Gene annotation
Transcriptome id Sobic.004G066500.1
Synonym CLPB4, HSP98.7, CLPB-M, Sb04g005570
Functional annotation chaperone protein clpB 1, putative, expressed
UniProt C5XWW4
Pfam PF07728 PF10431 PF00004 PF02861
Panther DB PTHR11638 PTHR11638:SF86
NCBI CDD -
KEGG Orthology K03695; ATP-dependent Clp protease ATP-binding subunit ClpB
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT2G25140 : casein lytic proteinase B4
RAP-DB (Rice) LOC_Os02g08490.1 : chaperone protein clpB 1, putative, expressed
MaizeGDB (Corn) Zm00025a019246
Brachypodium KQJ93680 , KQJ93681
Barley HORVU6Hr1G028690.9 , HORVU6Hr1G028690.8 , HORVU6Hr1G028690.7 , HORVU6Hr1G028690.6 , HORVU6Hr1G028690.5 , HORVU6Hr1G028690.4 , HORVU6Hr1G028690.3 , HORVU6Hr1G028690.2 , HORVU6Hr1G028690.1
Wheat TraesCS6D02G135600 , TraesCS6B02G174500 , TraesCS6A02G146400
Populus -


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cDNA sequences
Sobic.004G066500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G191850 - -
2 Sobic.007G053100 amino acid permease family protein, putative, expressed -
3 Sobic.004G033200 expressed protein -
4 Sobic.003G427300 uridine 5-monophosphate synthase, putative, expressed K13421: uridine monophosphate synthetase
5 Sobic.010G024600 aminomethyltransferase, putative, expressed K06980: tRNA-modifying protein YgfZ
6 Sobic.003G098300 hydroxyproline-rich glycoprotein family protein, putative, expressed -
7 Sobic.002G266300 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed -
8 Sobic.001G044300 transcription factor, putative, expressed K09060: plant G-box-binding factor
9 Sobic.001G508200 multidrug resistance-associated protein, putative, expressed -
10 Sobic.002G010000 NLI interacting factor-like phosphatase, putative, expressed -
11 Sobic.007G168100 peptidyl-prolyl cis-trans isomerase, putative, expressed -
12 Sobic.004G347500 2-phosphoglycerate kinase-related, putative, expressed -
13 Sobic.002G177600 expressed protein -
14 Sobic.009G052600 universal stress protein domain containing protein, putative, expressed -
15 Sobic.005G134700 chalcone and stilbene synthases, putative, expressed -
16 Sobic.010G170000 Triacylglycerol biosynthesis defect 1(PubMedID : 26320239)@O-acyltransferase, putative, expressed K11155: diacylglycerol O-acyltransferase 1
17 Sobic.005G021000 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
18 Sobic.002G405700 expressed protein -
19 Sobic.004G058600 aldehyde dehydrogenase, putative, expressed K17761: succinate-semialdehyde dehydrogenase, mitochondrial
20 Sobic.006G053200 - -


