Gene annotation
Transcriptome id Sobic.001G237600.1
Synonym DPB, Sb01g021000, ATDPB
Functional annotation transcription factor Dp, putative, expressed
UniProt C5X0H5
Pfam PF02319 PF08781
Panther DB PTHR12548 PTHR12548:SF15
NCBI CDD -
KEGG Orthology K04683; transcription factor Dp-1
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005667transcription regulator complex GO:0003700DNA-binding transcription factor activity GO:0007049cell cycle


Orthologs (automatic annotation)
TAIR AT5G03415 : Transcription factor DP
RAP-DB (Rice) LOC_Os03g05760.1 : transcription factor Dp, putative, expressed
MaizeGDB (Corn) Zm00025a017732
Brachypodium KQJ96870 , KQJ96871 , KQJ96872 , KQJ96873 , PNT67451
Barley -
Wheat TraesCS4B02G268800 , TraesCS1B02G156900 , TraesCS1A02G139700 , TraesCS1D02G139300 , TraesCS4D02G268100 , TraesCS4D02G268100 , TraesCS4A02G036000
Populus PNS98738 , PNS98739 , PNT31250


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cDNA sequences
Sobic.001G237600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G363700 OsFBL5 - F-box domain and LRR containing protein, expressed -
2 Sobic.004G320700 CCR4-NOT transcription factor, putative, expressed K12605: CNOT2, CCR4-NOT transcription complex subunit 2
3 Sobic.002G079000 expressed protein -
4 Sobic.007G087000 aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
5 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
6 Sobic.003G202600 single myb histone, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.010G244900 auxin efflux carrier, putative, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
8 Sobic.001G095000 CorA-like magnesium transporter protein, putative, expressed K16075: MRS2, magnesium transporter
9 Sobic.002G292900 protein binding protein, putative, expressed -
10 Sobic.005G144201 - -
11 Sobic.004G252900 transcription factor IIA large subunit, putative, expressed K03122: TFIIA1, GTF2A1, transcription initiation factor TFIIA large subunit
12 Sobic.004G172500 expressed protein -
13 Sobic.001G358500 GA20734-PA, putative, expressed -
14 Sobic.003G302200 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
15 Sobic.003G193500 CK1_CaseinKinase_1.2 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
16 Sobic.010G169900 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
17 Sobic.006G093300 expressed protein K02519: infB, translation initiation factor IF-2
18 Sobic.002G076500 protein Kinase-associated protein phosphatase, putative, expressed K01090: protein phosphatase
19 Sobic.003G132000 proteasome subunit, putative, expressed K12176: COPS2, CSN2, COP9 signalosome complex subunit 2
20 Sobic.003G182300 zinc finger family protein, putative, expressed K16284: E3 ubiquitin-protein ligase SIS3


