Gene annotation
Transcriptome id Sobic.002G426000.1
Synonym Sb02g043650
Functional annotation -
UniProt A0A1W0W819
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G426000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G268300 3-ketoacyl-CoA synthase precursor, putative, expressed -
2 Sobic.004G000800 ZOS7-01 - C2H2 zinc finger protein, expressed -
3 Sobic.010G070900 keratin, type I cytoskeletal 9, putative, expressed -
4 Sobic.010G220800 zinc-binding protein, putative, expressed -
5 Sobic.010G168700 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.007G121200 YDG/SRA domain containing protein, expressed -
7 Sobic.003G046400 transcriptional corepressor LEUNIG, putative, expressed -
8 Sobic.004G237000 down-regulated TF in developmental senescence(PubMedID : 27586543)@"PGL2(Ortholog in rice:Heang and Sassa, 2012b(PubMedID : 31659886)@helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.007G033700 OsFBX309 - F-box domain containing protein, expressed -
10 Sobic.001G313800 B3 DNA binding domain containing protein, expressed -
11 Sobic.003G238800 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.003G092400 expressed protein K04506: E3 ubiquitin-protein ligase SIAH1
13 Sobic.004G254300 fasciclin-like arabinogalactan precursor protein, putative, expressed -
14 Sobic.010G169200 homeobox domain containing protein, expressed -
15 Sobic.007G147200 OsSub56 - Putative Subtilisin homologue, expressed -
16 Sobic.006G076000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@- -
17 Sobic.007G218400 - -
18 Sobic.006G084201 - -
19 Sobic.001G143400 Trihelix Family(PubMedID : 24864043)@transcription factor, putative, expressed -
20 Sobic.007G012500 - -


Gene co-expression network
sample Sobic002G426000 Sobic002G426000 Sobic002G268300 Sobic002G268300 Sobic002G426000--Sobic002G268300 Sobic004G000800 Sobic004G000800 Sobic002G426000--Sobic004G000800 Sobic010G070900 Sobic010G070900 Sobic002G426000--Sobic010G070900 Sobic010G220800 Sobic010G220800 Sobic002G426000--Sobic010G220800 Sobic010G168700 Sobic010G168700 Sobic002G426000--Sobic010G168700 Sobic007G121200 Sobic007G121200 Sobic002G426000--Sobic007G121200 Sobic003G046400 Sobic003G046400 Sobic002G426000--Sobic003G046400 Sobic004G237000 Sobic004G237000 Sobic002G426000--Sobic004G237000 Sobic007G033700 Sobic007G033700 Sobic002G426000--Sobic007G033700 Sobic002G268300--Sobic004G000800 Sobic001G313800 Sobic001G313800 Sobic002G268300--Sobic001G313800 Sobic003G238800 Sobic003G238800 Sobic002G268300--Sobic003G238800 Sobic002G268300--Sobic010G220800 Sobic004G254300 Sobic004G254300 Sobic002G268300--Sobic004G254300 Sobic002G268300--Sobic002G426000 Sobic002G344201 Sobic002G344201 Sobic002G268300--Sobic002G344201 Sobic004G056500 Sobic004G056500 Sobic002G268300--Sobic004G056500 Sobic003G231000 Sobic003G231000 Sobic002G268300--Sobic003G231000 Sobic004G000800--Sobic002G268300 Sobic004G000800--Sobic001G313800 Sobic001G123650 Sobic001G123650 Sobic004G000800--Sobic001G123650 Sobic007G147200 Sobic007G147200 Sobic010G070900--Sobic007G147200 Sobic002G360600 Sobic002G360600 