Gene annotation
Transcriptome id Sobic.010G261700.1
Synonym SHI, Sb10g029800
Functional annotation SHI, putative, expressed
UniProt C5Z1S1
Pfam PF05142
Panther DB PTHR31604 PTHR31604:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G66350 : Lateral root primordium (LRP) protein-related
RAP-DB (Rice) LOC_Os06g49830.1 : SHI, putative, expressed
MaizeGDB (Corn) Zm00025a021389 , Zm00025a041742 , Zm00025a034204 , Zm00025a018462
Brachypodium KQK17519
Barley HORVU7Hr1G095030.2 , HORVU7Hr1G095030.3 , HORVU7Hr1G095030.1 , HORVU7Hr1G095030.4 , HORVU5Hr1G081450.3 , HORVU5Hr1G081450.2 , HORVU5Hr1G081450.1 , HORVU3Hr1G108950.10 , HORVU3Hr1G108950.11 , HORVU3Hr1G108950.4 , HORVU3Hr1G108950.5 , HORVU3Hr1G108950.6 , HORVU3Hr1G108950.7 , HORVU3Hr1G108950.1 , HORVU3Hr1G108950.2 , HORVU3Hr1G108950.3
Wheat TraesCS3D02G497300 , TraesCS3B02G552400 , TraesCS7B02G306300 , TraesCS3A02G491500 , TraesCS7A02G406300 , TraesCS7D02G400000 , TraesCS5B02G319600 , TraesCS5D02G325400 , TraesCS5D02G325400 , TraesCS5A02G319200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G255600 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
2 Sobic.004G273000 MYB family transcription factor, putative, expressed -
3 Sobic.002G392500 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
4 Sobic.008G032800 heavy-metal-associated domain-containing protein, putative, expressed -
5 Sobic.006G076000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@- -
6 Sobic.001G477400 AUXIN SIGNALING F-BOX 2, putative, expressed -
7 Sobic.007G027900 chloroplast unusual positioning protein, putative, expressed -
8 Sobic.010G255000 uncharacterized protein At4g06744 precursor, putative, expressed -
9 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
10 Sobic.006G232900 expressed protein -
11 Sobic.006G171050 - -
12 Sobic.010G220800 zinc-binding protein, putative, expressed -
13 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -
14 Sobic.005G005700 inactive receptor kinase At2g26730 precursor, putative, expressed -
15 Sobic.006G124400 ATP binding protein, putative, expressed -
16 Sobic.007G057900 - -
17 Sobic.001G446400 receptor protein kinase CLAVATA1 precursor, putative, expressed -
18 Sobic.004G198100 expressed protein -
19 Sobic.004G052200 expressed protein -
20 Sobic.006G006400 expressed protein -


Gene co-expression network
sample Sobic010G261700 Sobic010G261700 Sobic002G255600 Sobic002G255600 Sobic010G261700--Sobic002G255600 Sobic004G273000 Sobic004G273000 Sobic010G261700--Sobic004G273000 Sobic002G392500 Sobic002G392500 Sobic010G261700--Sobic002G392500 Sobic008G032800 Sobic008G032800 Sobic010G261700--Sobic008G032800 Sobic006G076000 Sobic006G076000 Sobic010G261700--Sobic006G076000 Sobic001G477400 Sobic001G477400 Sobic010G261700--Sobic001G477400 Sobic007G027900 Sobic007G027900 Sobic010G261700--Sobic007G027900 Sobic010G255000 Sobic010G255000 Sobic010G261700--Sobic010G255000 Sobic001G101700 Sobic001G101700 Sobic010G261700--Sobic001G101700 Sobic010G220800 Sobic010G220800 Sobic002G255600--Sobic010G220800 Sobic002G255600--Sobic010G255000 Sobic002G255600--Sobic006G076000 Sobic001G313800 Sobic001G313800 Sobic002G255600--Sobic001G313800 Sobic002G343600 Sobic002G343600 Sobic002G255600--Sobic002G343600 Sobic006G006400 Sobic006G006400 Sobic002G255600--Sobic006G006400 Sobic002G255600--Sobic010G261700 Sobic004G086500 Sobic004G086500 Sobic002G255600--Sobic004G086500 Sobic009G059800 Sobic009G059800 Sobic002G255600--Sobic009G059800 Sobic006G124400 Sobic006G124400 Sobic004G273000--Sobic006G124400 Sobic004G273000--Sobic001G477400 Sobic004G273000--Sobic002G392500 