Gene annotation
Transcriptome id Sobic.004G234300.1
Synonym
Functional annotation DUF581 domain containing protein, expressed
UniProt A0A194YRC3
Pfam PF04570
Panther DB PTHR33059 PTHR33059:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G44670 : Protein of unknown function (DUF581)
RAP-DB (Rice) LOC_Os02g51550.1 : DUF581 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a033177
Brachypodium -
Barley HORVU6Hr1G075130.2 , HORVU6Hr1G075130.3
Wheat TraesCS6B02G331900 , TraesCS6A02G302700 , TraesCS6D02G282200
Populus -


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cDNA sequences
Sobic.004G234300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G223900 extra-large G-protein-related, putative, expressed -
2 Sobic.010G222900 expressed protein -
3 Sobic.010G150200 OsFBX209 - F-box domain containing protein, expressed -
4 Sobic.004G040800 ZOS2-03 - C2H2 zinc finger protein, expressed -
5 Sobic.001G493500 tetratricopeptide repeat domain containing protein, expressed -
6 Sobic.002G239900 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
7 Sobic.010G011900 expressed protein -
8 Sobic.009G201500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@HSP101 Heat shock protein 101("PubMedID : 26759170,PubMedID : 24597475")@heat shock protein 101, putative, expressed K03695: ATP-dependent Clp protease ATP-binding subunit ClpB
9 Sobic.010G077300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@uncharacterized mscS family protein, putative, expressed -
10 Sobic.003G075400 expressed protein K07466: RFA1, RPA1, replication factor A1
11 Sobic.003G144200 Homeobox domain containing protein, expressed -
12 Sobic.003G410700 exostosin family domain containing protein, expressed -
13 Sobic.001G286000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
14 Sobic.003G362300 expressed protein -
15 Sobic.001G106000 homeobox protein knotted-1, putative, expressed -
16 Sobic.004G261200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.002G206700 -(PubMedID : 24813726)@CPuORF8 - conserved peptide uORF-containing transcript, expressed K01611: speD, S-adenosylmethionine decarboxylase
18 Sobic.001G139300 expressed protein -
19 Sobic.010G033300 myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed K10781: fatty acyl-ACP thioesterase B
20 Sobic.005G034100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@powdery mildew resistant protein 5, putative, expressed -


