Gene annotation
Transcriptome id Sobic.002G260600.1
Synonym Sb02g029530
Functional annotation BEE 1, putative, expressed
UniProt C5X5B1
Pfam PF00010
Panther DB PTHR12565 PTHR12565:SF88
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G50915 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os09g33580.2 : BEE 1, putative, expressed
MaizeGDB (Corn) Zm00025a005310 , Zm00025a014327 , Zm00025a047607
Brachypodium KQJ90964 , KQJ90965 , KQJ90960 , KQJ90961 , KQJ90962 , KQJ90963 , KQJ99166 , KQJ99165
Barley HORVU7Hr1G055180.2 , HORVU7Hr1G055180.3 , HORVU7Hr1G055180.1 , HORVU7Hr1G055180.6 , HORVU7Hr1G055180.7 , HORVU7Hr1G055180.4 , HORVU7Hr1G055180.5
Wheat TraesCS7B02G161700 , TraesCS7B02G161700 , TraesCS7B02G161700 , TraesCS7A02G263700 , TraesCS7A02G263700 , TraesCS7D02G264600 , TraesCS7D02G264600 , TraesCS7D02G264600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G247700 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
2 Sobic.002G139800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.007G181100 MATE efflux family protein("PubMedID : 26759170,PubMedID : 24597475")@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
4 Sobic.004G113900 polygalacturonase, putative, expressed -
5 Sobic.001G267800 thaumatin-like protein 1 precursor, putative, expressed -
6 Sobic.007G189400 BEE 1, putative, expressed -
7 Sobic.002G072700 carboxyl-terminal peptidase, putative, expressed -
8 Sobic.009G254500 protein kinase, putative, expressed -
9 Sobic.001G228100 gene responsible for epi-cuticular wax accumulation in sorghum.(PubMedID : 29379518)@GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.003G300200 expressed protein -
11 Sobic.001G438500 POEI1 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
12 Sobic.001G356400 expansin precursor, putative, expressed -
13 Sobic.001G488400 "PGL1(Ortholog in rice:Heang and Sassa, 2012)"(PubMedID : 31659850)@bHLH family protein, putative, expressed -
14 Sobic.004G062100 A tissue specific expression in primordial inflorescences(PubMedID : 27501690)@OsSPL5 - SBP-box gene family member, expressed -
15 Sobic.003G432000 expressed protein -
16 Sobic.006G247700 Highest expression level in primordial inflorescence(PubMedID : 27501690)@-(PubMedID : 23108465)@OsSPL8 - SBP-box gene family member, expressed -
17 Sobic.004G215000 uncharacterized protein At4g06744 precursor, putative, expressed -
18 Sobic.002G011000 expressed protein -
19 Sobic.001G068800 expressed protein -
20 Sobic.008G187400 - -


Gene co-expression network
sample Sobic002G260600 Sobic002G260600 Sobic001G247700 Sobic001G247700 Sobic002G260600--Sobic001G247700 Sobic002G139800 Sobic002G139800 Sobic002G260600--Sobic002G139800 Sobic007G181100 Sobic007G181100 Sobic002G260600--Sobic007G181100 Sobic004G113900 Sobic004G113900 Sobic002G260600--Sobic004G113900 Sobic001G267800 Sobic001G267800 Sobic002G260600--Sobic001G267800 Sobic007G189400 Sobic007G189400 Sobic002G260600--Sobic007G189400 Sobic002G072700 Sobic002G072700 Sobic002G260600--Sobic002G072700 Sobic009G254500 Sobic009G254500 Sobic002G260600--Sobic009G254500 Sobic001G228100 Sobic001G228100 Sobic002G260600--Sobic001G228100 Sobic001G247700--Sobic007G181100 Sobic003G083500 Sobic003G083500 Sobic001G247700--Sobic003G083500 Sobic006G108100 Sobic006G108100 Sobic001G247700--Sobic006G108100 Sobic001G068800 Sobic001G068800 Sobic001G247700--Sobic001G068800 Sobic001G247700--Sobic002G260600 Sobic003G113500 Sobic003G113500 Sobic001G247700--Sobic003G113500 Sobic007G211200 Sobic007G211200 Sobic001G247700--Sobic007G211200 Sobic004G357000 Sobic004G357000 Sobic001G247700--Sobic004G357000 Sobic005G129600 Sobic005G129600 