Sobic004G273000--Sobic007G027900 Sobic010G105400 Sobic010G105400 Sobic004G273000--Sobic010G105400 Sobic002G296000 Sobic002G296000 Sobic004G273000--Sobic002G296000 Sobic001G289900 Sobic001G289900 Sobic004G273000--Sobic001G289900 Sobic004G273000--Sobic010G261700 Sobic005G005700 Sobic005G005700 Sobic004G273000--Sobic005G005700 Sobic002G392500--Sobic004G273000 Sobic002G230800 Sobic002G230800 Sobic002G392500--Sobic002G230800 Sobic002G392500--Sobic006G124400 Sobic002G392500--Sobic010G261700 Sobic007G218100 Sobic007G218100 Sobic002G392500--Sobic007G218100 Sobic002G392500--Sobic007G027900 Sobic004G052200 Sobic004G052200 Sobic002G392500--Sobic004G052200 Sobic010G227200 Sobic010G227200 Sobic002G392500--Sobic010G227200 Sobic010G191000 Sobic010G191000 Sobic002G392500--Sobic010G191000 Sobic008G032800--Sobic007G027900 Sobic009G101100 Sobic009G101100 Sobic008G032800--Sobic009G101100 Sobic008G032800--Sobic001G477400 Sobic008G032800--Sobic006G124400 Sobic008G032800--Sobic002G296000 Sobic010G017400 Sobic010G017400 Sobic008G032800--Sobic010G017400 Sobic008G032800--Sobic005G005700 Sobic009G143200 Sobic009G143200 Sobic008G032800--Sobic009G143200 Sobic008G032800--Sobic004G273000 Sobic004G254300 Sobic004G254300 Sobic006G076000--Sobic004G254300 Sobic006G076000--Sobic002G343600 Sobic007G218400 Sobic007G218400 Sobic006G076000--Sobic007G218400 Sobic001G139850 Sobic001G139850 Sobic006G076000--Sobic001G139850 Sobic009G059866 Sobic009G059866 Sobic006G076000--Sobic009G059866 Sobic009G059932 Sobic009G059932 Sobic006G076000--Sobic009G059932 Sobic006G076000--Sobic004G086500 Sobic006G076000--Sobic009G059800 Sobic006G076000--Sobic010G220800 Sobic001G477400--Sobic005G005700 Sobic001G398400 Sobic001G398400 Sobic001G477400--Sobic001G398400 Sobic008G006800 Sobic008G006800 Sobic001G477400--Sobic008G006800 Sobic001G477400--Sobic006G124400 Sobic004G198100 Sobic004G198100 Sobic001G477400--Sobic004G198100 Sobic010G119300 Sobic010G119300 Sobic001G477400--Sobic010G119300 Sobic001G477400--Sobic004G273000 Sobic004G271300 Sobic004G271300 Sobic001G477400--Sobic004G271300 Sobic003G260700 Sobic003G260700 Sobic001G477400--Sobic003G260700 Sobic007G027900--Sobic002G296000 Sobic007G027900--Sobic005G005700 Sobic007G027900--Sobic004G271300 Sobic007G027900--Sobic009G101100 Sobic002G204400 Sobic002G204400 Sobic007G027900--Sobic002G204400 Sobic007G027900--Sobic006G124400 Sobic007G027900--Sobic008G006800 Sobic007G168900 Sobic007G168900 Sobic007G027900--Sobic007G168900 Sobic007G027900--Sobic001G398400 Sobic007G147200 Sobic007G147200 Sobic010G255000--Sobic007G147200 Sobic010G255000--Sobic001G101700 Sobic007G201900 Sobic007G201900 Sobic010G255000--Sobic007G201900 Sobic003G046400 Sobic003G046400 Sobic010G255000--Sobic003G046400 Sobic010G255000--Sobic002G255600 Sobic007G137101 Sobic007G137101 Sobic010G255000--Sobic007G137101 Sobic001G106500 Sobic001G106500 Sobic010G255000--Sobic001G106500 Sobic007G121200 Sobic007G121200 Sobic010G255000--Sobic007G121200 Sobic010G255000--Sobic010G220800 Sobic006G221800 Sobic006G221800 Sobic001G101700--Sobic006G221800 Sobic001G101700--Sobic010G255000 Sobic004G003700 Sobic004G003700 Sobic001G101700--Sobic004G003700 Sobic001G101700--Sobic007G147200 Sobic001G101700--Sobic007G201900 Sobic007G209200 Sobic007G209200 Sobic001G101700--Sobic007G209200 Sobic008G151600 Sobic008G151600 Sobic001G101700--Sobic008G151600 Sobic009G057800 Sobic009G057800 Sobic001G101700--Sobic009G057800 Sobic001G143400 Sobic001G143400 Sobic001G101700--Sobic001G143400
Octagon: transcription factors


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