Gene annotation
| Transcriptome id | Sobic.004G218900.1 |
|---|---|
| Synonym | Sb04g026390 |
| Functional annotation | alcohol oxidase, putative, expressed |
| UniProt | C5XXS4 |
| Pfam | PF05199 PF00732 |
| Panther DB | PTHR10668 PTHR10668:SF81 |
| NCBI CDD | - |
| KEGG Orthology | K17756; long-chain-alcohol oxidase |
| Gene Ontology | GO:0016614; oxidoreductase activity, acting on CH-OH group of donors |
Orthologs (automatic annotation)
| TAIR | AT4G28570 : Long-chain fatty alcohol dehydrogenase family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os02g40840.1 : alcohol oxidase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a006633 , Zm00025a032010 |
| Brachypodium | PNT67535 , KQK00393 , KQJ97074 |
| Barley | HORVU1Hr1G040660.39 , HORVU0Hr1G015950.8 , HORVU0Hr1G015950.2 , HORVU0Hr1G015950.3 , HORVU0Hr1G015950.1 , HORVU0Hr1G015950.7 , HORVU0Hr1G015950.4 , HORVU0Hr1G015950.5 , HORVU1Hr1G040660.19 , HORVU1Hr1G040660.18 , HORVU1Hr1G040660.34 , HORVU1Hr1G040660.37 , HORVU1Hr1G040660.36 , HORVU1Hr1G040660.32 , HORVU1Hr1G040660.38 , HORVU1Hr1G040660.35 , HORVU1Hr1G040660.31 , HORVU1Hr1G040660.33 , HORVU1Hr1G040660.29 , HORVU1Hr1G040660.27 , HORVU1Hr1G040660.30 |
| Wheat | TraesCS6B02G255900 , TraesCS6A02G225800 , TraesCS1D02G150000 , TraesCS6D02G209300 , TraesCS1A02G153000 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G346200 | myosin heavy chain-related, putative, expressed | - |
| 2 | Sobic.001G139300 | expressed protein | - |
| 3 | Sobic.007G181100 | MATE efflux family protein("PubMedID : 26759170,PubMedID : 24597475")@MATE efflux family protein, putative, expressed | K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family |
| 4 | Sobic.003G406500 | antifreeze glycoprotein, putative, expressed | - |
| 5 | Sobic.006G182800 | heat stress transcription factor B-1, putative, expressed | K09419: heat shock transcription factor, other eukaryote |
| 6 | Sobic.001G263500 | glycosyl hydrolases family 17, putative, expressed | - |
| 7 | Sobic.010G132500 | expressed protein | - |
| 8 | Sobic.005G168500 | Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed | K11251: histone H2A |
| 9 | Sobic.004G115600 | HMG1/2, putative, expressed | K09273: upstream-binding transcription factor |
| 10 | Sobic.002G425600 | down-regulated TF in developmental senescence(PubMedID : 27586543)@bZIP transcription factor domain containing protein, expressed | K14432: ABA responsive element binding factor |
| 11 | Sobic.009G254400 | polygalacturonase inhibitor 1 precursor, putative, expressed | - |
| 12 | Sobic.008G163800 | expressed protein | - |
| 13 | Sobic.009G163700 | fasciclin-like arabinogalactan protein, putative, expressed | - |
| 14 | Sobic.003G040100 | PHD-finger domain containing protein, putative, expressed | K11380: NuA3 HAT complex component NTO1 |
| 15 | Sobic.001G331100 | expressed protein | - |
| 16 | Sobic.006G108100 | LTPL81 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 17 | Sobic.003G006500 | WD domain, G-beta repeat domain containing protein, expressed | - |
| 18 | Sobic.007G153300 | ZOS8-07 - C2H2 zinc finger protein, expressed | - |
| 19 | Sobic.009G188800 | cyclic nucleotide-gated ion channel 2, putative, expressed | K05391: cyclic nucleotide gated channel, plant |
| 20 | Sobic.006G108000 | formin, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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