Gene annotation
Transcriptome id Sobic.001G139300.1
Synonym Sb01g012150
Functional annotation expressed protein
UniProt C6JSJ7 , C5WPP8
Pfam -
Panther DB PTHR36885:SF2 PTHR36885
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g47190.1 : expressed protein
MaizeGDB (Corn) Zm00025a007484 , Zm00025a017124
Brachypodium KQK13806
Barley HORVU4Hr1G003460.1 , HORVU4Hr1G003460.2
Wheat TraesCS4D02G020500 , TraesCS4B02G022900 , TraesCS4A02G291300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G410700 exostosin family domain containing protein, expressed -
2 Sobic.003G223900 extra-large G-protein-related, putative, expressed -
3 Sobic.004G262600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
4 Sobic.009G188800 cyclic nucleotide-gated ion channel 2, putative, expressed K05391: cyclic nucleotide gated channel, plant
5 Sobic.004G218900 alcohol oxidase, putative, expressed K17756: long-chain-alcohol oxidase
6 Sobic.004G234300 DUF581 domain containing protein, expressed -
7 Sobic.001G312600 MLO domain containing protein, putative, expressed K08472: mlo protein
8 Sobic.002G206700 -(PubMedID : 24813726)@CPuORF8 - conserved peptide uORF-containing transcript, expressed K01611: speD, S-adenosylmethionine decarboxylase
9 Sobic.003G390700 glycosyltransferase, putative, expressed -
10 Sobic.004G261200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.003G031500 expressed protein -
12 Sobic.003G143900 kelch motif family protein, putative, expressed -
13 Sobic.009G163700 fasciclin-like arabinogalactan protein, putative, expressed -
14 Sobic.004G303400 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.010G150200 OsFBX209 - F-box domain containing protein, expressed -
16 Sobic.003G389100 formin-like protein 1 precursor, putative, expressed -
17 Sobic.005G034100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@powdery mildew resistant protein 5, putative, expressed -
18 Sobic.007G008300 WD domain, G-beta repeat domain containing protein, expressed K10751: chromatin assembly factor 1 subunit B
19 Sobic.003G289800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
20 Sobic.003G362300 expressed protein -


Gene co-expression network
sample Sobic001G139300 Sobic001G139300 Sobic003G410700 Sobic003G410700 Sobic001G139300--Sobic003G410700 Sobic003G223900 Sobic003G223900 Sobic001G139300--Sobic003G223900 Sobic004G262600 Sobic004G262600 Sobic001G139300--Sobic004G262600 Sobic009G188800 Sobic009G188800 Sobic001G139300--Sobic009G188800 Sobic004G218900 Sobic004G218900 Sobic001G139300--Sobic004G218900 Sobic004G234300 Sobic004G234300 Sobic001G139300--Sobic004G234300 Sobic001G312600 Sobic001G312600 Sobic001G139300--Sobic001G312600 Sobic002G206700 Sobic002G206700 Sobic001G139300--Sobic002G206700 Sobic003G390700 Sobic003G390700 Sobic001G139300--Sobic003G390700 Sobic003G410700--Sobic004G262600 Sobic004G261200 Sobic004G261200 Sobic003G410700--Sobic004G261200 Sobic009G194200 Sobic009G194200 Sobic003G410700--Sobic009G194200 Sobic003G389100 Sobic003G389100 Sobic003G410700--Sobic003G389100 Sobic004G296200 Sobic004G296200 Sobic003G410700--Sobic004G296200 Sobic003G094600 Sobic003G094600 Sobic003G410700--Sobic003G094600 Sobic001G440500 Sobic001G440500 Sobic003G410700--Sobic001G440500 Sobic003G410700--Sobic003G223900 Sobic001G436100 Sobic001G436100 Sobic003G410700--Sobic001G436100 Sobic003G223900--Sobic004G262600 Sobic003G223900--Sobic004G234300 Sobic002G270800 Sobic002G270800 Sobic003G223900--Sobic002G270800 Sobic003G223900--Sobic003G410700 Sobic003G223900--Sobic001G139300 Sobic004G336100 Sobic004G336100 Sobic003G223900--Sobic004G336100 Sobic001G217300 Sobic001G217300 Sobic003G223900--Sobic001G217300 Sobic003G017200 Sobic003G017200 Sobic003G223900--Sobic003G017200 Sobic002G257900 Sobic002G257900 