Gene annotation
Transcriptome id Sobic.010G011900.1,Sobic.010G011900.2
Synonym Sb10g001180
Functional annotation expressed protein
UniProt C5Z2T2
Pfam -
Panther DB PTHR35122 PTHR35122:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g02410.1 : expressed protein
MaizeGDB (Corn) Zm00025a041192
Brachypodium PNT76613
Barley HORVU7Hr1G007590.6 , HORVU7Hr1G007590.5 , HORVU7Hr1G007590.2
Wheat TraesCS4A02G445100
Populus -


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cDNA sequences
Sobic.010G011900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G155300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
2 Sobic.001G424400 similar to Putative uncharacterized protein(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Negative regulator of ABA(PubMedID : 30367619)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
3 Sobic.001G493500 tetratricopeptide repeat domain containing protein, expressed -
4 Sobic.007G045900 integral membrane protein DUF6 domain containing protein, expressed -
5 Sobic.004G234300 DUF581 domain containing protein, expressed -
6 Sobic.008G088839 - -
7 Sobic.004G066500 chaperone protein clpB 1, putative, expressed K03695: ATP-dependent Clp protease ATP-binding subunit ClpB
8 Sobic.009G161900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@NDP1, putative, expressed -
9 Sobic.004G058600 aldehyde dehydrogenase, putative, expressed K17761: succinate-semialdehyde dehydrogenase, mitochondrial
10 Sobic.003G369600 CorA-like magnesium transporter protein, putative, expressed -
11 Sobic.010G077300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@uncharacterized mscS family protein, putative, expressed -
12 Sobic.003G378000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@F-box/LRR-repeat protein 2, putative, expressed K03875: SKP2, F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
13 Sobic.010G222900 expressed protein -
14 Sobic.001G241600 MBTB52 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
15 Sobic.001G333900 Diacylglycerol kinase 1 DGK1 (At)(PubMedID : 27208977)@diacylglycerol kinase 1, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
16 Sobic.002G239900 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
17 Sobic.003G075400 expressed protein K07466: RFA1, RPA1, replication factor A1
18 Sobic.010G170000 Triacylglycerol biosynthesis defect 1(PubMedID : 26320239)@O-acyltransferase, putative, expressed K11155: diacylglycerol O-acyltransferase 1
19 Sobic.007G221000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K16285: RING/U-box domain-containing protein
20 Sobic.004G142500 Up-reguralion under drought(PubMedID : 24916767)@late embryogenesis abundant protein D-34, putative, expressed -


