Gene annotation
Transcriptome id Sobic.006G171050.2,Sobic.006G171050.1
Synonym -
Functional annotation -
UniProt A0A1Z5RFD5 , A0A1Z5RF75
Pfam -
Panther DB PTHR33779 PTHR33779:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G02070 : -
RAP-DB (Rice) LOC_Os04g46600.1 : zinc finger protein, putative, expressed
MaizeGDB (Corn) Zm00025a056868 , Zm00025a010311
Brachypodium KQJ83946 , KQK00617
Barley HORVU2Hr1G097640.1 , HORVU2Hr1G097700.3 , HORVU2Hr1G097700.2 , HORVU2Hr1G097700.1
Wheat TraesCS6A02G250100 , TraesCS2B02G432600 , TraesCS6B02G275300 , TraesCS2A02G413800 , TraesCS6D02G231900 , TraesCS2D02G410800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G050700 tesmin/TSO1-like CXC domain containing protein, expressed -
2 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
3 Sobic.002G392500 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
4 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -
5 Sobic.001G183500 cysteine proteinase inhibitor precursor, putative, expressed -
6 Sobic.009G077300 protein kinase, putative, expressed -
7 Sobic.010G261700 SHI, putative, expressed -
8 Sobic.006G221300 expressed protein -
9 Sobic.006G232900 expressed protein -
10 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
11 Sobic.004G003700 Trihelix Family(PubMedID : 24864043)@expressed protein -
12 Sobic.001G038450 - -
13 Sobic.001G496400 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
14 Sobic.001G079900 expressed protein -
15 Sobic.004G273000 MYB family transcription factor, putative, expressed -
16 Sobic.005G168400 expressed protein -
17 Sobic.002G255600 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
18 Sobic.004G282601 - -
19 Sobic.002G360500 expressed protein -
20 Sobic.010G255000 uncharacterized protein At4g06744 precursor, putative, expressed -


Gene co-expression network
sample Sobic006G171050 Sobic006G171050 Sobic002G050700 Sobic002G050700 Sobic006G171050--Sobic002G050700 Sobic001G101700 Sobic001G101700 Sobic006G171050--Sobic001G101700 Sobic002G392500 Sobic002G392500 Sobic006G171050--Sobic002G392500 Sobic006G221800 Sobic006G221800 Sobic006G171050--Sobic006G221800 Sobic001G183500 Sobic001G183500 Sobic006G171050--Sobic001G183500 Sobic009G077300 Sobic009G077300 Sobic006G171050--Sobic009G077300 Sobic010G261700 Sobic010G261700 Sobic006G171050--Sobic010G261700 Sobic006G221300 Sobic006G221300 Sobic006G171050--Sobic006G221300 Sobic006G232900 Sobic006G232900 Sobic006G171050--Sobic006G232900 Sobic002G050700--Sobic006G221800 Sobic001G390400 Sobic001G390400 Sobic002G050700--Sobic001G390400 Sobic001G054700 Sobic001G054700 Sobic002G050700--Sobic001G054700 Sobic001G079900 Sobic001G079900 Sobic002G050700--Sobic001G079900 Sobic002G050700--Sobic009G077300 Sobic004G003700 Sobic004G003700 Sobic002G050700--Sobic004G003700 Sobic002G050700--Sobic001G101700 Sobic001G496400 Sobic001G496400 Sobic002G050700--Sobic001G496400 Sobic002G050700--Sobic006G221300 Sobic001G101700--Sobic006G221800 Sobic010G255000 Sobic010G255000 Sobic001G101700--Sobic010G255000 Sobic001G101700--Sobic004G003700 Sobic007G147200 Sobic007G147200 Sobic001G101700--Sobic007G147200 Sobic007G201900 Sobic007G201900 Sobic001G101700--Sobic007G201900 Sobic007G209200 Sobic007G209200 Sobic001G101700--Sobic007G209200 Sobic008G151600 Sobic008G151600 Sobic001G101700--Sobic008G151600 Sobic009G057800 Sobic009G057800 