Gene annotation
Transcriptome id Sobic.003G243000.3
Synonym Sb03g029940
Functional annotation expressed protein
UniProt A0A1W0VYS4
Pfam -
Panther DB PTHR34380:SF2 PTHR34380
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g46840.1 : expressed protein
MaizeGDB (Corn) Zm00025a028189
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G404800 OsFBO21 - F-box and other domain containing protein, expressed -
2 Sobic.007G121700 YDG/SRA domain containing protein, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
3 Sobic.003G092400 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
4 Sobic.007G121200 YDG/SRA domain containing protein, expressed -
5 Sobic.003G108500 glycosyltransferase, putative, expressed -
6 Sobic.003G092300 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
7 Sobic.001G463301 - -
8 Sobic.003G250100 homeobox domain containing protein, expressed -
9 Sobic.002G180100 hypersensitive-induced response protein, putative, expressed -
10 Sobic.007G137101 R2R3 MYB transcription factor(PubMedID : 33633216) K09422: transcription factor MYB, plant
11 Sobic.001G158100 MBTB43 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
12 Sobic.004G326800 expressed protein -
13 Sobic.003G091200 seven in absentia protein family domain containing protein, expressed -
14 Sobic.010G183800 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
15 Sobic.001G456000 YABBY domain containing protein, putative, expressed -
16 Sobic.005G162900 dnaJ domain containing protein, expressed -
17 Sobic.007G199600 MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
18 Sobic.004G299200 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
19 Sobic.005G189500 expressed protein -
20 Sobic.004G281000 MIKC-type MADS box transcription factors(PubMedID : 19749151)@OsMADS6 - MADS-box family gene with MIKCc type-box, expressed K09264: MADS-box transcription factor, plant


Gene co-expression network
sample Sobic003G243000 Sobic003G243000 Sobic003G404800 Sobic003G404800 Sobic003G243000--Sobic003G404800 Sobic007G121700 Sobic007G121700 Sobic003G243000--Sobic007G121700 Sobic003G092400 Sobic003G092400 Sobic003G243000--Sobic003G092400 Sobic007G121200 Sobic007G121200 Sobic003G243000--Sobic007G121200 Sobic003G108500 Sobic003G108500 Sobic003G243000--Sobic003G108500 Sobic003G092300 Sobic003G092300 Sobic003G243000--Sobic003G092300 Sobic001G463301 Sobic001G463301 Sobic003G243000--Sobic001G463301 Sobic003G250100 Sobic003G250100 Sobic003G243000--Sobic003G250100 Sobic002G180100 Sobic002G180100 Sobic003G243000--Sobic002G180100 Sobic003G404800--Sobic003G092300 Sobic003G404800--Sobic003G092400 Sobic007G137101 Sobic007G137101 Sobic003G404800--Sobic007G137101 Sobic010G183800 Sobic010G183800 Sobic003G404800--Sobic010G183800 Sobic010G048600 Sobic010G048600 Sobic003G404800--Sobic010G048600 Sobic001G456000 Sobic001G456000 Sobic003G404800--Sobic001G456000 Sobic001G158100 Sobic001G158100 Sobic003G404800--Sobic001G158100 Sobic001G459400 Sobic001G459400 Sobic003G404800--Sobic001G459400 Sobic001G106500 Sobic001G106500 Sobic003G404800--Sobic001G106500 Sobic005G162900 Sobic005G162900 Sobic007G121700--Sobic005G162900 Sobic001G043500 Sobic001G043500 Sobic007G121700--Sobic001G043500 Sobic007G121700--Sobic001G463301 Sobic003G008800 Sobic003G008800 Sobic007G121700--Sobic003G008800 Sobic007G121700--Sobic003G243000 Sobic003G091200 Sobic003G091200 Sobic007G121700--Sobic003G091200 Sobic007G121700--Sobic010G183800 