Gene co-expression network
sample Sobic004G234300 Sobic004G234300 Sobic003G223900 Sobic003G223900 Sobic004G234300--Sobic003G223900 Sobic010G222900 Sobic010G222900 Sobic004G234300--Sobic010G222900 Sobic010G150200 Sobic010G150200 Sobic004G234300--Sobic010G150200 Sobic004G040800 Sobic004G040800 Sobic004G234300--Sobic004G040800 Sobic001G493500 Sobic001G493500 Sobic004G234300--Sobic001G493500 Sobic002G239900 Sobic002G239900 Sobic004G234300--Sobic002G239900 Sobic010G011900 Sobic010G011900 Sobic004G234300--Sobic010G011900 Sobic009G201500 Sobic009G201500 Sobic004G234300--Sobic009G201500 Sobic010G077300 Sobic010G077300 Sobic004G234300--Sobic010G077300 Sobic004G262600 Sobic004G262600 Sobic003G223900--Sobic004G262600 Sobic003G223900--Sobic004G234300 Sobic002G270800 Sobic002G270800 Sobic003G223900--Sobic002G270800 Sobic003G410700 Sobic003G410700 Sobic003G223900--Sobic003G410700 Sobic001G139300 Sobic001G139300 Sobic003G223900--Sobic001G139300 Sobic004G336100 Sobic004G336100 Sobic003G223900--Sobic004G336100 Sobic001G217300 Sobic001G217300 Sobic003G223900--Sobic001G217300 Sobic003G017200 Sobic003G017200 Sobic003G223900--Sobic003G017200 Sobic002G257900 Sobic002G257900 Sobic003G223900--Sobic002G257900 Sobic010G222900--Sobic004G040800 Sobic007G050800 Sobic007G050800 Sobic010G222900--Sobic007G050800 Sobic006G262501 Sobic006G262501 Sobic010G222900--Sobic006G262501 Sobic010G222900--Sobic004G234300 Sobic004G222200 Sobic004G222200 Sobic010G222900--Sobic004G222200 Sobic003G369600 Sobic003G369600 Sobic010G222900--Sobic003G369600 Sobic008G118100 Sobic008G118100 Sobic010G222900--Sobic008G118100 Sobic010G175000 Sobic010G175000 Sobic010G222900--Sobic010G175000 Sobic003G075400 Sobic003G075400 Sobic010G222900--Sobic003G075400 Sobic001G286000 Sobic001G286000 Sobic010G150200--Sobic001G286000 Sobic010G150200--Sobic004G234300 Sobic001G106000 Sobic001G106000 Sobic010G150200--Sobic001G106000 Sobic010G033300 Sobic010G033300 Sobic010G150200--Sobic010G033300 Sobic001G450800 Sobic001G450800 Sobic010G150200--Sobic001G450800 Sobic009G156600 Sobic009G156600 Sobic010G150200--Sobic009G156600 Sobic002G267800 Sobic002G267800 Sobic010G150200--Sobic002G267800 Sobic004G285100 Sobic004G285100 Sobic010G150200--Sobic004G285100 Sobic004G261200 Sobic004G261200 Sobic010G150200--Sobic004G261200 Sobic004G040800--Sobic010G222900 Sobic003G435400 Sobic003G435400 Sobic004G040800--Sobic003G435400 Sobic004G040800--Sobic004G234300 Sobic004G040800--Sobic003G369600 Sobic001G496900 Sobic001G496900 Sobic004G040800--Sobic001G496900 Sobic006G199700 Sobic006G199700 Sobic004G040800--Sobic006G199700 Sobic006G017600 Sobic006G017600 Sobic004G040800--Sobic006G017600 Sobic010G252900 Sobic010G252900 Sobic004G040800--Sobic010G252900 Sobic006G096800 Sobic006G096800 Sobic004G040800--Sobic006G096800 Sobic001G493500--Sobic010G011900 Sobic001G493500--Sobic004G234300 Sobic001G493500--Sobic010G077300 Sobic010G170000 Sobic010G170000 Sobic001G493500--Sobic010G170000 Sobic003G224600 Sobic003G224600 Sobic001G493500--Sobic003G224600 Sobic001G493500--Sobic001G286000 Sobic001G493500--Sobic009G201500 Sobic004G066500 Sobic004G066500 Sobic001G493500--Sobic004G066500 Sobic007G045900 Sobic007G045900 Sobic001G493500--Sobic007G045900 Sobic002G239900--Sobic003G017200 Sobic006G200200 Sobic006G200200 Sobic002G239900--Sobic006G200200 Sobic001G155300 Sobic001G155300 Sobic002G239900--Sobic001G155300 Sobic001G157400 Sobic001G157400 Sobic002G239900--Sobic001G157400 Sobic007G153001 Sobic007G153001 Sobic002G239900--Sobic007G153001 Sobic001G241600 Sobic001G241600 Sobic002G239900--Sobic001G241600 Sobic001G160200 Sobic001G160200 Sobic002G239900--Sobic001G160200 Sobic003G378000 Sobic003G378000 Sobic002G239900--Sobic003G378000 Sobic002G239900--Sobic001G106000 Sobic010G011900--Sobic001G155300 Sobic001G424400 Sobic001G424400 Sobic010G011900--Sobic001G424400 Sobic010G011900--Sobic001G493500 Sobic010G011900--Sobic007G045900 Sobic010G011900--Sobic004G234300 Sobic008G088839 Sobic008G088839 Sobic010G011900--Sobic008G088839 Sobic010G011900--Sobic004G066500 Sobic009G161900 Sobic009G161900 Sobic010G011900--Sobic009G161900 Sobic004G058600 Sobic004G058600 Sobic010G011900--Sobic004G058600 Sobic006G005600 Sobic006G005600 Sobic009G201500--Sobic006G005600 Sobic001G092600 Sobic001G092600 Sobic009G201500--Sobic001G092600 Sobic006G055600 Sobic006G055600 Sobic009G201500--Sobic006G055600 Sobic004G283201 Sobic004G283201 Sobic009G201500--Sobic004G283201 Sobic009G201500--Sobic001G286000 Sobic003G373150 Sobic003G373150 Sobic009G201500--Sobic003G373150 Sobic004G321000 Sobic004G321000 Sobic009G201500--Sobic004G321000 Sobic003G233900 Sobic003G233900 Sobic009G201500--Sobic003G233900 Sobic004G283300 Sobic004G283300 Sobic009G201500--Sobic004G283300 Sobic003G427300 Sobic003G427300 Sobic010G077300--Sobic003G427300 Sobic010G077300--Sobic003G075400 Sobic010G077300--Sobic010G170000 Sobic003G098300 Sobic003G098300 Sobic010G077300--Sobic003G098300 Sobic010G077300--Sobic004G066500 Sobic010G077300--Sobic004G058600 Sobic010G077300--Sobic004G234300 Sobic010G077300--Sobic001G493500 Sobic001G508200 Sobic001G508200 Sobic010G077300--Sobic001G508200
Octagon: transcription factors


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