Sobic001G101700--Sobic009G057800 Sobic001G143400 Sobic001G143400 Sobic001G101700--Sobic001G143400 Sobic004G273000 Sobic004G273000 Sobic002G392500--Sobic004G273000 Sobic002G230800 Sobic002G230800 Sobic002G392500--Sobic002G230800 Sobic006G124400 Sobic006G124400 Sobic002G392500--Sobic006G124400 Sobic002G392500--Sobic010G261700 Sobic007G218100 Sobic007G218100 Sobic002G392500--Sobic007G218100 Sobic007G027900 Sobic007G027900 Sobic002G392500--Sobic007G027900 Sobic004G052200 Sobic004G052200 Sobic002G392500--Sobic004G052200 Sobic010G227200 Sobic010G227200 Sobic002G392500--Sobic010G227200 Sobic010G191000 Sobic010G191000 Sobic002G392500--Sobic010G191000 Sobic006G221800--Sobic001G496400 Sobic006G221800--Sobic001G101700 Sobic008G114900 Sobic008G114900 Sobic006G221800--Sobic008G114900 Sobic006G221800--Sobic004G003700 Sobic006G221800--Sobic002G050700 Sobic006G221800--Sobic008G151600 Sobic002G319300 Sobic002G319300 Sobic006G221800--Sobic002G319300 Sobic009G087700 Sobic009G087700 Sobic006G221800--Sobic009G087700 Sobic001G493900 Sobic001G493900 Sobic006G221800--Sobic001G493900 Sobic009G000600 Sobic009G000600 Sobic001G183500--Sobic009G000600 Sobic001G183500--Sobic002G050700 Sobic001G183500--Sobic001G079900 Sobic001G183500--Sobic006G171050 Sobic004G326800 Sobic004G326800 Sobic001G183500--Sobic004G326800 Sobic001G183500--Sobic009G077300 Sobic007G199600 Sobic007G199600 Sobic001G183500--Sobic007G199600 Sobic001G038450 Sobic001G038450 Sobic001G183500--Sobic001G038450 Sobic010G026100 Sobic010G026100 Sobic001G183500--Sobic010G026100 Sobic005G153000 Sobic005G153000 Sobic009G077300--Sobic005G153000 Sobic009G077300--Sobic006G221300 Sobic009G077300--Sobic001G054700 Sobic005G163400 Sobic005G163400 Sobic009G077300--Sobic005G163400 Sobic002G168000 Sobic002G168000 Sobic009G077300--Sobic002G168000 Sobic009G077300--Sobic002G050700 Sobic004G282601 Sobic004G282601 Sobic009G077300--Sobic004G282601 Sobic009G143200 Sobic009G143200 Sobic009G077300--Sobic009G143200 Sobic007G187700 Sobic007G187700 Sobic009G077300--Sobic007G187700 Sobic002G255600 Sobic002G255600 Sobic010G261700--Sobic002G255600 Sobic010G261700--Sobic004G273000 Sobic010G261700--Sobic002G392500 Sobic008G032800 Sobic008G032800 Sobic010G261700--Sobic008G032800 Sobic006G076000 Sobic006G076000 Sobic010G261700--Sobic006G076000 Sobic001G477400 Sobic001G477400 Sobic010G261700--Sobic001G477400 Sobic010G261700--Sobic007G027900 Sobic010G261700--Sobic010G255000 Sobic010G261700--Sobic001G101700 Sobic009G127800 Sobic009G127800 Sobic006G221300--Sobic009G127800 Sobic006G221300--Sobic001G054700 Sobic006G221300--Sobic009G077300 Sobic006G221300--Sobic005G153000 Sobic006G221300--Sobic009G143200 Sobic004G108400 Sobic004G108400 Sobic006G221300--Sobic004G108400 Sobic006G221300--Sobic004G052200 Sobic009G225500 Sobic009G225500 Sobic006G221300--Sobic009G225500 Sobic008G052300 Sobic008G052300 Sobic006G221300--Sobic008G052300 Sobic006G232900--Sobic006G221800 Sobic005G168400 Sobic005G168400 Sobic006G232900--Sobic005G168400 Sobic006G232900--Sobic001G143400 Sobic006G232900--Sobic004G003700 Sobic006G232900--Sobic001G101700 Sobic006G232900--Sobic010G255000 Sobic004G198100 Sobic004G198100 Sobic006G232900--Sobic004G198100 Sobic010G220800 Sobic010G220800 Sobic006G232900--Sobic010G220800 Sobic006G232900--Sobic007G147200
Octagon: transcription factors


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