Sobic002G078900 Sobic002G078900 Sobic007G121700--Sobic002G078900 Sobic007G121700--Sobic001G456000 Sobic003G092400--Sobic007G121200 Sobic003G092400--Sobic001G456000 Sobic004G254300 Sobic004G254300 Sobic003G092400--Sobic004G254300 Sobic002G344201 Sobic002G344201 Sobic003G092400--Sobic002G344201 Sobic009G019550 Sobic009G019550 Sobic003G092400--Sobic009G019550 Sobic002G268300 Sobic002G268300 Sobic003G092400--Sobic002G268300 Sobic003G243100 Sobic003G243100 Sobic003G092400--Sobic003G243100 Sobic010G237400 Sobic010G237400 Sobic003G092400--Sobic010G237400 Sobic003G092400--Sobic001G106500 Sobic007G121200--Sobic003G092400 Sobic007G121200--Sobic001G456000 Sobic003G046400 Sobic003G046400 Sobic007G121200--Sobic003G046400 Sobic007G121200--Sobic010G183800 Sobic001G071600 Sobic001G071600 Sobic007G121200--Sobic001G071600 Sobic007G121200--Sobic002G078900 Sobic010G220800 Sobic010G220800 Sobic007G121200--Sobic010G220800 Sobic007G121200--Sobic002G344201 Sobic007G121200--Sobic007G137101 Sobic006G097300 Sobic006G097300 Sobic003G108500--Sobic006G097300 Sobic003G381100 Sobic003G381100 Sobic003G108500--Sobic003G381100 Sobic002G239000 Sobic002G239000 Sobic003G108500--Sobic002G239000 Sobic003G108500--Sobic001G158100 Sobic004G056000 Sobic004G056000 Sobic003G108500--Sobic004G056000 Sobic005G166100 Sobic005G166100 Sobic003G108500--Sobic005G166100 Sobic008G072900 Sobic008G072900 Sobic003G108500--Sobic008G072900 Sobic001G216400 Sobic001G216400 Sobic003G108500--Sobic001G216400 Sobic003G063700 Sobic003G063700 Sobic003G108500--Sobic003G063700 Sobic003G092300--Sobic001G459400 Sobic003G092300--Sobic010G183800 Sobic001G459300 Sobic001G459300 Sobic003G092300--Sobic001G459300 Sobic003G092300--Sobic001G106500 Sobic003G300000 Sobic003G300000 Sobic003G092300--Sobic003G300000 Sobic003G092300--Sobic010G048600 Sobic009G075500 Sobic009G075500 Sobic003G092300--Sobic009G075500 Sobic003G092300--Sobic001G158100 Sobic005G070700 Sobic005G070700 Sobic003G092300--Sobic005G070700 Sobic001G463301--Sobic003G300000 Sobic001G463301--Sobic010G183800 Sobic001G463301--Sobic003G092300 Sobic009G063700 Sobic009G063700 Sobic001G463301--Sobic009G063700 Sobic001G463301--Sobic001G459400 Sobic001G463301--Sobic001G158100 Sobic001G463301--Sobic009G075500 Sobic001G463301--Sobic002G078900 Sobic004G234600 Sobic004G234600 Sobic001G463301--Sobic004G234600 Sobic003G250100--Sobic004G234600 Sobic004G281000 Sobic004G281000 Sobic003G250100--Sobic004G281000 Sobic003G250100--Sobic010G183800 Sobic002G196500 Sobic002G196500 Sobic003G250100--Sobic002G196500 Sobic003G250100--Sobic001G456000 Sobic010G255000 Sobic010G255000 Sobic003G250100--Sobic010G255000 Sobic003G250100--Sobic002G078900 Sobic003G250100--Sobic001G071600 Sobic001G457600 Sobic001G457600 Sobic003G250100--Sobic001G457600 Sobic002G180100--Sobic003G243000 Sobic002G306500 Sobic002G306500 Sobic002G180100--Sobic002G306500 Sobic004G299200 Sobic004G299200 Sobic002G180100--Sobic004G299200 Sobic007G192900 Sobic007G192900 Sobic002G180100--Sobic007G192900 Sobic001G497800 Sobic001G497800 Sobic002G180100--Sobic001G497800 Sobic003G092000 Sobic003G092000 Sobic002G180100--Sobic003G092000 Sobic005G141200 Sobic005G141200 Sobic002G180100--Sobic005G141200 Sobic003G156700 Sobic003G156700 Sobic002G180100--Sobic003G156700 Sobic009G211300 Sobic009G211300 Sobic002G180100--Sobic009G211300
Octagon: transcription factors


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