Gene annotation
Transcriptome id Sobic.003G404800.3
Synonym
Functional annotation OsFBO21 - F-box and other domain containing protein, expressed
UniProt A0A1W0W157
Pfam PF12937
Panther DB PTHR31790 PTHR31790:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G02030 : F-box family protein
RAP-DB (Rice) LOC_Os09g27660.3 : OsFBO21 - F-box and other domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G092300 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
2 Sobic.003G092400 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
3 Sobic.007G137101 R2R3 MYB transcription factor(PubMedID : 33633216) K09422: transcription factor MYB, plant
4 Sobic.010G183800 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
5 Sobic.010G048600 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
6 Sobic.001G456000 YABBY domain containing protein, putative, expressed -
7 Sobic.001G158100 MBTB43 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
8 Sobic.001G459400 B3 DNA binding domain containing protein, expressed -
9 Sobic.001G106500 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
10 Sobic.002G078900 agenet domain containing protein, expressed -
11 Sobic.007G121200 YDG/SRA domain containing protein, expressed -
12 Sobic.001G459300 - -
13 Sobic.003G046400 transcriptional corepressor LEUNIG, putative, expressed -
14 Sobic.001G071600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
15 Sobic.005G189500 expressed protein -
16 Sobic.005G070700 - -
17 Sobic.003G300000 expressed protein -
18 Sobic.009G063700 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
19 Sobic.001G463301 - -
20 Sobic.009G048300 transcription factor X1, putative, expressed -


Gene co-expression network
sample Sobic003G404800 Sobic003G404800 Sobic003G092300 Sobic003G092300 Sobic003G404800--Sobic003G092300 Sobic003G092400 Sobic003G092400 Sobic003G404800--Sobic003G092400 Sobic007G137101 Sobic007G137101 Sobic003G404800--Sobic007G137101 Sobic010G183800 Sobic010G183800 Sobic003G404800--Sobic010G183800 Sobic010G048600 Sobic010G048600 Sobic003G404800--Sobic010G048600 Sobic001G456000 Sobic001G456000 Sobic003G404800--Sobic001G456000 Sobic001G158100 Sobic001G158100 Sobic003G404800--Sobic001G158100 Sobic001G459400 Sobic001G459400 Sobic003G404800--Sobic001G459400 Sobic001G106500 Sobic001G106500 Sobic003G404800--Sobic001G106500 Sobic003G092300--Sobic001G459400 Sobic003G092300--Sobic010G183800 Sobic001G459300 Sobic001G459300 Sobic003G092300--Sobic001G459300 Sobic003G092300--Sobic001G106500 Sobic003G300000 Sobic003G300000 Sobic003G092300--Sobic003G300000 Sobic003G092300--Sobic010G048600 Sobic009G075500 Sobic009G075500 Sobic003G092300--Sobic009G075500 Sobic003G092300--Sobic001G158100 Sobic005G070700 Sobic005G070700 Sobic003G092300--Sobic005G070700 Sobic007G121200 Sobic007G121200 Sobic003G092400--Sobic007G121200 Sobic003G092400--Sobic001G456000 Sobic004G254300 Sobic004G254300 Sobic003G092400--Sobic004G254300 Sobic002G344201 Sobic002G344201 Sobic003G092400--Sobic002G344201 Sobic009G019550 Sobic009G019550 Sobic003G092400--Sobic009G019550 Sobic002G268300 Sobic002G268300 Sobic003G092400--Sobic002G268300 Sobic003G243100 Sobic003G243100 Sobic003G092400--Sobic003G243100 Sobic010G237400 Sobic010G237400 Sobic003G092400--Sobic010G237400 Sobic003G092400--Sobic001G106500 Sobic007G137101--Sobic007G121200 Sobic007G137101--Sobic001G106500 Sobic007G137101--Sobic001G456000 Sobic007G137101--Sobic010G183800 Sobic010G255000 Sobic010G255000 Sobic007G137101--Sobic010G255000 Sobic007G137101--Sobic010G048600 Sobic007G137101--Sobic001G459300 Sobic007G137101--Sobic003G092300 Sobic007G137101--Sobic001G459400 Sobic010G183800--Sobic003G092300 Sobic010G183800--Sobic001G459400 Sobic002G078900 Sobic002G078900 Sobic010G183800--Sobic002G078900 Sobic010G183800--Sobic003G300000 Sobic010G183800--Sobic001G456000 Sobic009G063700 Sobic009G063700 Sobic010G183800--Sobic009G063700 Sobic001G071600 Sobic001G071600 Sobic010G183800--Sobic001G071600 Sobic010G183800--Sobic001G158100 Sobic010G183800--Sobic001G106500 Sobic010G048600--Sobic001G459300 Sobic010G048600--Sobic005G070700 Sobic010G048600--Sobic001G459400 Sobic010G048600--Sobic001G106500 Sobic001G274300 Sobic001G274300 Sobic010G048600--Sobic001G274300 Sobic010G048600--Sobic001G456000 Sobic010G048600--Sobic003G092300 Sobic010G048600--Sobic002G078900 Sobic010G048600--Sobic010G183800 Sobic001G456000--Sobic002G078900 Sobic001G456000--Sobic010G183800 Sobic001G456000--Sobic001G459300 Sobic001G456000--Sobic010G048600 Sobic001G456000--Sobic001G459400 Sobic001G456000--Sobic001G106500 Sobic001G456000--Sobic005G070700 Sobic001G456000--Sobic003G243100 Sobic004G277700 Sobic004G277700 Sobic001G456000--Sobic004G277700 Sobic001G158100--Sobic009G063700 Sobic009G211300 Sobic009G211300 Sobic001G158100--Sobic009G211300 Sobic001G158100--Sobic001G459400 Sobic004G056000 Sobic004G056000 Sobic001G158100--Sobic004G056000 Sobic001G158100--Sobic003G092300 Sobic001G158100--Sobic010G183800 Sobic001G158100--Sobic009G075500 Sobic007G128200 Sobic007G128200 Sobic001G158100--Sobic007G128200 Sobic001G216400 Sobic001G216400 Sobic001G158100--Sobic001G216400 Sobic001G459400--Sobic003G092300 Sobic001G459400--Sobic001G459300 Sobic001G459400--Sobic005G070700 Sobic001G459400--Sobic010G183800 Sobic001G459400--Sobic010G048600 Sobic001G459400--Sobic009G075500 Sobic001G459400--Sobic002G078900 Sobic001G459400--Sobic009G063700 Sobic006G015100 Sobic006G015100 Sobic001G459400--Sobic006G015100 Sobic001G106500--Sobic001G459300 Sobic001G106500--Sobic010G048600 Sobic001G106500--Sobic003G092300 Sobic001G106500--Sobic001G456000 Sobic001G106500--Sobic005G070700 Sobic003G046400 Sobic003G046400 Sobic001G106500--Sobic003G046400 Sobic001G106500--Sobic002G078900 Sobic001G106500--Sobic001G459400 Sobic001G106500--Sobic010G183800
Octagon: transcription factors


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