Gene annotation
Transcriptome id Sobic.005G162900.2
Synonym
Functional annotation dnaJ domain containing protein, expressed
UniProt A0A1Z5RJD8
Pfam PF00226 PF11926
Panther DB PTHR24078 PTHR24078:SF297
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G18750 : DNAJ heat shock N-terminal domain-containing protein
RAP-DB (Rice) LOC_Os11g36960.1 : dnaJ domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK17391
Barley HORVU7Hr1G050080.16 , HORVU7Hr1G050080.17 , HORVU7Hr1G050080.14 , HORVU7Hr1G050080.15 , HORVU7Hr1G050080.12 , HORVU7Hr1G050080.13 , HORVU7Hr1G050080.10 , HORVU7Hr1G050080.11 , HORVU7Hr1G050080.18 , HORVU7Hr1G050080.19 , HORVU7Hr1G050080.24 , HORVU7Hr1G050080.23 , HORVU7Hr1G050080.22 , HORVU7Hr1G050080.21 , HORVU7Hr1G050080.20 , HORVU7Hr1G050080.4 , HORVU7Hr1G050080.5 , HORVU7Hr1G050080.6 , HORVU7Hr1G050080.7 , HORVU7Hr1G050080.1 , HORVU7Hr1G050080.2 , HORVU7Hr1G050080.3 , HORVU7Hr1G050080.8 , HORVU7Hr1G050080.9
Wheat TraesCS2A02G084900 , TraesCS2B02G099600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G071600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
2 Sobic.003G091200 seven in absentia protein family domain containing protein, expressed -
3 Sobic.006G271600 RNA recognition motif containing protein, putative, expressed K13126: polyadenylate-binding protein
4 Sobic.007G033700 OsFBX309 - F-box domain containing protein, expressed -
5 Sobic.009G243000 OsFBL2 - F-box domain and LRR containing protein, expressed -
6 Sobic.002G078900 agenet domain containing protein, expressed -
7 Sobic.005G163500 dnaJ domain containing protein, expressed -
8 Sobic.010G183800 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
9 Sobic.007G121700 YDG/SRA domain containing protein, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
10 Sobic.010G194600 CW-type Zinc Finger, putative, expressed -
11 Sobic.004G281000 MIKC-type MADS box transcription factors(PubMedID : 19749151)@OsMADS6 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
12 Sobic.003G046400 transcriptional corepressor LEUNIG, putative, expressed -
13 Sobic.001G457600 piwi domain containing protein, expressed -
14 Sobic.009G048300 transcription factor X1, putative, expressed -
15 Sobic.004G234600 expressed protein -
16 Sobic.001G455900 "qGL3-2/qLGY3(Ortholog in rice:Yu et al., 2018/Liu et al., 2018)"(PubMedID : 31659846)@determinacy of the spikelet meristem and determining the identity of lemmas and paleas(PubMedID : 15208396)@OsMADS1 - MADS-box family gene with MIKCc type-box, expressed -
17 Sobic.001G043500 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
18 Sobic.003G300000 expressed protein -
19 Sobic.004G149400 ankyrin, putative, expressed -
20 Sobic.009G063700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -


Gene co-expression network
sample Sobic005G162900 Sobic005G162900 Sobic001G071600 Sobic001G071600 Sobic005G162900--Sobic001G071600 Sobic003G091200 Sobic003G091200 Sobic005G162900--Sobic003G091200 Sobic006G271600 Sobic006G271600 Sobic005G162900--Sobic006G271600 Sobic007G033700 Sobic007G033700 Sobic005G162900--Sobic007G033700 Sobic009G243000 Sobic009G243000 Sobic005G162900--Sobic009G243000 Sobic002G078900 Sobic002G078900 Sobic005G162900--Sobic002G078900 Sobic005G163500 Sobic005G163500 Sobic005G162900--Sobic005G163500 Sobic010G183800 Sobic010G183800 Sobic005G162900--Sobic010G183800 Sobic007G121700 Sobic007G121700 Sobic005G162900--Sobic007G121700 Sobic001G071600--Sobic006G271600 Sobic003G046400 Sobic003G046400 Sobic001G071600--Sobic003G046400 Sobic001G071600--Sobic010G183800 Sobic001G071600--Sobic002G078900 Sobic009G048300 Sobic009G048300 Sobic001G071600--Sobic009G048300 