Gene co-expression network
sample Sobic004G066500 Sobic004G066500 Sobic008G191850 Sobic008G191850 Sobic004G066500--Sobic008G191850 Sobic007G053100 Sobic007G053100 Sobic004G066500--Sobic007G053100 Sobic004G033200 Sobic004G033200 Sobic004G066500--Sobic004G033200 Sobic003G427300 Sobic003G427300 Sobic004G066500--Sobic003G427300 Sobic010G024600 Sobic010G024600 Sobic004G066500--Sobic010G024600 Sobic003G098300 Sobic003G098300 Sobic004G066500--Sobic003G098300 Sobic002G266300 Sobic002G266300 Sobic004G066500--Sobic002G266300 Sobic001G044300 Sobic001G044300 Sobic004G066500--Sobic001G044300 Sobic001G508200 Sobic001G508200 Sobic004G066500--Sobic001G508200 Sobic008G191850--Sobic002G266300 Sobic008G191850--Sobic004G066500 Sobic005G021000 Sobic005G021000 Sobic008G191850--Sobic005G021000 Sobic001G534200 Sobic001G534200 Sobic008G191850--Sobic001G534200 Sobic002G010000 Sobic002G010000 Sobic008G191850--Sobic002G010000 Sobic006G217800 Sobic006G217800 Sobic008G191850--Sobic006G217800 Sobic001G336200 Sobic001G336200 Sobic008G191850--Sobic001G336200 Sobic004G347500 Sobic004G347500 Sobic008G191850--Sobic004G347500 Sobic008G191850--Sobic007G053100 Sobic007G053100--Sobic002G266300 Sobic006G251500 Sobic006G251500 Sobic007G053100--Sobic006G251500 Sobic006G053200 Sobic006G053200 Sobic007G053100--Sobic006G053200 Sobic001G125400 Sobic001G125400 Sobic007G053100--Sobic001G125400 Sobic005G045700 Sobic005G045700 Sobic007G053100--Sobic005G045700 Sobic007G053100--Sobic004G033200 Sobic007G053100--Sobic003G427300 Sobic007G053100--Sobic004G066500 Sobic002G127900 Sobic002G127900 Sobic007G053100--Sobic002G127900 Sobic004G033200--Sobic002G266300 Sobic004G033200--Sobic007G053100 Sobic004G033200--Sobic008G191850 Sobic004G033200--Sobic010G024600 Sobic004G033200--Sobic004G066500 Sobic004G033200--Sobic001G508200 Sobic009G052600 Sobic009G052600 Sobic004G033200--Sobic009G052600 Sobic008G116600 Sobic008G116600 Sobic004G033200--Sobic008G116600 Sobic004G033200--Sobic004G347500 Sobic006G208000 Sobic006G208000 Sobic003G427300--Sobic006G208000 Sobic003G427300--Sobic001G508200 Sobic003G427300--Sobic002G266300 Sobic009G025500 Sobic009G025500 Sobic003G427300--Sobic009G025500 Sobic003G427300--Sobic001G044300 Sobic002G405700 Sobic002G405700 Sobic003G427300--Sobic002G405700 Sobic005G134700 Sobic005G134700 Sobic003G427300--Sobic005G134700 Sobic003G427300--Sobic003G098300 Sobic010G198900 Sobic010G198900 Sobic003G427300--Sobic010G198900 Sobic010G024600--Sobic002G266300 Sobic010G024600--Sobic006G208000 Sobic010G024600--Sobic001G508200 Sobic010G024600--Sobic005G021000 Sobic010G024600--Sobic004G347500 Sobic001G004600 Sobic001G004600 Sobic010G024600--Sobic001G004600 Sobic004G291200 Sobic004G291200 Sobic010G024600--Sobic004G291200 Sobic010G024600--Sobic009G025500 Sobic010G024600--Sobic001G044300 Sobic003G098300--Sobic004G347500 Sobic003G098300--Sobic005G021000 Sobic003G098300--Sobic006G208000 Sobic003G098300--Sobic001G336200 Sobic003G419500 Sobic003G419500 Sobic003G098300--Sobic003G419500 Sobic002G232900 Sobic002G232900 Sobic003G098300--Sobic002G232900 Sobic003G098300--Sobic001G508200 Sobic003G098300--Sobic009G025500 Sobic002G240000 Sobic002G240000 Sobic003G098300--Sobic002G240000 Sobic002G266300--Sobic006G217800 Sobic002G266300--Sobic005G021000 Sobic002G266300--Sobic001G534200 Sobic001G254800 Sobic001G254800 Sobic002G266300--Sobic001G254800 Sobic002G266300--Sobic001G125400 Sobic002G266300--Sobic009G025500 Sobic002G266300--Sobic007G053100 Sobic003G398200 Sobic003G398200 Sobic002G266300--Sobic003G398200 Sobic002G266300--Sobic006G208000 Sobic009G037100 Sobic009G037100 Sobic001G044300--Sobic009G037100 Sobic001G044300--Sobic009G025500 Sobic005G165700 Sobic005G165700 Sobic001G044300--Sobic005G165700 Sobic004G164800 Sobic004G164800 Sobic001G044300--Sobic004G164800 Sobic001G044300--Sobic010G198900 Sobic003G372600 Sobic003G372600 Sobic001G044300--Sobic003G372600 Sobic003G144500 Sobic003G144500 Sobic001G044300--Sobic003G144500 Sobic001G498900 Sobic001G498900 Sobic001G044300--Sobic001G498900 Sobic010G125000 Sobic010G125000 Sobic001G044300--Sobic010G125000 Sobic006G013300 Sobic006G013300 Sobic001G508200--Sobic006G013300 Sobic001G508200--Sobic004G347500 Sobic009G208600 Sobic009G208600 Sobic001G508200--Sobic009G208600 Sobic001G508200--Sobic005G021000 Sobic001G508200--Sobic006G208000 Sobic001G508200--Sobic002G266300 Sobic001G508200--Sobic010G024600 Sobic001G508200--Sobic003G098300 Sobic001G508200--Sobic003G427300
Octagon: transcription factors


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