
20 Sobic.003G397900 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDasubunit precursor, putative, expressed K12667: SWP1, oligosaccharyltransferase complex subunit delta (ribophorin II)


Gene co-expression network
sample Sobic004G172500 Sobic004G172500 Sobic010G244900 Sobic010G244900 Sobic004G172500--Sobic010G244900 Sobic002G076500 Sobic002G076500 Sobic004G172500--Sobic002G076500 Sobic005G150600 Sobic005G150600 Sobic004G172500--Sobic005G150600 Sobic003G363700 Sobic003G363700 Sobic004G172500--Sobic003G363700 Sobic001G030000 Sobic001G030000 Sobic004G172500--Sobic001G030000 Sobic001G237600 Sobic001G237600 Sobic004G172500--Sobic001G237600 Sobic009G228000 Sobic009G228000 Sobic004G172500--Sobic009G228000 Sobic004G213800 Sobic004G213800 Sobic004G172500--Sobic004G213800 Sobic003G272700 Sobic003G272700 Sobic004G172500--Sobic003G272700 Sobic010G244900--Sobic004G172500 Sobic002G292900 Sobic002G292900 Sobic010G244900--Sobic002G292900 Sobic010G244900--Sobic004G213800 Sobic010G244900--Sobic001G237600 Sobic004G320700 Sobic004G320700 Sobic010G244900--Sobic004G320700 Sobic006G039400 Sobic006G039400 Sobic010G244900--Sobic006G039400 Sobic003G043000 Sobic003G043000 Sobic010G244900--Sobic003G043000 Sobic003G241700 Sobic003G241700 Sobic010G244900--Sobic003G241700 Sobic010G244900--Sobic005G150600 Sobic007G153500 Sobic007G153500 Sobic002G076500--Sobic007G153500 Sobic008G116700 Sobic008G116700 Sobic002G076500--Sobic008G116700 Sobic003G432800 Sobic003G432800 Sobic002G076500--Sobic003G432800 Sobic002G322400 Sobic002G322400 Sobic002G076500--Sobic002G322400 Sobic006G210700 Sobic006G210700 Sobic002G076500--Sobic006G210700 Sobic008G019532 Sobic008G019532 Sobic002G076500--Sobic008G019532 Sobic005G087300 Sobic005G087300 Sobic002G076500--Sobic005G087300 Sobic002G076500--Sobic004G172500 Sobic001G051400 Sobic001G051400 Sobic002G076500--Sobic001G051400 Sobic005G150600--Sobic004G172500 Sobic005G150600--Sobic010G244900 Sobic005G150600--Sobic002G076500 Sobic006G141600 Sobic006G141600 Sobic005G150600--Sobic006G141600 Sobic005G150600--Sobic007G153500 Sobic005G150600--Sobic002G292900 Sobic005G150600--Sobic004G213800 Sobic004G030400 Sobic004G030400 Sobic005G150600--Sobic004G030400 Sobic009G112300 Sobic009G112300 Sobic005G150600--Sobic009G112300 Sobic003G379200 Sobic003G379200 Sobic003G363700--Sobic003G379200 Sobic003G363700--Sobic001G237600 Sobic004G265500 Sobic004G265500 Sobic003G363700--Sobic004G265500 Sobic002G371700 Sobic002G371700 Sobic003G363700--Sobic002G371700 Sobic003G363700--Sobic009G228000 Sobic002G374300 Sobic002G374300 Sobic003G363700--Sobic002G374300 Sobic003G363700--Sobic003G043000 Sobic010G000800 Sobic010G000800 Sobic003G363700--Sobic010G000800 Sobic003G182300 Sobic003G182300 Sobic003G363700--Sobic003G182300 Sobic001G308400 Sobic001G308400 Sobic001G030000--Sobic001G308400 Sobic004G141800 Sobic004G141800 Sobic001G030000--Sobic004G141800 Sobic010G169900 Sobic010G169900 Sobic001G030000--Sobic010G169900 Sobic001G030000--Sobic003G043000 Sobic001G030000--Sobic004G265500 Sobic002G227500 Sobic002G227500 Sobic001G030000--Sobic002G227500 Sobic005G110499 Sobic005G110499 Sobic001G030000--Sobic005G110499 Sobic003G405500 Sobic003G405500 Sobic001G030000--Sobic003G405500 Sobic003G163200 Sobic003G163200 Sobic001G030000--Sobic003G163200 Sobic001G237600--Sobic003G363700 Sobic001G237600--Sobic004G320700 Sobic002G079000 Sobic002G079000 Sobic001G237600--Sobic002G079000 Sobic007G087000 Sobic007G087000 Sobic001G237600--Sobic007G087000 Sobic001G237600--Sobic006G039400 Sobic003G202600 Sobic003G202600 Sobic001G237600--Sobic003G202600 Sobic001G237600--Sobic010G244900 Sobic001G095000 Sobic001G095000 Sobic001G237600--Sobic001G095000 Sobic001G237600--Sobic002G292900 Sobic009G107300 Sobic009G107300 Sobic009G228000--Sobic009G107300 Sobic009G228000--Sobic003G043000 Sobic004G240400 Sobic004G240400 Sobic009G228000--Sobic004G240400 Sobic009G228000--Sobic003G241700 Sobic009G228000--Sobic003G363700 Sobic002G063900 Sobic002G063900 Sobic009G228000--Sobic002G063900 Sobic003G297500 Sobic003G297500 Sobic009G228000--Sobic003G297500 Sobic004G209700 Sobic004G209700 Sobic009G228000--Sobic004G209700 Sobic006G234700 Sobic006G234700 Sobic009G228000--Sobic006G234700 Sobic004G213800--Sobic003G241700 Sobic001G151100 Sobic001G151100 Sobic004G213800--Sobic001G151100 Sobic004G213800--Sobic010G244900 Sobic004G213800--Sobic009G228000 Sobic003G296900 Sobic003G296900 Sobic004G213800--Sobic003G296900 Sobic004G213800--Sobic003G043000 Sobic005G167700 Sobic005G167700 Sobic004G213800--Sobic005G167700 Sobic001G275300 Sobic001G275300 Sobic004G213800--Sobic001G275300 Sobic007G000300 Sobic007G000300 Sobic004G213800--Sobic007G000300 Sobic003G272700--Sobic009G228000 Sobic003G272700--Sobic009G107300 Sobic003G150100 Sobic003G150100 Sobic003G272700--Sobic003G150100 Sobic006G056700 Sobic006G056700 Sobic003G272700--Sobic006G056700 Sobic003G272700--Sobic004G172500 Sobic003G272700--Sobic003G297500 Sobic003G272700--Sobic003G363700 Sobic006G267600 Sobic006G267600 Sobic003G272700--Sobic006G267600 Sobic003G272700--Sobic004G320700
Octagon: transcription factors


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