Gene annotation
Transcriptome id Sobic.006G182800.2,Sobic.006G182800.1
Synonym Sb06g025710, AT-HSFB2A, HSFB2A
Functional annotation heat stress transcription factor B-1, putative, expressed
UniProt C5YE30
Pfam PF00447
Panther DB PTHR10015 PTHR10015:SF203
NCBI CDD -
KEGG Orthology K09419; heat shock transcription factor, other eukaryote
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G62020 : heat shock transcription factor B2A
RAP-DB (Rice) LOC_Os04g48030.1 : heat stress transcription factor B-1, putative, expressed
MaizeGDB (Corn) Zm00025a056778 , Zm00025a016308
Brachypodium PNT61680
Barley HORVU3Hr1G069590.1
Wheat TraesCS2A02G401600 , TraesCS2D02G399000 , TraesCS2B02G419600
Populus PNT20011


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cDNA sequences
Sobic.006G182800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G396300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Protein CP12-2 (Os)(PubMedID : 27208977)@calvin cycle protein CP12, putative, expressed -
2 Sobic.004G227400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
3 Sobic.003G373150 - -
4 Sobic.004G283300 AP2 domain containing protein, expressed -
5 Sobic.004G283201 - -
6 Sobic.006G055600 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
7 Sobic.010G076500 - -
8 Sobic.006G005600 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@heat shock protein, putative, expressed K04079: HSP90A, molecular chaperone HtpG
9 Sobic.004G310600 Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -
10 Sobic.006G184800 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@dehydration-responsive element-binding protein, putative, expressed -
11 Sobic.009G000700 Sorghum CYP722B is not involved in the production of 5-deoxystrigol or orobanchol(PubMedID : 34525227)@cytochrome P450, putative, expressed -
12 Sobic.001G125100 pre-mRNA-splicing factor, putative, expressed K12817: PRPF18, pre-mRNA-splicing factor 18
13 Sobic.003G233900 - -
14 Sobic.006G184400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
15 Sobic.009G163900 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
16 Sobic.004G305000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
17 Sobic.002G271100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
18 Sobic.003G078501 - -
19 Sobic.001G092600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
20 Sobic.006G188900 GRAS family transcription factor domain containing protein, expressed -