Sobic001G247700--Sobic005G129600 Sobic001G438500 Sobic001G438500 Sobic002G139800--Sobic001G438500 Sobic004G062100 Sobic004G062100 Sobic002G139800--Sobic004G062100 Sobic002G139800--Sobic009G254500 Sobic002G011000 Sobic002G011000 Sobic002G139800--Sobic002G011000 Sobic002G139800--Sobic007G189400 Sobic008G187400 Sobic008G187400 Sobic002G139800--Sobic008G187400 Sobic002G067500 Sobic002G067500 Sobic002G139800--Sobic002G067500 Sobic002G139800--Sobic002G072700 Sobic009G141300 Sobic009G141300 Sobic002G139800--Sobic009G141300 Sobic007G181100--Sobic006G108100 Sobic007G181100--Sobic001G068800 Sobic007G181100--Sobic001G247700 Sobic002G115700 Sobic002G115700 Sobic007G181100--Sobic002G115700 Sobic007G181100--Sobic002G260600 Sobic007G181100--Sobic003G083500 Sobic002G425600 Sobic002G425600 Sobic007G181100--Sobic002G425600 Sobic007G038000 Sobic007G038000 Sobic007G181100--Sobic007G038000 Sobic001G438400 Sobic001G438400 Sobic007G181100--Sobic001G438400 Sobic004G113900--Sobic005G129600 Sobic003G432000 Sobic003G432000 Sobic004G113900--Sobic003G432000 Sobic002G035500 Sobic002G035500 Sobic004G113900--Sobic002G035500 Sobic009G257900 Sobic009G257900 Sobic004G113900--Sobic009G257900 Sobic004G113900--Sobic001G267800 Sobic004G113900--Sobic002G260600 Sobic004G113900--Sobic007G211200 Sobic004G113900--Sobic001G247700 Sobic004G115700 Sobic004G115700 Sobic004G113900--Sobic004G115700 Sobic003G300200 Sobic003G300200 Sobic001G267800--Sobic003G300200 Sobic001G267800--Sobic005G129600 Sobic001G267800--Sobic003G113500 Sobic001G267800--Sobic007G189400 Sobic003G309400 Sobic003G309400 Sobic001G267800--Sobic003G309400 Sobic003G300400 Sobic003G300400 Sobic001G267800--Sobic003G300400 Sobic010G078700 Sobic010G078700 Sobic001G267800--Sobic010G078700 Sobic001G267800--Sobic002G072700 Sobic001G267800--Sobic009G141300 Sobic007G189400--Sobic002G072700 Sobic005G188500 Sobic005G188500 Sobic007G189400--Sobic005G188500 Sobic007G189400--Sobic009G254500 Sobic003G339600 Sobic003G339600 Sobic007G189400--Sobic003G339600 Sobic001G488400 Sobic001G488400 Sobic007G189400--Sobic001G488400 Sobic010G020600 Sobic010G020600 Sobic007G189400--Sobic010G020600 Sobic006G044200 Sobic006G044200 Sobic007G189400--Sobic006G044200 Sobic001G119200 Sobic001G119200 Sobic007G189400--Sobic001G119200 Sobic007G189400--Sobic002G139800 Sobic002G072700--Sobic007G189400 Sobic002G072700--Sobic001G228100 Sobic005G029700 Sobic005G029700 Sobic002G072700--Sobic005G029700 Sobic005G204100 Sobic005G204100 Sobic002G072700--Sobic005G204100 Sobic002G072700--Sobic002G139800 Sobic007G142900 Sobic007G142900 Sobic002G072700--Sobic007G142900 Sobic001G221900 Sobic001G221900 Sobic002G072700--Sobic001G221900 Sobic009G259500 Sobic009G259500 Sobic002G072700--Sobic009G259500 Sobic006G247700 Sobic006G247700 Sobic002G072700--Sobic006G247700 Sobic009G254500--Sobic002G011000 Sobic008G012600 Sobic008G012600 Sobic009G254500--Sobic008G012600 Sobic009G254500--Sobic009G141300 Sobic009G254500--Sobic001G119200 Sobic009G254500--Sobic001G438500 Sobic006G160800 Sobic006G160800 Sobic009G254500--Sobic006G160800 Sobic010G077700 Sobic010G077700 Sobic009G254500--Sobic010G077700 Sobic009G254500--Sobic004G062100 Sobic009G254500--Sobic003G300400 Sobic001G228100--Sobic005G029700 Sobic001G228100--Sobic002G072700 Sobic001G228100--Sobic006G247700 Sobic009G037300 Sobic009G037300 Sobic001G228100--Sobic009G037300 Sobic001G228100--Sobic001G221900 Sobic001G228100--Sobic007G189400 Sobic001G228100--Sobic009G254500 Sobic001G228100--Sobic003G339600 Sobic010G027700 Sobic010G027700 Sobic001G228100--Sobic010G027700
Octagon: transcription factors


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