Gene co-expression network
sample Sobic001G237600 Sobic001G237600 Sobic003G363700 Sobic003G363700 Sobic001G237600--Sobic003G363700 Sobic004G320700 Sobic004G320700 Sobic001G237600--Sobic004G320700 Sobic002G079000 Sobic002G079000 Sobic001G237600--Sobic002G079000 Sobic007G087000 Sobic007G087000 Sobic001G237600--Sobic007G087000 Sobic006G039400 Sobic006G039400 Sobic001G237600--Sobic006G039400 Sobic003G202600 Sobic003G202600 Sobic001G237600--Sobic003G202600 Sobic010G244900 Sobic010G244900 Sobic001G237600--Sobic010G244900 Sobic001G095000 Sobic001G095000 Sobic001G237600--Sobic001G095000 Sobic002G292900 Sobic002G292900 Sobic001G237600--Sobic002G292900 Sobic003G379200 Sobic003G379200 Sobic003G363700--Sobic003G379200 Sobic003G363700--Sobic001G237600 Sobic004G265500 Sobic004G265500 Sobic003G363700--Sobic004G265500 Sobic002G371700 Sobic002G371700 Sobic003G363700--Sobic002G371700 Sobic009G228000 Sobic009G228000 Sobic003G363700--Sobic009G228000 Sobic002G374300 Sobic002G374300 Sobic003G363700--Sobic002G374300 Sobic003G043000 Sobic003G043000 Sobic003G363700--Sobic003G043000 Sobic010G000800 Sobic010G000800 Sobic003G363700--Sobic010G000800 Sobic003G182300 Sobic003G182300 Sobic003G363700--Sobic003G182300 Sobic004G320700--Sobic002G292900 Sobic004G320700--Sobic001G237600 Sobic004G320700--Sobic002G079000 Sobic010G186100 Sobic010G186100 Sobic004G320700--Sobic010G186100 Sobic004G320700--Sobic010G244900 Sobic006G210700 Sobic006G210700 Sobic004G320700--Sobic006G210700 Sobic004G320700--Sobic007G087000 Sobic006G032300 Sobic006G032300 Sobic004G320700--Sobic006G032300 Sobic004G320700--Sobic009G228000 Sobic002G079000--Sobic007G087000 Sobic010G169900 Sobic010G169900 Sobic002G079000--Sobic010G169900 Sobic010G213500 Sobic010G213500 Sobic002G079000--Sobic010G213500 Sobic004G198600 Sobic004G198600 Sobic002G079000--Sobic004G198600 Sobic006G128100 Sobic006G128100 Sobic002G079000--Sobic006G128100 Sobic006G250800 Sobic006G250800 Sobic002G079000--Sobic006G250800 Sobic007G172700 Sobic007G172700 Sobic002G079000--Sobic007G172700 Sobic002G079000--Sobic001G237600 Sobic001G490900 Sobic001G490900 Sobic002G079000--Sobic001G490900 Sobic007G087000--Sobic002G079000 Sobic007G076400 Sobic007G076400 Sobic007G087000--Sobic007G076400 Sobic002G306100 Sobic002G306100 Sobic007G087000--Sobic002G306100 Sobic008G116700 Sobic008G116700 Sobic007G087000--Sobic008G116700 Sobic007G087000--Sobic006G250800 Sobic001G014200 Sobic001G014200 Sobic007G087000--Sobic001G014200 Sobic007G087000--Sobic001G237600 Sobic007G087000--Sobic007G172700 Sobic009G107300 Sobic009G107300 Sobic007G087000--Sobic009G107300 Sobic006G093300 Sobic006G093300 Sobic006G039400--Sobic006G093300 Sobic001G405600 Sobic001G405600 Sobic006G039400--Sobic001G405600 Sobic003G296900 Sobic003G296900 Sobic006G039400--Sobic003G296900 Sobic006G039400--Sobic001G237600 Sobic006G039400--Sobic003G182300 Sobic010G230600 Sobic010G230600 Sobic006G039400--Sobic010G230600 Sobic007G162100 Sobic007G162100 Sobic006G039400--Sobic007G162100 Sobic006G039400--Sobic007G087000 Sobic001G283600 Sobic001G283600 Sobic006G039400--Sobic001G283600 Sobic003G202600--Sobic001G095000 Sobic003G202600--Sobic002G079000 Sobic002G355800 Sobic002G355800 Sobic003G202600--Sobic002G355800 Sobic003G202600--Sobic007G087000 Sobic003G202600--Sobic001G237600 Sobic003G202600--Sobic010G169900 Sobic001G389200 Sobic001G389200 Sobic003G202600--Sobic001G389200 Sobic006G060000 Sobic006G060000 Sobic003G202600--Sobic006G060000 Sobic003G302200 Sobic003G302200 Sobic003G202600--Sobic003G302200 Sobic004G172500 Sobic004G172500 Sobic010G244900--Sobic004G172500 Sobic010G244900--Sobic002G292900 Sobic004G213800 Sobic004G213800 Sobic010G244900--Sobic004G213800 Sobic010G244900--Sobic001G237600 Sobic010G244900--Sobic004G320700 Sobic010G244900--Sobic006G039400 Sobic010G244900--Sobic003G043000 Sobic003G241700 Sobic003G241700 Sobic010G244900--Sobic003G241700 Sobic005G150600 Sobic005G150600 Sobic010G244900--Sobic005G150600 Sobic001G095000--Sobic003G202600 Sobic001G095000--Sobic007G087000 Sobic001G095000--Sobic001G237600 Sobic001G095000--Sobic002G079000 Sobic007G032000 Sobic007G032000 Sobic001G095000--Sobic007G032000 Sobic001G095000--Sobic003G302200 Sobic001G095000--Sobic007G076400 Sobic001G188400 Sobic001G188400 Sobic001G095000--Sobic001G188400 Sobic001G095000--Sobic008G116700 Sobic002G292900--Sobic004G320700 Sobic002G292900--Sobic010G244900 Sobic009G166600 Sobic009G166600 Sobic002G292900--Sobic009G166600 Sobic002G313900 Sobic002G313900 Sobic002G292900--Sobic002G313900 Sobic002G292900--Sobic006G032300 Sobic010G086600 Sobic010G086600 Sobic002G292900--Sobic010G086600 Sobic005G034700 Sobic005G034700 Sobic002G292900--Sobic005G034700 Sobic002G292900--Sobic001G237600 Sobic001G340300 Sobic001G340300 Sobic002G292900--Sobic001G340300
Octagon: transcription factors


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