Sobic001G071600--Sobic009G243000 Sobic001G456000 Sobic001G456000 Sobic001G071600--Sobic001G456000 Sobic003G300000 Sobic003G300000 Sobic001G071600--Sobic003G300000 Sobic004G281000 Sobic004G281000 Sobic001G071600--Sobic004G281000 Sobic002G196500 Sobic002G196500 Sobic003G091200--Sobic002G196500 Sobic003G091200--Sobic005G162900 Sobic004G149400 Sobic004G149400 Sobic003G091200--Sobic004G149400 Sobic001G137400 Sobic001G137400 Sobic003G091200--Sobic001G137400 Sobic001G171200 Sobic001G171200 Sobic003G091200--Sobic001G171200 Sobic003G091200--Sobic009G243000 Sobic003G022900 Sobic003G022900 Sobic003G091200--Sobic003G022900 Sobic004G220200 Sobic004G220200 Sobic003G091200--Sobic004G220200 Sobic001G457600 Sobic001G457600 Sobic003G091200--Sobic001G457600 Sobic006G271600--Sobic001G071600 Sobic010G194600 Sobic010G194600 Sobic006G271600--Sobic010G194600 Sobic003G117200 Sobic003G117200 Sobic006G271600--Sobic003G117200 Sobic006G271600--Sobic009G243000 Sobic006G271600--Sobic003G300000 Sobic006G271600--Sobic002G078900 Sobic006G271600--Sobic003G046400 Sobic006G271600--Sobic010G183800 Sobic003G088600 Sobic003G088600 Sobic006G271600--Sobic003G088600 Sobic007G033700--Sobic003G046400 Sobic007G033700--Sobic009G243000 Sobic001G137600 Sobic001G137600 Sobic007G033700--Sobic001G137600 Sobic001G455900 Sobic001G455900 Sobic007G033700--Sobic001G455900 Sobic006G163300 Sobic006G163300 Sobic007G033700--Sobic006G163300 Sobic010G070900 Sobic010G070900 Sobic007G033700--Sobic010G070900 Sobic007G033700--Sobic006G271600 Sobic007G033700--Sobic001G071600 Sobic004G237000 Sobic004G237000 Sobic007G033700--Sobic004G237000 Sobic009G243000--Sobic007G033700 Sobic009G243000--Sobic002G078900 Sobic009G243000--Sobic006G271600 Sobic009G243000--Sobic001G071600 Sobic002G205000 Sobic002G205000 Sobic009G243000--Sobic002G205000 Sobic003G006000 Sobic003G006000 Sobic009G243000--Sobic003G006000 Sobic009G243000--Sobic003G046400 Sobic009G243000--Sobic001G137600 Sobic002G258000 Sobic002G258000 Sobic009G243000--Sobic002G258000 Sobic002G078900--Sobic001G456000 Sobic002G078900--Sobic010G183800 Sobic001G459400 Sobic001G459400 Sobic002G078900--Sobic001G459400 Sobic002G078900--Sobic003G300000 Sobic001G106500 Sobic001G106500 Sobic002G078900--Sobic001G106500 Sobic002G078900--Sobic001G071600 Sobic001G459300 Sobic001G459300 Sobic002G078900--Sobic001G459300 Sobic003G092300 Sobic003G092300 Sobic002G078900--Sobic003G092300 Sobic002G078900--Sobic009G243000 Sobic005G163500--Sobic001G071600 Sobic005G163500--Sobic004G281000 Sobic005G163500--Sobic009G243000 Sobic005G163500--Sobic010G183800 Sobic005G163500--Sobic001G457600 Sobic005G163500--Sobic001G456000 Sobic007G121200 Sobic007G121200 Sobic005G163500--Sobic007G121200 Sobic005G163500--Sobic002G078900 Sobic005G163500--Sobic003G046400 Sobic010G183800--Sobic003G092300 Sobic010G183800--Sobic001G459400 Sobic010G183800--Sobic002G078900 Sobic010G183800--Sobic003G300000 Sobic010G183800--Sobic001G456000 Sobic009G063700 Sobic009G063700 Sobic010G183800--Sobic009G063700 Sobic010G183800--Sobic001G071600 Sobic001G158100 Sobic001G158100 Sobic010G183800--Sobic001G158100 Sobic010G183800--Sobic001G106500 Sobic007G121700--Sobic005G162900 Sobic001G043500 Sobic001G043500 Sobic007G121700--Sobic001G043500 Sobic001G463301 Sobic001G463301 Sobic007G121700--Sobic001G463301 Sobic003G008800 Sobic003G008800 Sobic007G121700--Sobic003G008800 Sobic003G243000 Sobic003G243000 Sobic007G121700--Sobic003G243000 Sobic007G121700--Sobic003G091200 Sobic007G121700--Sobic010G183800 Sobic007G121700--Sobic002G078900 Sobic007G121700--Sobic001G456000
Octagon: transcription factors


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