Gene annotation
Transcriptome id Sobic.010G076500.1
Synonym Sb10g006625
Functional annotation -
UniProt C5Z623
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G095750 - -
2 Sobic.004G227400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
3 Sobic.002G189000 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
4 Sobic.010G085400 down-regulated TF in developmental senescence(PubMedID : 27586543)@OsMADS22 - MADS-box family gene with MIKCc type-box, expressed -
5 Sobic.002G013900 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
6 Sobic.002G182800 expressed protein -
7 Sobic.003G233900 - -
8 Sobic.003G131500 VQ domain containing protein, putative, expressed -
9 Sobic.005G087800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
10 Sobic.004G283300 AP2 domain containing protein, expressed -
11 Sobic.009G128300 CUE domain containing protein, expressed -
12 Sobic.003G423300 RALFL36 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
13 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
14 Sobic.003G040800 WRKY102, expressed -
15 Sobic.003G079800 Ser/Thr protein kinase, putative, expressed -
16 Sobic.002G344700 remorin, putative, expressed -
17 Sobic.002G331450 - -
18 Sobic.001G509400 - -
19 Sobic.002G110200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
20 Sobic.009G216900 down-regulated TF in developmental senescence(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant


Gene co-expression network
sample Sobic010G076500 Sobic010G076500 Sobic001G095750 Sobic001G095750 Sobic010G076500--Sobic001G095750 Sobic004G227400 Sobic004G227400 Sobic010G076500--Sobic004G227400 Sobic002G189000 Sobic002G189000 Sobic010G076500--Sobic002G189000 Sobic010G085400 Sobic010G085400 Sobic010G076500--Sobic010G085400 Sobic002G013900 Sobic002G013900 Sobic010G076500--Sobic002G013900 Sobic002G182800 Sobic002G182800 Sobic010G076500--Sobic002G182800 Sobic003G233900 Sobic003G233900 Sobic010G076500--Sobic003G233900 Sobic003G131500 Sobic003G131500 Sobic010G076500--Sobic003G131500 Sobic005G087800 Sobic005G087800 Sobic010G076500--Sobic005G087800 Sobic001G118900 Sobic001G118900 Sobic001G095750--Sobic001G118900 Sobic001G095750--Sobic003G131500 Sobic001G095750--Sobic002G189000 Sobic001G314300 Sobic001G314300 Sobic001G095750--Sobic001G314300 Sobic002G137800 Sobic002G137800 Sobic001G095750--Sobic002G137800 Sobic006G114200 Sobic006G114200 Sobic001G095750--Sobic006G114200 Sobic003G234800 Sobic003G234800 Sobic001G095750--Sobic003G234800 Sobic001G095750--Sobic005G087800 Sobic001G161200 Sobic001G161200 Sobic001G095750--Sobic001G161200 Sobic004G227400--Sobic005G087800 Sobic005G115800 Sobic005G115800 Sobic004G227400--Sobic005G115800 Sobic004G227400--Sobic010G076500 Sobic004G310600 Sobic004G310600 Sobic004G227400--Sobic004G310600 Sobic009G000700 Sobic009G000700 Sobic004G227400--Sobic009G000700 Sobic003G078501 Sobic003G078501 Sobic004G227400--Sobic003G078501 Sobic004G227400--Sobic003G233900 Sobic010G006700 Sobic010G006700 Sobic004G227400--Sobic010G006700 Sobic003G373150 Sobic003G373150 Sobic004G227400--Sobic003G373150 Sobic002G189000--Sobic002G013900 Sobic002G189000--Sobic003G233900 Sobic002G271100 Sobic002G271100 Sobic002G189000--Sobic002G271100 Sobic010G260300 Sobic010G260300 Sobic002G189000--Sobic010G260300 Sobic009G128300 Sobic009G128300 Sobic002G189000--Sobic009G128300 Sobic002G110200 Sobic002G110200 Sobic002G189000--Sobic002G110200 Sobic003G225900 Sobic003G225900 Sobic002G189000--Sobic003G225900 Sobic004G155150 Sobic004G155150 Sobic002G189000--Sobic004G155150 Sobic004G285100 Sobic004G285100 Sobic002G189000--Sobic004G285100 Sobic010G085400--Sobic002G182800 Sobic002G331450 Sobic002G331450 Sobic010G085400--Sobic002G331450 Sobic010G085400--Sobic009G128300 Sobic003G040800 Sobic003G040800 Sobic010G085400--Sobic003G040800 Sobic010G085400--Sobic002G110200 Sobic010G085400--Sobic002G013900 Sobic004G211301 Sobic004G211301 Sobic010G085400--Sobic004G211301 Sobic010G085400--Sobic003G233900 Sobic007G169600 Sobic007G169600 Sobic010G085400--Sobic007G169600 Sobic002G013900--Sobic003G233900 Sobic002G013900--Sobic009G128300 Sobic002G013900--Sobic002G110200 Sobic002G013900--Sobic002G189000 Sobic002G013900--Sobic002G182800 Sobic002G013900--Sobic002G331450 Sobic003G227600 Sobic003G227600 Sobic002G013900--Sobic003G227600 Sobic002G013900--Sobic010G085400 Sobic002G013900--Sobic003G040800 Sobic002G182800--Sobic009G128300 Sobic001G509400 Sobic001G509400 Sobic002G182800--Sobic001G509400 Sobic002G182800--Sobic003G233900 Sobic001G075101 Sobic001G075101 Sobic002G182800--Sobic001G075101 Sobic002G182800--Sobic002G331450 Sobic002G182800--Sobic003G227600 Sobic002G182800--Sobic003G040800 Sobic002G182800--Sobic010G085400 Sobic002G342100 Sobic002G342100 Sobic002G182800--Sobic002G342100 Sobic003G233900--Sobic009G128300 Sobic003G233900--Sobic003G227600 Sobic003G233900--Sobic002G182800 Sobic003G233900--Sobic003G040800 Sobic003G233900--Sobic009G000700 Sobic009G216900 Sobic009G216900 Sobic003G233900--Sobic009G216900 Sobic004G257350 Sobic004G257350 Sobic003G233900--Sobic004G257350 Sobic003G066900 Sobic003G066900 Sobic003G233900--Sobic003G066900 Sobic003G233900--Sobic004G285100 Sobic001G462800 Sobic001G462800 Sobic003G131500--Sobic001G462800 Sobic010G272101 Sobic010G272101 Sobic003G131500--Sobic010G272101 Sobic003G131500--Sobic001G095750 Sobic010G016500 Sobic010G016500 Sobic003G131500--Sobic010G016500 Sobic001G081600 Sobic001G081600 Sobic003G131500--Sobic001G081600 Sobic003G131500--Sobic002G182800 Sobic006G203000 Sobic006G203000 Sobic003G131500--Sobic006G203000 Sobic003G131500--Sobic009G128300 Sobic004G244300 Sobic004G244300 Sobic003G131500--Sobic004G244300 Sobic005G087800--Sobic003G233900 Sobic005G087800--Sobic004G285100 Sobic005G087800--Sobic002G182800 Sobic005G087800--Sobic002G189000 Sobic004G283300 Sobic004G283300 Sobic005G087800--Sobic004G283300 Sobic005G087800--Sobic004G310600 Sobic005G087800--Sobic003G227600 Sobic005G087800--Sobic009G128300 Sobic005G087800--Sobic009G000700
Octagon: transcription factors


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