Gene annotation
Transcriptome id Sobic.007G181100.1
Synonym Sb07g025190
Functional annotation MATE efflux family protein( (PubMedID : 26759170,(PubMedID : 24597475)
MATE efflux family protein, putative, expressed
UniProt C5YH65
Pfam PF01554
Panther DB PTHR11206 PTHR11206:SF144
NCBI CDD KOG1347; Uncharacterized membrane protein, predicted efflux pump
KEGG Orthology K03327; TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
Gene Ontology GO:0016020; membrane GO:0015297antiporter activity GO:0006855drug transmembrane transport


Orthologs (automatic annotation)
TAIR AT5G19700 : MATE efflux family protein
RAP-DB (Rice) LOC_Os08g43250.1 : MATE efflux family protein, putative, expressed
MaizeGDB (Corn) Zm00025a005371 , Zm00025a014386 , Zm00025a047713 , Zm00025a001421
Brachypodium KQJ97526 , KQK17997 , PNT77806 , KQJ91113 , KQK00755 , KQK22742 , KQK22741 , PNT77807
Barley HORVU7Hr1G056760.2 , HORVU7Hr1G056760.1 , HORVU0Hr1G025760.4 , HORVU0Hr1G025760.5 , HORVU0Hr1G025760.2 , HORVU0Hr1G025760.3 , HORVU0Hr1G025760.1 , HORVU6Hr1G065390.1 , HORVU6Hr1G065390.3 , HORVU6Hr1G065390.2 , HORVU6Hr1G065390.5 , HORVU6Hr1G065390.4 , HORVU0Hr1G021690.2 , HORVU0Hr1G021690.1 , HORVU5Hr1G080470.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G108100 LTPL81 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.001G068800 expressed protein -
3 Sobic.001G247700 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
4 Sobic.002G115700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Chalcone and stilbene synthase (At)(PubMedID : 27208977)@chalcone and stilbene synthases, putative, expressed -
5 Sobic.002G260600 BEE 1, putative, expressed -
6 Sobic.003G083500 inactive receptor kinase At2g26730 precursor, putative, expressed -
7 Sobic.002G425600 down-regulated TF in developmental senescence(PubMedID : 27586543)@bZIP transcription factor domain containing protein, expressed K14432: ABA responsive element binding factor
8 Sobic.007G038000 receptor-like protein kinase 5 precursor, putative, expressed -
9 Sobic.001G438400 POEI16 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
10 Sobic.010G215700 A tissue specific expression in primordial inflorescences(PubMedID : 27501690)@OsSPL10 - SBP-box gene family member, expressed -
11 Sobic.007G000600 CRP2 - Cysteine-rich family protein precursor, expressed -
12 Sobic.008G032400 LTPL58 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.004G349150 - -
14 Sobic.006G006900 expressed protein -
15 Sobic.002G427550 - -
16 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
17 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
18 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
19 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -
20 Sobic.001G133200 OsFBX85 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic007G181100 Sobic007G181100 Sobic006G108100 Sobic006G108100 Sobic007G181100--Sobic006G108100 Sobic001G068800 Sobic001G068800 Sobic007G181100--Sobic001G068800 Sobic001G247700 Sobic001G247700 Sobic007G181100--Sobic001G247700 Sobic002G115700 Sobic002G115700 Sobic007G181100--Sobic002G115700 Sobic002G260600 Sobic002G260600 Sobic007G181100--Sobic002G260600 Sobic003G083500 Sobic003G083500 Sobic007G181100--Sobic003G083500 Sobic002G425600 Sobic002G425600 Sobic007G181100--Sobic002G425600 Sobic007G038000 Sobic007G038000 Sobic007G181100--Sobic007G038000 Sobic001G438400 Sobic001G438400 Sobic007G181100--Sobic001G438400 Sobic006G108100--Sobic001G068800 Sobic006G108100--Sobic007G181100 Sobic006G108100--Sobic001G247700 