Sobic003G223900--Sobic002G257900 Sobic004G262600--Sobic003G410700 Sobic004G262600--Sobic003G223900 Sobic004G262600--Sobic004G261200 Sobic004G262600--Sobic009G188800 Sobic003G399000 Sobic003G399000 Sobic004G262600--Sobic003G399000 Sobic004G262600--Sobic009G194200 Sobic004G262600--Sobic001G217300 Sobic004G262600--Sobic001G139300 Sobic004G262600--Sobic003G017200 Sobic009G188800--Sobic004G262600 Sobic009G188800--Sobic001G139300 Sobic002G321600 Sobic002G321600 Sobic009G188800--Sobic002G321600 Sobic005G115800 Sobic005G115800 Sobic009G188800--Sobic005G115800 Sobic009G188800--Sobic003G223900 Sobic003G361300 Sobic003G361300 Sobic009G188800--Sobic003G361300 Sobic009G188800--Sobic003G399000 Sobic004G331300 Sobic004G331300 Sobic009G188800--Sobic004G331300 Sobic002G192101 Sobic002G192101 Sobic009G188800--Sobic002G192101 Sobic003G346200 Sobic003G346200 Sobic004G218900--Sobic003G346200 Sobic004G218900--Sobic001G139300 Sobic007G181100 Sobic007G181100 Sobic004G218900--Sobic007G181100 Sobic003G406500 Sobic003G406500 Sobic004G218900--Sobic003G406500 Sobic006G182800 Sobic006G182800 Sobic004G218900--Sobic006G182800 Sobic001G263500 Sobic001G263500 Sobic004G218900--Sobic001G263500 Sobic010G132500 Sobic010G132500 Sobic004G218900--Sobic010G132500 Sobic005G168500 Sobic005G168500 Sobic004G218900--Sobic005G168500 Sobic004G115600 Sobic004G115600 Sobic004G218900--Sobic004G115600 Sobic004G234300--Sobic003G223900 Sobic010G222900 Sobic010G222900 Sobic004G234300--Sobic010G222900 Sobic010G150200 Sobic010G150200 Sobic004G234300--Sobic010G150200 Sobic004G040800 Sobic004G040800 Sobic004G234300--Sobic004G040800 Sobic001G493500 Sobic001G493500 Sobic004G234300--Sobic001G493500 Sobic002G239900 Sobic002G239900 Sobic004G234300--Sobic002G239900 Sobic010G011900 Sobic010G011900 Sobic004G234300--Sobic010G011900 Sobic009G201500 Sobic009G201500 Sobic004G234300--Sobic009G201500 Sobic010G077300 Sobic010G077300 Sobic004G234300--Sobic010G077300 Sobic003G098300 Sobic003G098300 Sobic001G312600--Sobic003G098300 Sobic007G050800 Sobic007G050800 Sobic001G312600--Sobic007G050800 Sobic003G084200 Sobic003G084200 Sobic001G312600--Sobic003G084200 Sobic001G404300 Sobic001G404300 Sobic001G312600--Sobic001G404300 Sobic001G312600--Sobic001G139300 Sobic002G286100 Sobic002G286100 Sobic001G312600--Sobic002G286100 Sobic010G177100 Sobic010G177100 Sobic001G312600--Sobic010G177100 Sobic007G073900 Sobic007G073900 Sobic001G312600--Sobic007G073900 Sobic001G460100 Sobic001G460100 Sobic001G312600--Sobic001G460100 Sobic002G206750 Sobic002G206750 Sobic002G206700--Sobic002G206750 Sobic002G268700 Sobic002G268700 Sobic002G206700--Sobic002G268700 Sobic010G250400 Sobic010G250400 Sobic002G206700--Sobic010G250400 Sobic010G252200 Sobic010G252200 Sobic002G206700--Sobic010G252200 Sobic009G167900 Sobic009G167900 Sobic002G206700--Sobic009G167900 Sobic009G109300 Sobic009G109300 Sobic002G206700--Sobic009G109300 Sobic001G377700 Sobic001G377700 Sobic002G206700--Sobic001G377700 Sobic003G289800 Sobic003G289800 Sobic002G206700--Sobic003G289800 Sobic007G125300 Sobic007G125300 Sobic002G206700--Sobic007G125300 Sobic003G250100 Sobic003G250100 Sobic003G390700--Sobic003G250100 Sobic002G196500 Sobic002G196500 Sobic003G390700--Sobic002G196500 Sobic006G170100 Sobic006G170100 Sobic003G390700--Sobic006G170100 Sobic010G255000 Sobic010G255000 Sobic003G390700--Sobic010G255000 Sobic003G204200 Sobic003G204200 Sobic003G390700--Sobic003G204200 Sobic007G201900 Sobic007G201900 Sobic003G390700--Sobic007G201900 Sobic002G112000 Sobic002G112000 Sobic003G390700--Sobic002G112000 Sobic007G121600 Sobic007G121600 Sobic003G390700--Sobic007G121600 Sobic003G244000 Sobic003G244000 Sobic003G390700--Sobic003G244000
Octagon: transcription factors


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