Gene annotation
Transcriptome id Sobic.002G205000.2,Sobic.002G205000.1
Synonym Sb02g024980
Functional annotation ZOS9-06 - C2H2 zinc finger protein, expressed
UniProt A0A1B6QCK0
Pfam PF12874
Panther DB PTHR23067 PTHR23067:SF47
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G19380 : RNA recognition motif (RRM)-containing protein
RAP-DB (Rice) LOC_Os09g25420.1 : ZOS9-06 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a047046 , Zm00025a047047
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G243000 OsFBL2 - F-box domain and LRR containing protein, expressed -
2 Sobic.007G033700 OsFBX309 - F-box domain containing protein, expressed -
3 Sobic.002G078900 agenet domain containing protein, expressed -
4 Sobic.004G237000 down-regulated TF in developmental senescence(PubMedID : 27586543)@"PGL2(Ortholog in rice:Heang and Sassa, 2012b(PubMedID : 31659886)@helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.003G091700 seven in absentia protein family protein, expressed -
6 Sobic.003G319900 "domain confirmed by Pfam database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.1 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
7 Sobic.001G137600 ankyrin, putative, expressed -
8 Sobic.003G006000 expressed protein -
9 Sobic.005G131000 expressed protein -
10 Sobic.003G046400 transcriptional corepressor LEUNIG, putative, expressed -
11 Sobic.002G426000 - -
12 Sobic.003G091300 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
13 Sobic.002G258000 homologous to AGL2 and AGL4: expression analysis and mapping data suggest that it is the ortholog of OsMADS24.(PubMedID : 9065695)@OsMADS8 - MADS-box family gene with MIKCc type-box, expressed -
14 Sobic.001G071600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
15 Sobic.010G048500 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
16 Sobic.006G271600 RNA recognition motif containing protein, putative, expressed K13126: polyadenylate-binding protein
17 Sobic.003G238800 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.002G268300 3-ketoacyl-CoA synthase precursor, putative, expressed -
19 Sobic.010G247000 expressed protein -
20 Sobic.007G121200 YDG/SRA domain containing protein, expressed -


Gene co-expression network
sample Sobic002G205000 Sobic002G205000 Sobic009G243000 Sobic009G243000 Sobic002G205000--Sobic009G243000 Sobic007G033700 Sobic007G033700 Sobic002G205000--Sobic007G033700 Sobic002G078900 Sobic002G078900 Sobic002G205000--Sobic002G078900 Sobic004G237000 Sobic004G237000 Sobic002G205000--Sobic004G237000 Sobic003G091700 Sobic003G091700 Sobic002G205000--Sobic003G091700 Sobic003G319900 Sobic003G319900 Sobic002G205000--Sobic003G319900 Sobic001G137600 Sobic001G137600 Sobic002G205000--Sobic001G137600 Sobic003G006000 Sobic003G006000 Sobic002G205000--Sobic003G006000 Sobic005G131000 Sobic005G131000 Sobic002G205000--Sobic005G131000 Sobic009G243000--Sobic007G033700 Sobic009G243000--Sobic002G078900 Sobic006G271600 Sobic006G271600 Sobic009G243000--Sobic006G271600 Sobic001G071600 Sobic001G071600 Sobic009G243000--Sobic001G071600 Sobic009G243000--Sobic002G205000 Sobic009G243000--Sobic003G006000 Sobic003G046400 Sobic003G046400 Sobic009G243000--Sobic003G046400 Sobic009G243000--Sobic001G137600 Sobic002G258000 Sobic002G258000 Sobic009G243000--Sobic002G258000 Sobic007G033700--Sobic003G046400 Sobic007G033700--Sobic009G243000 Sobic007G033700--Sobic001G137600 Sobic001G455900 Sobic001G455900 Sobic007G033700--Sobic001G455900 Sobic006G163300 