Gene annotation
Transcriptome id Sobic.007G199600.2,Sobic.007G199600.1
Synonym BPM1, ATBPM1, Sb07g026750
Functional annotation MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
UniProt A0A1Z5RAT0 , A0A1B6PIW2
Pfam PF00651
Panther DB PTHR24413 PTHR24413:SF130
NCBI CDD KOG1987; Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G19000 : BTB-POZ and MATH domain 1
RAP-DB (Rice) LOC_Os08g41190.1 : MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
MaizeGDB (Corn) Zm00025a030371
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G199600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G232900 expressed protein -
2 Sobic.001G183500 cysteine proteinase inhibitor precursor, putative, expressed -
3 Sobic.001G079900 expressed protein -
4 Sobic.004G199200 expressed protein K10858: DNA mismatch repair protein PMS2
5 Sobic.002G050700 tesmin/TSO1-like CXC domain containing protein, expressed -
6 Sobic.009G077300 protein kinase, putative, expressed -
7 Sobic.010G255000 uncharacterized protein At4g06744 precursor, putative, expressed -
8 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
9 Sobic.007G121600 - -
10 Sobic.008G151600 PMR5, putative, expressed -
11 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -
12 Sobic.007G161600 SET domain containing protein, expressed -
13 Sobic.006G171050 - -
14 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
15 Sobic.002G196500 linker histone H1 and H5 family protein, expressed -
16 Sobic.009G105400 OsFBX135 - F-box domain containing protein, expressed -
17 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
18 Sobic.002G255600 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
19 Sobic.003G212600 ubiquitin-conjugating enzyme, putative, expressed K13960: UBE2T, ubiquitin-conjugating enzyme E2 T
20 Sobic.009G057800 kelch repeat-containing protein, putative, expressed -


Gene co-expression network
sample Sobic007G199600 Sobic007G199600 Sobic006G232900 Sobic006G232900 Sobic007G199600--Sobic006G232900 Sobic001G183500 Sobic001G183500 Sobic007G199600--Sobic001G183500 Sobic001G079900 Sobic001G079900 Sobic007G199600--Sobic001G079900 Sobic004G199200 Sobic004G199200 Sobic007G199600--Sobic004G199200 Sobic002G050700 Sobic002G050700 Sobic007G199600--Sobic002G050700 Sobic009G077300 Sobic009G077300 Sobic007G199600--Sobic009G077300 Sobic010G255000 Sobic010G255000 Sobic007G199600--Sobic010G255000 Sobic005G062600 Sobic005G062600 Sobic007G199600--Sobic005G062600 Sobic007G121600 Sobic007G121600 Sobic007G199600--Sobic007G121600 Sobic006G221800 Sobic006G221800 Sobic006G232900--Sobic006G221800 Sobic005G168400 Sobic005G168400 Sobic006G232900--Sobic005G168400 Sobic001G143400 Sobic001G143400 Sobic006G232900--Sobic001G143400 Sobic004G003700 Sobic004G003700 Sobic006G232900--Sobic004G003700 Sobic001G101700 Sobic001G101700 Sobic006G232900--Sobic001G101700 Sobic006G232900--Sobic010G255000 Sobic004G198100 Sobic004G198100 Sobic006G232900--Sobic004G198100 Sobic010G220800 Sobic010G220800 Sobic006G232900--Sobic010G220800 Sobic007G147200 Sobic007G147200 Sobic006G232900--Sobic007G147200 Sobic009G000600 Sobic009G000600 Sobic001G183500--Sobic009G000600 Sobic001G183500--Sobic002G050700 Sobic001G183500--Sobic001G079900 Sobic006G171050 Sobic006G171050 Sobic001G183500--Sobic006G171050 Sobic004G326800 Sobic004G326800 Sobic001G183500--Sobic004G326800 Sobic001G183500--Sobic009G077300 Sobic001G183500--Sobic007G199600 Sobic001G038450 Sobic001G038450 Sobic001G183500--Sobic001G038450 Sobic010G026100 Sobic010G026100 Sobic001G183500--Sobic010G026100 Sobic005G032600 Sobic005G032600 