Gene annotation
Transcriptome id Sobic.003G346200.1,Sobic.003G346200.10,Sobic.003G346200.6,Sobic.003G346200.9,Sobic.003G346200.5,Sobic.003G346200.4,Sobic.003G346200.7,Sobic.003G346200.8,Sobic.003G346200.3,Sobic.003G346200.2
Synonym RIP3, Sb03g038980
Functional annotation myosin heavy chain-related, putative, expressed
UniProt A0A1B6Q6V5 , A0A1W0W0B3
Pfam -
Panther DB PTHR34224:SF3 PTHR34224 PTHR34224 PTHR34224:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37080 : ROP interactive partner 3
RAP-DB (Rice) LOC_Os01g61760.4,LOC_Os01g61760.1,LOC_Os01g61760.2,LOC_Os01g61760.3 : myosin heavy chain-related, putative, expressed
MaizeGDB (Corn) Zm00025a026982 , Zm00025a028821 , Zm00025a039714
Brachypodium KQK10453 , KQK10452 , KQK10451 , KQK10450 , PNT73141 , PNT73140 , PNT73143 , PNT73142 , KQK10449 , KQK10448 , PNT73138 , PNT73139
Barley HORVU3Hr1G087430.15 , HORVU3Hr1G087430.14 , HORVU3Hr1G087430.16 , HORVU3Hr1G087430.11 , HORVU3Hr1G087430.10 , HORVU3Hr1G087430.13 , HORVU3Hr1G087430.12 , HORVU3Hr1G087430.9 , HORVU3Hr1G087430.8 , HORVU3Hr1G087430.1 , HORVU3Hr1G087430.3 , HORVU3Hr1G087430.2 , HORVU3Hr1G087430.5 , HORVU3Hr1G087430.4 , HORVU3Hr1G087430.7 , HORVU3Hr1G087430.6
Wheat TraesCS3D02G346600 , TraesCS3D02G346600 , TraesCS3A02G352600 , TraesCS3D02G346600 , TraesCS3D02G346600 , TraesCS3A02G352600 , TraesCS3B02G385200 , TraesCS3B02G385200
Populus -


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cDNA sequences
Sobic.003G346200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G300500 Trihelix Family(PubMedID : 24864043)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.004G227000 expressed protein -
3 Sobic.010G161300 receptor-like kinase, putative, expressed -
4 Sobic.002G056300 AT hook-containing DNA-binding protein, putative, expressed K11275: histone H1/5
5 Sobic.006G280300 anthranilate phosphoribosyltransferase, putative, expressed -
6 Sobic.006G278400 ZOS4-14 - C2H2 zinc finger protein, expressed -
7 Sobic.004G236500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
8 Sobic.008G031600 expressed protein -
9 Sobic.008G163800 expressed protein -
10 Sobic.003G127600 ubiquitin-conjugating enzyme, putative, expressed K06688: UBE2C, ubiquitin-conjugating enzyme E2 C
11 Sobic.001G429100 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
12 Sobic.001G180300 expressed protein -
13 Sobic.004G128600 salt stress root protein RS1, putative, expressed -
14 Sobic.009G155500 cytochrome P450, putative, expressed -
15 Sobic.001G148600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
16 Sobic.003G201400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
17 Sobic.005G022600 PME/invertase inhibitor, putative, expressed -
18 Sobic.004G320300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
19 Sobic.004G329100 gibberellin 2-beta-dioxygenase 7, putative, expressed -
20 Sobic.006G187600 DUF623 domain containing protein, expressed -


