Gene annotation
Transcriptome id Sobic.007G121700.1
Synonym SUVH5, Sb07g019860, SGD9
Functional annotation YDG/SRA domain containing protein, expressed
UniProt C5YKQ5
Pfam PF05033 PF00856 PF02182
Panther DB PTHR22884 PTHR22884:SF349
NCBI CDD KOG1082; Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing
KEGG Orthology K11420; [histone H3]-lysine9 N-trimethyltransferase EHMT
Gene Ontology GO:0018024; histone-lysine N-methyltransferase activity GO:0008270zinc ion binding GO:0005634nucleus GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT2G35160 : SU(VAR)3-9 homolog 5
RAP-DB (Rice) LOC_Os08g30910.1 : YDG/SRA domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G162900 dnaJ domain containing protein, expressed -
2 Sobic.001G043500 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
3 Sobic.001G463301 - -
4 Sobic.003G008800 expressed protein -
5 Sobic.003G243000 expressed protein -
6 Sobic.003G091200 seven in absentia protein family domain containing protein, expressed -
7 Sobic.010G183800 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
8 Sobic.002G078900 agenet domain containing protein, expressed -
9 Sobic.001G456000 YABBY domain containing protein, putative, expressed -
10 Sobic.009G063700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
11 Sobic.002G355600 - -
12 Sobic.003G295100 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.001G459400 B3 DNA binding domain containing protein, expressed -
14 Sobic.004G326800 expressed protein -
15 Sobic.007G121200 YDG/SRA domain containing protein, expressed -
16 Sobic.007G023100 CCT motif family protein, expressed -
17 Sobic.004G281000 MIKC-type MADS box transcription factors(PubMedID : 19749151)@OsMADS6 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
18 Sobic.009G075500 OsMADS58 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant
19 Sobic.004G234600 expressed protein -
20 Sobic.005G166100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein


Gene co-expression network
sample Sobic007G121700 Sobic007G121700 Sobic005G162900 Sobic005G162900 Sobic007G121700--Sobic005G162900 Sobic001G043500 Sobic001G043500 Sobic007G121700--Sobic001G043500 Sobic001G463301 Sobic001G463301 Sobic007G121700--Sobic001G463301 Sobic003G008800 Sobic003G008800 Sobic007G121700--Sobic003G008800 Sobic003G243000 Sobic003G243000 Sobic007G121700--Sobic003G243000 Sobic003G091200 Sobic003G091200 Sobic007G121700--Sobic003G091200 Sobic010G183800 Sobic010G183800 Sobic007G121700--Sobic010G183800 Sobic002G078900 Sobic002G078900 Sobic007G121700--Sobic002G078900 Sobic001G456000 Sobic001G456000 Sobic007G121700--Sobic001G456000 Sobic001G071600 Sobic001G071600 Sobic005G162900--Sobic001G071600 Sobic005G162900--Sobic003G091200 Sobic006G271600 Sobic006G271600 Sobic005G162900--Sobic006G271600 Sobic007G033700 Sobic007G033700 Sobic005G162900--Sobic007G033700 Sobic009G243000 Sobic009G243000 Sobic005G162900--Sobic009G243000 Sobic005G162900--Sobic002G078900 Sobic005G163500 Sobic005G163500 Sobic005G162900--Sobic005G163500 Sobic005G162900--Sobic010G183800 Sobic005G162900--Sobic007G121700 Sobic007G161600 Sobic007G161600 Sobic001G043500--Sobic007G161600 Sobic001G043500--Sobic005G162900 Sobic001G043500--Sobic002G078900 Sobic002G205000 Sobic002G205000 Sobic001G043500--Sobic002G205000 Sobic001G043500--Sobic007G121700 Sobic001G043500--Sobic007G033700 Sobic001G043500--Sobic001G463301 