Sobic006G163300 Sobic007G033700--Sobic006G163300 Sobic010G070900 Sobic010G070900 Sobic007G033700--Sobic010G070900 Sobic007G033700--Sobic006G271600 Sobic007G033700--Sobic001G071600 Sobic007G033700--Sobic004G237000 Sobic001G456000 Sobic001G456000 Sobic002G078900--Sobic001G456000 Sobic010G183800 Sobic010G183800 Sobic002G078900--Sobic010G183800 Sobic001G459400 Sobic001G459400 Sobic002G078900--Sobic001G459400 Sobic003G300000 Sobic003G300000 Sobic002G078900--Sobic003G300000 Sobic001G106500 Sobic001G106500 Sobic002G078900--Sobic001G106500 Sobic002G078900--Sobic001G071600 Sobic001G459300 Sobic001G459300 Sobic002G078900--Sobic001G459300 Sobic003G092300 Sobic003G092300 Sobic002G078900--Sobic003G092300 Sobic002G078900--Sobic009G243000 Sobic003G316601 Sobic003G316601 Sobic004G237000--Sobic003G316601 Sobic003G085900 Sobic003G085900 Sobic004G237000--Sobic003G085900 Sobic004G237000--Sobic007G033700 Sobic004G237000--Sobic003G046400 Sobic004G237000--Sobic010G070900 Sobic002G426000 Sobic002G426000 Sobic004G237000--Sobic002G426000 Sobic007G147200 Sobic007G147200 Sobic004G237000--Sobic007G147200 Sobic004G237000--Sobic009G243000 Sobic004G237000--Sobic001G106500 Sobic003G091700--Sobic005G131000 Sobic010G048500 Sobic010G048500 Sobic003G091700--Sobic010G048500 Sobic002G268300 Sobic002G268300 Sobic003G091700--Sobic002G268300 Sobic004G000800 Sobic004G000800 Sobic003G091700--Sobic004G000800 Sobic006G156200 Sobic006G156200 Sobic003G091700--Sobic006G156200 Sobic003G231000 Sobic003G231000 Sobic003G091700--Sobic003G231000 Sobic003G091700--Sobic002G205000 Sobic002G066350 Sobic002G066350 Sobic003G091700--Sobic002G066350 Sobic003G232800 Sobic003G232800 Sobic003G091700--Sobic003G232800 Sobic005G168400 Sobic005G168400 Sobic003G319900--Sobic005G168400 Sobic010G220800 Sobic010G220800 Sobic003G319900--Sobic010G220800 Sobic003G319900--Sobic002G205000 Sobic010G169200 Sobic010G169200 Sobic003G319900--Sobic010G169200 Sobic003G319900--Sobic004G237000 Sobic003G319900--Sobic002G268300 Sobic003G319900--Sobic003G091700 Sobic001G160100 Sobic001G160100 Sobic003G319900--Sobic001G160100 Sobic003G319900--Sobic002G426000 Sobic001G137600--Sobic007G033700 Sobic001G137600--Sobic006G271600 Sobic001G137600--Sobic009G243000 Sobic001G137600--Sobic003G046400 Sobic001G137600--Sobic001G455900 Sobic003G117200 Sobic003G117200 Sobic001G137600--Sobic003G117200 Sobic001G137600--Sobic006G163300 Sobic001G137600--Sobic001G071600 Sobic010G194600 Sobic010G194600 Sobic001G137600--Sobic010G194600 Sobic002G178700 Sobic002G178700 Sobic003G006000--Sobic002G178700 Sobic001G137500 Sobic001G137500 Sobic003G006000--Sobic001G137500 Sobic001G419500 Sobic001G419500 Sobic003G006000--Sobic001G419500 Sobic003G006000--Sobic006G271600 Sobic003G006000--Sobic002G078900 Sobic003G088600 Sobic003G088600 Sobic003G006000--Sobic003G088600 Sobic003G006000--Sobic009G243000 Sobic003G006000--Sobic002G258000 Sobic001G457600 Sobic001G457600 Sobic003G006000--Sobic001G457600 Sobic005G131000--Sobic010G048500 Sobic005G131000--Sobic006G156200 Sobic005G131000--Sobic003G091700 Sobic005G131000--Sobic002G066350 Sobic005G131000--Sobic003G231000 Sobic007G036200 Sobic007G036200 Sobic005G131000--Sobic007G036200 Sobic004G254300 Sobic004G254300 Sobic005G131000--Sobic004G254300 Sobic002G023500 Sobic002G023500 Sobic005G131000--Sobic002G023500 Sobic010G130900 Sobic010G130900 Sobic005G131000--Sobic010G130900
Octagon: transcription factors


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