Sobic010G070900--Sobic002G360600 Sobic010G070900--Sobic003G046400 Sobic006G163300 Sobic006G163300 Sobic010G070900--Sobic006G163300 Sobic006G107500 Sobic006G107500 Sobic010G070900--Sobic006G107500 Sobic010G070900--Sobic002G426000 Sobic010G070900--Sobic007G033700 Sobic010G070900--Sobic010G168700 Sobic001G143400 Sobic001G143400 Sobic010G070900--Sobic001G143400 Sobic010G220800--Sobic001G313800 Sobic010G220800--Sobic004G254300 Sobic007G218400 Sobic007G218400 Sobic010G220800--Sobic007G218400 Sobic010G220800--Sobic002G268300 Sobic010G169200 Sobic010G169200 Sobic010G220800--Sobic010G169200 Sobic009G059800 Sobic009G059800 Sobic010G220800--Sobic009G059800 Sobic009G059932 Sobic009G059932 Sobic010G220800--Sobic009G059932 Sobic009G059866 Sobic009G059866 Sobic010G220800--Sobic009G059866 Sobic002G102800 Sobic002G102800 Sobic010G220800--Sobic002G102800 Sobic009G047500 Sobic009G047500 Sobic010G168700--Sobic009G047500 Sobic010G168700--Sobic001G143400 Sobic005G168400 Sobic005G168400 Sobic010G168700--Sobic005G168400 Sobic004G003700 Sobic004G003700 Sobic010G168700--Sobic004G003700 Sobic010G168700--Sobic010G070900 Sobic005G199700 Sobic005G199700 Sobic010G168700--Sobic005G199700 Sobic010G276600 Sobic010G276600 Sobic010G168700--Sobic010G276600 Sobic010G168700--Sobic002G426000 Sobic006G273600 Sobic006G273600 Sobic010G168700--Sobic006G273600 Sobic003G092400 Sobic003G092400 Sobic007G121200--Sobic003G092400 Sobic001G456000 Sobic001G456000 Sobic007G121200--Sobic001G456000 Sobic007G121200--Sobic003G046400 Sobic010G183800 Sobic010G183800 Sobic007G121200--Sobic010G183800 Sobic001G071600 Sobic001G071600 Sobic007G121200--Sobic001G071600 Sobic002G078900 Sobic002G078900 Sobic007G121200--Sobic002G078900 Sobic007G121200--Sobic010G220800 Sobic007G121200--Sobic002G344201 Sobic007G137101 Sobic007G137101 Sobic007G121200--Sobic007G137101 Sobic001G455900 Sobic001G455900 Sobic003G046400--Sobic001G455900 Sobic003G046400--Sobic001G071600 Sobic003G046400--Sobic007G033700 Sobic001G106500 Sobic001G106500 Sobic003G046400--Sobic001G106500 Sobic006G271600 Sobic006G271600 Sobic003G046400--Sobic006G271600 Sobic003G046400--Sobic010G183800 Sobic003G046400--Sobic006G163300 Sobic003G046400--Sobic010G070900 Sobic009G048300 Sobic009G048300 Sobic003G046400--Sobic009G048300 Sobic003G316601 Sobic003G316601 Sobic004G237000--Sobic003G316601 Sobic003G085900 Sobic003G085900 Sobic004G237000--Sobic003G085900 Sobic004G237000--Sobic007G033700 Sobic004G237000--Sobic003G046400 Sobic004G237000--Sobic010G070900 Sobic004G237000--Sobic002G426000 Sobic004G237000--Sobic007G147200 Sobic009G243000 Sobic009G243000 Sobic004G237000--Sobic009G243000 Sobic004G237000--Sobic001G106500 Sobic007G033700--Sobic003G046400 Sobic007G033700--Sobic009G243000 Sobic001G137600 Sobic001G137600 Sobic007G033700--Sobic001G137600 Sobic007G033700--Sobic001G455900 Sobic007G033700--Sobic006G163300 Sobic007G033700--Sobic010G070900 Sobic007G033700--Sobic006G271600 Sobic007G033700--Sobic001G071600 Sobic007G033700--Sobic004G237000
Octagon: transcription factors


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