Sobic001G079900--Sobic005G032600 Sobic001G384700 Sobic001G384700 Sobic001G079900--Sobic001G384700 Sobic001G079900--Sobic005G062600 Sobic001G079900--Sobic002G050700 Sobic003G351900 Sobic003G351900 Sobic001G079900--Sobic003G351900 Sobic001G493900 Sobic001G493900 Sobic001G079900--Sobic001G493900 Sobic008G151600 Sobic008G151600 Sobic001G079900--Sobic008G151600 Sobic002G027600 Sobic002G027600 Sobic001G079900--Sobic002G027600 Sobic009G141700 Sobic009G141700 Sobic001G079900--Sobic009G141700 Sobic009G216500 Sobic009G216500 Sobic004G199200--Sobic009G216500 Sobic009G148200 Sobic009G148200 Sobic004G199200--Sobic009G148200 Sobic009G105400 Sobic009G105400 Sobic004G199200--Sobic009G105400 Sobic006G022400 Sobic006G022400 Sobic004G199200--Sobic006G022400 Sobic001G264201 Sobic001G264201 Sobic004G199200--Sobic001G264201 Sobic003G104100 Sobic003G104100 Sobic004G199200--Sobic003G104100 Sobic001G395200 Sobic001G395200 Sobic004G199200--Sobic001G395200 Sobic010G277200 Sobic010G277200 Sobic004G199200--Sobic010G277200 Sobic010G013500 Sobic010G013500 Sobic004G199200--Sobic010G013500 Sobic002G050700--Sobic006G221800 Sobic001G390400 Sobic001G390400 Sobic002G050700--Sobic001G390400 Sobic001G054700 Sobic001G054700 Sobic002G050700--Sobic001G054700 Sobic002G050700--Sobic001G079900 Sobic002G050700--Sobic009G077300 Sobic002G050700--Sobic004G003700 Sobic002G050700--Sobic001G101700 Sobic001G496400 Sobic001G496400 Sobic002G050700--Sobic001G496400 Sobic006G221300 Sobic006G221300 Sobic002G050700--Sobic006G221300 Sobic005G153000 Sobic005G153000 Sobic009G077300--Sobic005G153000 Sobic009G077300--Sobic006G221300 Sobic009G077300--Sobic001G054700 Sobic005G163400 Sobic005G163400 Sobic009G077300--Sobic005G163400 Sobic002G168000 Sobic002G168000 Sobic009G077300--Sobic002G168000 Sobic009G077300--Sobic002G050700 Sobic004G282601 Sobic004G282601 Sobic009G077300--Sobic004G282601 Sobic009G143200 Sobic009G143200 Sobic009G077300--Sobic009G143200 Sobic007G187700 Sobic007G187700 Sobic009G077300--Sobic007G187700 Sobic010G255000--Sobic007G147200 Sobic010G255000--Sobic001G101700 Sobic007G201900 Sobic007G201900 Sobic010G255000--Sobic007G201900 Sobic003G046400 Sobic003G046400 Sobic010G255000--Sobic003G046400 Sobic002G255600 Sobic002G255600 Sobic010G255000--Sobic002G255600 Sobic007G137101 Sobic007G137101 Sobic010G255000--Sobic007G137101 Sobic001G106500 Sobic001G106500 Sobic010G255000--Sobic001G106500 Sobic007G121200 Sobic007G121200 Sobic010G255000--Sobic007G121200 Sobic010G255000--Sobic010G220800 Sobic004G267600 Sobic004G267600 Sobic005G062600--Sobic004G267600 Sobic010G092400 Sobic010G092400 Sobic005G062600--Sobic010G092400 Sobic005G062600--Sobic007G121600 Sobic005G062600--Sobic001G079900 Sobic010G129700 Sobic010G129700 Sobic005G062600--Sobic010G129700 Sobic007G161600 Sobic007G161600 Sobic005G062600--Sobic007G161600 Sobic005G062600--Sobic001G493900 Sobic008G070700 Sobic008G070700 Sobic005G062600--Sobic008G070700 Sobic003G019900 Sobic003G019900 Sobic005G062600--Sobic003G019900 Sobic007G121650 Sobic007G121650 Sobic007G121600--Sobic007G121650 Sobic007G121600--Sobic005G062600 Sobic007G121600--Sobic010G092400 Sobic009G184200 Sobic009G184200 Sobic007G121600--Sobic009G184200 Sobic007G121600--Sobic002G050700 Sobic002G317700 Sobic002G317700 Sobic007G121600--Sobic002G317700 Sobic003G393100 Sobic003G393100 Sobic007G121600--Sobic003G393100 Sobic002G021200 Sobic002G021200 Sobic007G121600--Sobic002G021200 Sobic004G317000 Sobic004G317000 Sobic007G121600--Sobic004G317000
Octagon: transcription factors


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