Sobic006G108100--Sobic002G115700 Sobic006G108100--Sobic003G083500 Sobic006G108100--Sobic002G425600 Sobic006G108100--Sobic001G438400 Sobic004G202800 Sobic004G202800 Sobic006G108100--Sobic004G202800 Sobic006G006800 Sobic006G006800 Sobic006G108100--Sobic006G006800 Sobic001G068800--Sobic002G115700 Sobic001G068800--Sobic006G108100 Sobic001G068800--Sobic001G438400 Sobic010G049600 Sobic010G049600 Sobic001G068800--Sobic010G049600 Sobic001G491400 Sobic001G491400 Sobic001G068800--Sobic001G491400 Sobic001G266100 Sobic001G266100 Sobic001G068800--Sobic001G266100 Sobic005G200700 Sobic005G200700 Sobic001G068800--Sobic005G200700 Sobic007G049100 Sobic007G049100 Sobic001G068800--Sobic007G049100 Sobic002G399600 Sobic002G399600 Sobic001G068800--Sobic002G399600 Sobic001G247700--Sobic007G181100 Sobic001G247700--Sobic003G083500 Sobic001G247700--Sobic006G108100 Sobic001G247700--Sobic001G068800 Sobic001G247700--Sobic002G260600 Sobic003G113500 Sobic003G113500 Sobic001G247700--Sobic003G113500 Sobic007G211200 Sobic007G211200 Sobic001G247700--Sobic007G211200 Sobic004G357000 Sobic004G357000 Sobic001G247700--Sobic004G357000 Sobic005G129600 Sobic005G129600 Sobic001G247700--Sobic005G129600 Sobic002G115700--Sobic001G438400 Sobic006G006900 Sobic006G006900 Sobic002G115700--Sobic006G006900 Sobic002G427550 Sobic002G427550 Sobic002G115700--Sobic002G427550 Sobic001G133200 Sobic001G133200 Sobic002G115700--Sobic001G133200 Sobic002G260600--Sobic001G247700 Sobic002G139800 Sobic002G139800 Sobic002G260600--Sobic002G139800 Sobic002G260600--Sobic007G181100 Sobic004G113900 Sobic004G113900 Sobic002G260600--Sobic004G113900 Sobic001G267800 Sobic001G267800 Sobic002G260600--Sobic001G267800 Sobic007G189400 Sobic007G189400 Sobic002G260600--Sobic007G189400 Sobic002G072700 Sobic002G072700 Sobic002G260600--Sobic002G072700 Sobic009G254500 Sobic009G254500 Sobic002G260600--Sobic009G254500 Sobic001G228100 Sobic001G228100 Sobic002G260600--Sobic001G228100 Sobic003G083500--Sobic001G247700 Sobic003G083500--Sobic007G211200 Sobic001G265300 Sobic001G265300 Sobic003G083500--Sobic001G265300 Sobic005G034500 Sobic005G034500 Sobic003G083500--Sobic005G034500 Sobic003G083500--Sobic004G357000 Sobic003G083500--Sobic006G108100 Sobic003G083500--Sobic005G129600 Sobic009G025400 Sobic009G025400 Sobic003G083500--Sobic009G025400 Sobic009G257900 Sobic009G257900 Sobic003G083500--Sobic009G257900 Sobic002G425600--Sobic007G038000 Sobic002G425600--Sobic006G108100 Sobic002G425600--Sobic007G181100 Sobic007G153300 Sobic007G153300 Sobic002G425600--Sobic007G153300 Sobic002G425600--Sobic003G083500 Sobic002G425600--Sobic001G265300 Sobic003G006500 Sobic003G006500 Sobic002G425600--Sobic003G006500 Sobic002G425600--Sobic001G247700 Sobic003G406500 Sobic003G406500 Sobic002G425600--Sobic003G406500 Sobic007G038000--Sobic002G425600 Sobic007G038000--Sobic007G153300 Sobic007G038000--Sobic007G181100 Sobic003G432000 Sobic003G432000 Sobic007G038000--Sobic003G432000 Sobic010G234900 Sobic010G234900 Sobic007G038000--Sobic010G234900 Sobic007G038000--Sobic003G083500 Sobic010G209800 Sobic010G209800 Sobic007G038000--Sobic010G209800 Sobic003G359200 Sobic003G359200 Sobic007G038000--Sobic003G359200 Sobic007G038000--Sobic001G247700 Sobic007G037400 Sobic007G037400 Sobic001G438400--Sobic007G037400 Sobic007G107500 Sobic007G107500 Sobic001G438400--Sobic007G107500 Sobic001G438400--Sobic006G006900 Sobic007G098600 Sobic007G098600 Sobic001G438400--Sobic007G098600 Sobic001G438400--Sobic001G133200
Octagon: transcription factors


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