Gene co-expression network
sample Sobic003G346200 Sobic003G346200 Sobic004G300500 Sobic004G300500 Sobic003G346200--Sobic004G300500 Sobic004G227000 Sobic004G227000 Sobic003G346200--Sobic004G227000 Sobic010G161300 Sobic010G161300 Sobic003G346200--Sobic010G161300 Sobic002G056300 Sobic002G056300 Sobic003G346200--Sobic002G056300 Sobic006G280300 Sobic006G280300 Sobic003G346200--Sobic006G280300 Sobic006G278400 Sobic006G278400 Sobic003G346200--Sobic006G278400 Sobic004G236500 Sobic004G236500 Sobic003G346200--Sobic004G236500 Sobic008G031600 Sobic008G031600 Sobic003G346200--Sobic008G031600 Sobic008G163800 Sobic008G163800 Sobic003G346200--Sobic008G163800 Sobic003G230300 Sobic003G230300 Sobic004G300500--Sobic003G230300 Sobic001G362800 Sobic001G362800 Sobic004G300500--Sobic001G362800 Sobic006G053000 Sobic006G053000 Sobic004G300500--Sobic006G053000 Sobic010G189800 Sobic010G189800 Sobic004G300500--Sobic010G189800 Sobic001G295900 Sobic001G295900 Sobic004G300500--Sobic001G295900 Sobic004G300500--Sobic004G236500 Sobic001G429100 Sobic001G429100 Sobic004G300500--Sobic001G429100 Sobic010G073300 Sobic010G073300 Sobic004G300500--Sobic010G073300 Sobic001G180300 Sobic001G180300 Sobic004G300500--Sobic001G180300 Sobic004G227000--Sobic006G278400 Sobic004G227000--Sobic001G180300 Sobic002G425900 Sobic002G425900 Sobic004G227000--Sobic002G425900 Sobic006G187600 Sobic006G187600 Sobic004G227000--Sobic006G187600 Sobic004G128600 Sobic004G128600 Sobic004G227000--Sobic004G128600 Sobic010G224800 Sobic010G224800 Sobic004G227000--Sobic010G224800 Sobic002G059200 Sobic002G059200 Sobic004G227000--Sobic002G059200 Sobic004G329100 Sobic004G329100 Sobic004G227000--Sobic004G329100 Sobic010G114400 Sobic010G114400 Sobic004G227000--Sobic010G114400 Sobic001G148600 Sobic001G148600 Sobic010G161300--Sobic001G148600 Sobic010G161300--Sobic004G128600 Sobic006G197000 Sobic006G197000 Sobic010G161300--Sobic006G197000 Sobic010G161300--Sobic008G031600 Sobic003G201400 Sobic003G201400 Sobic010G161300--Sobic003G201400 Sobic005G226900 Sobic005G226900 Sobic010G161300--Sobic005G226900 Sobic010G014200 Sobic010G014200 Sobic010G161300--Sobic010G014200 Sobic010G161300--Sobic006G278400 Sobic010G161300--Sobic004G227000 Sobic002G056300--Sobic002G059200 Sobic002G403400 Sobic002G403400 Sobic002G056300--Sobic002G403400 Sobic003G350100 Sobic003G350100 Sobic002G056300--Sobic003G350100 Sobic003G067300 Sobic003G067300 Sobic002G056300--Sobic003G067300 Sobic004G265400 Sobic004G265400 Sobic002G056300--Sobic004G265400 Sobic001G416800 Sobic001G416800 Sobic002G056300--Sobic001G416800 Sobic008G133100 Sobic008G133100 Sobic002G056300--Sobic008G133100 Sobic007G149600 Sobic007G149600 Sobic002G056300--Sobic007G149600 Sobic001G200500 Sobic001G200500 Sobic002G056300--Sobic001G200500 Sobic006G280300--Sobic006G197000 Sobic001G460700 Sobic001G460700 Sobic006G280300--Sobic001G460700 Sobic006G280300--Sobic003G201400 Sobic003G396900 Sobic003G396900 Sobic006G280300--Sobic003G396900 Sobic006G280300--Sobic008G031600 Sobic008G028500 Sobic008G028500 Sobic006G280300--Sobic008G028500 Sobic006G280300--Sobic010G114400 Sobic006G280300--Sobic004G128600 SobicK044200 SobicK044200 Sobic006G280300--SobicK044200 Sobic006G278400--Sobic004G227000 Sobic006G278400--Sobic001G180300 Sobic003G301200 Sobic003G301200 Sobic006G278400--Sobic003G301200 Sobic008G163600 Sobic008G163600 Sobic006G278400--Sobic008G163600 Sobic007G081300 Sobic007G081300 Sobic006G278400--Sobic007G081300 Sobic006G278400--Sobic006G187600 Sobic006G278400--Sobic010G014200 Sobic006G278400--Sobic002G425900 Sobic006G278400--Sobic004G128600 Sobic006G257500 Sobic006G257500 Sobic004G236500--Sobic006G257500 Sobic008G020300 Sobic008G020300 Sobic004G236500--Sobic008G020300 Sobic003G008850 Sobic003G008850 Sobic004G236500--Sobic003G008850 Sobic010G155901 Sobic010G155901 Sobic004G236500--Sobic010G155901 Sobic001G145300 Sobic001G145300 Sobic004G236500--Sobic001G145300 Sobic010G132300 Sobic010G132300 Sobic004G236500--Sobic010G132300 Sobic006G094400 Sobic006G094400 Sobic004G236500--Sobic006G094400 Sobic001G407000 Sobic001G407000 Sobic004G236500--Sobic001G407000 Sobic002G284701 Sobic002G284701 Sobic004G236500--Sobic002G284701 Sobic003G081400 Sobic003G081400 Sobic008G031600--Sobic003G081400 Sobic008G031600--Sobic003G201400 Sobic010G045300 Sobic010G045300 Sobic008G031600--Sobic010G045300 Sobic010G029200 Sobic010G029200 Sobic008G031600--Sobic010G029200 Sobic010G122533 Sobic010G122533 Sobic008G031600--Sobic010G122533 Sobic009G039400 Sobic009G039400 Sobic008G031600--Sobic009G039400 Sobic010G208300 Sobic010G208300 Sobic008G031600--Sobic010G208300 Sobic005G022600 Sobic005G022600 Sobic008G031600--Sobic005G022600 Sobic006G167200 Sobic006G167200 Sobic008G031600--Sobic006G167200 Sobic008G163800--Sobic008G031600 Sobic001G103400 Sobic001G103400 Sobic008G163800--Sobic001G103400 Sobic010G014900 Sobic010G014900 Sobic008G163800--Sobic010G014900 Sobic008G163800--Sobic001G460700 Sobic007G158400 Sobic007G158400 Sobic008G163800--Sobic007G158400 Sobic004G061600 Sobic004G061600 Sobic008G163800--Sobic004G061600 Sobic003G390300 Sobic003G390300 Sobic008G163800--Sobic003G390300 Sobic004G107400 Sobic004G107400 Sobic008G163800--Sobic004G107400 Sobic008G163800--Sobic010G029200
Octagon: transcription factors


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