Sobic001G043500--Sobic003G091200 Sobic002G178700 Sobic002G178700 Sobic001G043500--Sobic002G178700 Sobic003G300000 Sobic003G300000 Sobic001G463301--Sobic003G300000 Sobic001G463301--Sobic010G183800 Sobic003G092300 Sobic003G092300 Sobic001G463301--Sobic003G092300 Sobic009G063700 Sobic009G063700 Sobic001G463301--Sobic009G063700 Sobic001G459400 Sobic001G459400 Sobic001G463301--Sobic001G459400 Sobic001G158100 Sobic001G158100 Sobic001G463301--Sobic001G158100 Sobic009G075500 Sobic009G075500 Sobic001G463301--Sobic009G075500 Sobic001G463301--Sobic002G078900 Sobic004G234600 Sobic004G234600 Sobic001G463301--Sobic004G234600 Sobic005G062600 Sobic005G062600 Sobic003G008800--Sobic005G062600 Sobic005G020100 Sobic005G020100 Sobic003G008800--Sobic005G020100 Sobic003G090600 Sobic003G090600 Sobic003G008800--Sobic003G090600 Sobic007G023100 Sobic007G023100 Sobic003G008800--Sobic007G023100 Sobic003G008800--Sobic007G161600 Sobic010G092400 Sobic010G092400 Sobic003G008800--Sobic010G092400 Sobic003G085900 Sobic003G085900 Sobic003G008800--Sobic003G085900 Sobic002G430700 Sobic002G430700 Sobic003G008800--Sobic002G430700 Sobic003G129200 Sobic003G129200 Sobic003G008800--Sobic003G129200 Sobic003G404800 Sobic003G404800 Sobic003G243000--Sobic003G404800 Sobic003G243000--Sobic007G121700 Sobic003G092400 Sobic003G092400 Sobic003G243000--Sobic003G092400 Sobic007G121200 Sobic007G121200 Sobic003G243000--Sobic007G121200 Sobic003G108500 Sobic003G108500 Sobic003G243000--Sobic003G108500 Sobic003G243000--Sobic003G092300 Sobic003G243000--Sobic001G463301 Sobic003G250100 Sobic003G250100 Sobic003G243000--Sobic003G250100 Sobic002G180100 Sobic002G180100 Sobic003G243000--Sobic002G180100 Sobic002G196500 Sobic002G196500 Sobic003G091200--Sobic002G196500 Sobic003G091200--Sobic005G162900 Sobic004G149400 Sobic004G149400 Sobic003G091200--Sobic004G149400 Sobic001G137400 Sobic001G137400 Sobic003G091200--Sobic001G137400 Sobic001G171200 Sobic001G171200 Sobic003G091200--Sobic001G171200 Sobic003G091200--Sobic009G243000 Sobic003G022900 Sobic003G022900 Sobic003G091200--Sobic003G022900 Sobic004G220200 Sobic004G220200 Sobic003G091200--Sobic004G220200 Sobic001G457600 Sobic001G457600 Sobic003G091200--Sobic001G457600 Sobic010G183800--Sobic003G092300 Sobic010G183800--Sobic001G459400 Sobic010G183800--Sobic002G078900 Sobic010G183800--Sobic003G300000 Sobic010G183800--Sobic001G456000 Sobic010G183800--Sobic009G063700 Sobic010G183800--Sobic001G071600 Sobic010G183800--Sobic001G158100 Sobic001G106500 Sobic001G106500 Sobic010G183800--Sobic001G106500 Sobic002G078900--Sobic001G456000 Sobic002G078900--Sobic010G183800 Sobic002G078900--Sobic001G459400 Sobic002G078900--Sobic003G300000 Sobic002G078900--Sobic001G106500 Sobic002G078900--Sobic001G071600 Sobic001G459300 Sobic001G459300 Sobic002G078900--Sobic001G459300 Sobic002G078900--Sobic003G092300 Sobic002G078900--Sobic009G243000 Sobic001G456000--Sobic002G078900 Sobic001G456000--Sobic010G183800 Sobic001G456000--Sobic001G459300 Sobic010G048600 Sobic010G048600 Sobic001G456000--Sobic010G048600 Sobic001G456000--Sobic001G459400 Sobic001G456000--Sobic001G106500 Sobic005G070700 Sobic005G070700 Sobic001G456000--Sobic005G070700 Sobic003G243100 Sobic003G243100 Sobic001G456000--Sobic003G243100 Sobic004G277700 Sobic004G277700 Sobic001G456000--Sobic004G277700
Octagon: transcription factors


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