Gene co-expression network
sample Sobic006G182800 Sobic006G182800 Sobic001G396300 Sobic001G396300 Sobic006G182800--Sobic001G396300 Sobic004G227400 Sobic004G227400 Sobic006G182800--Sobic004G227400 Sobic003G373150 Sobic003G373150 Sobic006G182800--Sobic003G373150 Sobic004G283300 Sobic004G283300 Sobic006G182800--Sobic004G283300 Sobic004G283201 Sobic004G283201 Sobic006G182800--Sobic004G283201 Sobic006G055600 Sobic006G055600 Sobic006G182800--Sobic006G055600 Sobic010G076500 Sobic010G076500 Sobic006G182800--Sobic010G076500 Sobic006G005600 Sobic006G005600 Sobic006G182800--Sobic006G005600 Sobic004G310600 Sobic004G310600 Sobic006G182800--Sobic004G310600 Sobic004G320300 Sobic004G320300 Sobic001G396300--Sobic004G320300 Sobic001G186925 Sobic001G186925 Sobic001G396300--Sobic001G186925 Sobic006G065700 Sobic006G065700 Sobic001G396300--Sobic006G065700 Sobic001G441800 Sobic001G441800 Sobic001G396300--Sobic001G441800 Sobic002G387100 Sobic002G387100 Sobic001G396300--Sobic002G387100 Sobic002G430200 Sobic002G430200 Sobic001G396300--Sobic002G430200 Sobic001G004000 Sobic001G004000 Sobic001G396300--Sobic001G004000 Sobic001G525000 Sobic001G525000 Sobic001G396300--Sobic001G525000 Sobic009G198400 Sobic009G198400 Sobic001G396300--Sobic009G198400 Sobic005G087800 Sobic005G087800 Sobic004G227400--Sobic005G087800 Sobic005G115800 Sobic005G115800 Sobic004G227400--Sobic005G115800 Sobic004G227400--Sobic010G076500 Sobic004G227400--Sobic004G310600 Sobic009G000700 Sobic009G000700 Sobic004G227400--Sobic009G000700 Sobic003G078501 Sobic003G078501 Sobic004G227400--Sobic003G078501 Sobic003G233900 Sobic003G233900 Sobic004G227400--Sobic003G233900 Sobic010G006700 Sobic010G006700 Sobic004G227400--Sobic010G006700 Sobic004G227400--Sobic003G373150 Sobic003G373150--Sobic004G310600 Sobic001G125100 Sobic001G125100 Sobic003G373150--Sobic001G125100 Sobic003G373150--Sobic009G000700 Sobic003G373150--Sobic010G006700 Sobic003G373150--Sobic004G283201 Sobic003G373150--Sobic003G078501 Sobic003G373150--Sobic006G055600 Sobic006G267900 Sobic006G267900 Sobic003G373150--Sobic006G267900 Sobic004G278200 Sobic004G278200 Sobic003G373150--Sobic004G278200 Sobic002G344700 Sobic002G344700 Sobic004G283300--Sobic002G344700 Sobic010G016500 Sobic010G016500 Sobic004G283300--Sobic010G016500 Sobic001G081600 Sobic001G081600 Sobic004G283300--Sobic001G081600 Sobic004G283300--Sobic004G283201 Sobic009G170100 Sobic009G170100 Sobic004G283300--Sobic009G170100 Sobic006G032200 Sobic006G032200 Sobic004G283300--Sobic006G032200 Sobic004G281200 Sobic004G281200 Sobic004G283300--Sobic004G281200 Sobic001G476400 Sobic001G476400 Sobic004G283300--Sobic001G476400 Sobic006G210300 Sobic006G210300 Sobic004G283300--Sobic006G210300 Sobic004G283201--Sobic006G055600 Sobic004G283201--Sobic006G005600 Sobic004G283201--Sobic003G373150 Sobic006G184800 Sobic006G184800 Sobic004G283201--Sobic006G184800 Sobic001G092600 Sobic001G092600 Sobic004G283201--Sobic001G092600 Sobic004G283201--Sobic004G283300 Sobic004G283201--Sobic010G016500 Sobic004G283201--Sobic001G125100 Sobic009G201500 Sobic009G201500 Sobic004G283201--Sobic009G201500 Sobic006G055600--Sobic004G283201 Sobic006G055600--Sobic006G005600 Sobic006G055600--Sobic001G092600 Sobic006G055600--Sobic003G373150 Sobic006G055600--Sobic006G184800 Sobic009G163900 Sobic009G163900 Sobic006G055600--Sobic009G163900 Sobic004G321000 Sobic004G321000 Sobic006G055600--Sobic004G321000 Sobic006G055600--Sobic004G278200 Sobic006G055600--Sobic009G201500 Sobic001G095750 Sobic001G095750 Sobic010G076500--Sobic001G095750 Sobic010G076500--Sobic004G227400 Sobic002G189000 Sobic002G189000 Sobic010G076500--Sobic002G189000 Sobic010G085400 Sobic010G085400 Sobic010G076500--Sobic010G085400 Sobic002G013900 Sobic002G013900 Sobic010G076500--Sobic002G013900 Sobic002G182800 Sobic002G182800 Sobic010G076500--Sobic002G182800 Sobic010G076500--Sobic003G233900 Sobic003G131500 Sobic003G131500 Sobic010G076500--Sobic003G131500 Sobic010G076500--Sobic005G087800 Sobic006G005600--Sobic006G055600 Sobic006G005600--Sobic001G092600 Sobic006G005600--Sobic004G283201 Sobic006G005600--Sobic009G201500 Sobic006G005600--Sobic009G163900 Sobic006G005600--Sobic006G184800 Sobic006G005600--Sobic003G373150 Sobic006G005600--Sobic004G283300 Sobic006G005600--Sobic004G278200 Sobic004G310600--Sobic009G000700 Sobic004G310600--Sobic003G078501 Sobic004G310600--Sobic010G006700 Sobic004G310600--Sobic003G373150 Sobic004G155150 Sobic004G155150 Sobic004G310600--Sobic004G155150 Sobic004G331300 Sobic004G331300 Sobic004G310600--Sobic004G331300 Sobic004G310600--Sobic003G233900 Sobic004G257350 Sobic004G257350 Sobic004G310600--Sobic004G257350 Sobic004G310600--Sobic006G267900
Octagon: transcription factors


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