Gene co-expression network
sample Sobic010G011900 Sobic010G011900 Sobic001G155300 Sobic001G155300 Sobic010G011900--Sobic001G155300 Sobic001G424400 Sobic001G424400 Sobic010G011900--Sobic001G424400 Sobic001G493500 Sobic001G493500 Sobic010G011900--Sobic001G493500 Sobic007G045900 Sobic007G045900 Sobic010G011900--Sobic007G045900 Sobic004G234300 Sobic004G234300 Sobic010G011900--Sobic004G234300 Sobic008G088839 Sobic008G088839 Sobic010G011900--Sobic008G088839 Sobic004G066500 Sobic004G066500 Sobic010G011900--Sobic004G066500 Sobic009G161900 Sobic009G161900 Sobic010G011900--Sobic009G161900 Sobic004G058600 Sobic004G058600 Sobic010G011900--Sobic004G058600 Sobic007G169600 Sobic007G169600 Sobic001G155300--Sobic007G169600 Sobic002G037400 Sobic002G037400 Sobic001G155300--Sobic002G037400 Sobic002G342100 Sobic002G342100 Sobic001G155300--Sobic002G342100 Sobic007G143100 Sobic007G143100 Sobic001G155300--Sobic007G143100 Sobic001G075101 Sobic001G075101 Sobic001G155300--Sobic001G075101 Sobic003G083000 Sobic003G083000 Sobic001G155300--Sobic003G083000 Sobic006G203000 Sobic006G203000 Sobic001G155300--Sobic006G203000 Sobic005G016900 Sobic005G016900 Sobic001G155300--Sobic005G016900 Sobic009G076700 Sobic009G076700 Sobic001G155300--Sobic009G076700 Sobic004G116300 Sobic004G116300 Sobic001G424400--Sobic004G116300 Sobic001G424400--Sobic010G011900 Sobic001G424400--Sobic009G161900 Sobic010G147600 Sobic010G147600 Sobic001G424400--Sobic010G147600 Sobic003G281800 Sobic003G281800 Sobic001G424400--Sobic003G281800 Sobic001G424400--Sobic001G155300 Sobic003G378000 Sobic003G378000 Sobic001G424400--Sobic003G378000 Sobic001G241600 Sobic001G241600 Sobic001G424400--Sobic001G241600 Sobic003G354000 Sobic003G354000 Sobic001G424400--Sobic003G354000 Sobic001G493500--Sobic010G011900 Sobic001G493500--Sobic004G234300 Sobic010G077300 Sobic010G077300 Sobic001G493500--Sobic010G077300 Sobic010G170000 Sobic010G170000 Sobic001G493500--Sobic010G170000 Sobic003G224600 Sobic003G224600 Sobic001G493500--Sobic003G224600 Sobic001G286000 Sobic001G286000 Sobic001G493500--Sobic001G286000 Sobic009G201500 Sobic009G201500 Sobic001G493500--Sobic009G201500 Sobic001G493500--Sobic004G066500 Sobic001G493500--Sobic007G045900 Sobic007G045900--Sobic004G066500 Sobic003G399500 Sobic003G399500 Sobic007G045900--Sobic003G399500 Sobic004G281700 Sobic004G281700 Sobic007G045900--Sobic004G281700 Sobic001G418500 Sobic001G418500 Sobic007G045900--Sobic001G418500 Sobic003G236200 Sobic003G236200 Sobic007G045900--Sobic003G236200 Sobic010G142900 Sobic010G142900 Sobic007G045900--Sobic010G142900 Sobic003G295600 Sobic003G295600 Sobic007G045900--Sobic003G295600 Sobic004G301800 Sobic004G301800 Sobic007G045900--Sobic004G301800 Sobic007G168100 Sobic007G168100 Sobic007G045900--Sobic007G168100 Sobic003G223900 Sobic003G223900 Sobic004G234300--Sobic003G223900 Sobic010G222900 Sobic010G222900 Sobic004G234300--Sobic010G222900 Sobic010G150200 Sobic010G150200 Sobic004G234300--Sobic010G150200 Sobic004G040800 Sobic004G040800 Sobic004G234300--Sobic004G040800 Sobic004G234300--Sobic001G493500 Sobic002G239900 Sobic002G239900 Sobic004G234300--Sobic002G239900 Sobic004G234300--Sobic010G011900 Sobic004G234300--Sobic009G201500 Sobic004G234300--Sobic010G077300 Sobic008G088839--Sobic010G011900 Sobic008G039401 Sobic008G039401 Sobic008G088839--Sobic008G039401 Sobic008G088839--Sobic009G161900 Sobic005G075800 Sobic005G075800 Sobic008G088839--Sobic005G075800 Sobic001G034500 Sobic001G034500 Sobic008G088839--Sobic001G034500 Sobic002G290100 Sobic002G290100 Sobic008G088839--Sobic002G290100 Sobic003G435400 Sobic003G435400 Sobic008G088839--Sobic003G435400 Sobic008G088839--Sobic001G241600 Sobic001G496900 Sobic001G496900 Sobic008G088839--Sobic001G496900 Sobic008G191850 Sobic008G191850 Sobic004G066500--Sobic008G191850 Sobic007G053100 Sobic007G053100 Sobic004G066500--Sobic007G053100 Sobic004G033200 Sobic004G033200 Sobic004G066500--Sobic004G033200 Sobic003G427300 Sobic003G427300 Sobic004G066500--Sobic003G427300 Sobic010G024600 Sobic010G024600 Sobic004G066500--Sobic010G024600 Sobic003G098300 Sobic003G098300 Sobic004G066500--Sobic003G098300 Sobic002G266300 Sobic002G266300 Sobic004G066500--Sobic002G266300 Sobic001G044300 Sobic001G044300 Sobic004G066500--Sobic001G044300 Sobic001G508200 Sobic001G508200 Sobic004G066500--Sobic001G508200 Sobic009G161900--Sobic010G147600 Sobic009G161900--Sobic004G058600 Sobic001G471000 Sobic001G471000 Sobic009G161900--Sobic001G471000 Sobic001G333900 Sobic001G333900 Sobic009G161900--Sobic001G333900 Sobic001G193500 Sobic001G193500 Sobic009G161900--Sobic001G193500 Sobic009G161900--Sobic004G066500 Sobic009G161900--Sobic001G424400 Sobic009G161900--Sobic003G378000 Sobic009G161900--Sobic010G170000 Sobic003G011000 Sobic003G011000 Sobic004G058600--Sobic003G011000 Sobic004G058600--Sobic010G024600 Sobic004G058600--Sobic001G508200 Sobic004G058600--Sobic004G066500 Sobic004G058600--Sobic004G033200 Sobic006G034300 Sobic006G034300 Sobic004G058600--Sobic006G034300 Sobic004G058600--Sobic003G427300 Sobic004G058600--Sobic009G161900 Sobic001G460100 Sobic001G460100 Sobic004G058600--Sobic001G460100
Octagon: transcription factors


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