Gene annotation
Transcriptome id Sobic.004G058600.2,Sobic.004G058600.1,Sobic.004G058600.4,Sobic.004G058600.5,Sobic.004G058600.3
Synonym Sb04g004920, ALDH5F1, SSADH, SSADH1
Functional annotation aldehyde dehydrogenase, putative, expressed
UniProt A0A194YN18 , A0A194YMY4 , A0A194YP12 , H0I4D5 , A0A194YMX1
Pfam PF00171
Panther DB PTHR11699 PTHR11699:SF49
NCBI CDD -
KEGG Orthology K17761; succinate-semialdehyde dehydrogenase, mitochondrial
Gene Ontology GO:0016491; oxidoreductase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G79440 : aldehyde dehydrogenase 5F1
RAP-DB (Rice) LOC_Os02g07760.1 : aldehyde dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a019111 , Zm00025a034780
Brachypodium KQJ93575
Barley HORVU6Hr1G031480.1 , HORVU6Hr1G031480.2 , HORVU6Hr1G031480.3 , HORVU6Hr1G031480.4 , HORVU6Hr1G031480.5 , HORVU6Hr1G031480.6 , HORVU6Hr1G031480.7 , HORVU6Hr1G031480.8 , HORVU6Hr1G031480.9 , HORVU6Hr1G031480.18 , HORVU6Hr1G031480.12 , HORVU6Hr1G031480.13 , HORVU6Hr1G031480.10 , HORVU6Hr1G031480.16 , HORVU6Hr1G031480.17 , HORVU6Hr1G031480.14 , HORVU6Hr1G031480.15
Wheat TraesCS6D02G145400 , TraesCS6D02G145400 , TraesCS6D02G145400 , TraesCS6D02G145400 , TraesCS6B02G183600 , TraesCS6B02G183600 , TraesCS6B02G183600 , TraesCS6A02G155500 , TraesCS6A02G155500 , TraesCS6A02G155500 , TraesCS6A02G155500
Populus -


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cDNA sequences
Sobic.004G058600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G011000 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@AAA-type ATPase family protein, putative, expressed -
2 Sobic.010G024600 aminomethyltransferase, putative, expressed K06980: tRNA-modifying protein YgfZ
3 Sobic.001G508200 multidrug resistance-associated protein, putative, expressed -
4 Sobic.004G066500 chaperone protein clpB 1, putative, expressed K03695: ATP-dependent Clp protease ATP-binding subunit ClpB
5 Sobic.004G033200 expressed protein -
6 Sobic.006G034300 Transketolase(PubMedID : 26186930)@"Transketolase, putative (Os)"(PubMedID : 27208977)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
7 Sobic.003G427300 uridine 5-monophosphate synthase, putative, expressed K13421: uridine monophosphate synthetase
8 Sobic.009G161900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@NDP1, putative, expressed -
9 Sobic.001G460100 heparanase-like protein precursor, putative, expressed K07964: heparanase
10 Sobic.002G266300 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed -
11 Sobic.007G053100 amino acid permease family protein, putative, expressed -
12 Sobic.005G165800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@SEY1, putative, expressed -
13 Sobic.001G044300 transcription factor, putative, expressed K09060: plant G-box-binding factor
14 Sobic.003G098300 hydroxyproline-rich glycoprotein family protein, putative, expressed -
15 Sobic.008G116600 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative, expressed -
16 Sobic.001G396900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
17 Sobic.004G114600 expressed protein -
18 Sobic.010G170000 Triacylglycerol biosynthesis defect 1(PubMedID : 26320239)@O-acyltransferase, putative, expressed K11155: diacylglycerol O-acyltransferase 1
19 Sobic.010G077300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@uncharacterized mscS family protein, putative, expressed -
20 Sobic.009G052600 universal stress protein domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G058600 Sobic004G058600 Sobic003G011000 Sobic003G011000 Sobic004G058600--Sobic003G011000 Sobic010G024600 Sobic010G024600 Sobic004G058600--Sobic010G024600 Sobic001G508200 Sobic001G508200 Sobic004G058600--Sobic001G508200 Sobic004G066500 Sobic004G066500 Sobic004G058600--Sobic004G066500 Sobic004G033200 Sobic004G033200 Sobic004G058600--Sobic004G033200 Sobic006G034300 Sobic006G034300 Sobic004G058600--Sobic006G034300 Sobic003G427300 Sobic003G427300 Sobic004G058600--Sobic003G427300 Sobic009G161900 Sobic009G161900 Sobic004G058600--Sobic009G161900 Sobic001G460100 Sobic001G460100 Sobic004G058600--Sobic001G460100 Sobic003G011000--Sobic006G034300 Sobic009G171400 Sobic009G171400 Sobic003G011000--Sobic009G171400 Sobic004G114600 Sobic004G114600 Sobic003G011000--Sobic004G114600 Sobic005G138500 Sobic005G138500 Sobic003G011000--Sobic005G138500 Sobic001G396900 Sobic001G396900 Sobic003G011000--Sobic001G396900 Sobic005G165800 Sobic005G165800 Sobic003G011000--Sobic005G165800 Sobic003G011000--Sobic004G058600 Sobic003G292400 Sobic003G292400 Sobic003G011000--Sobic003G292400 Sobic010G101300 Sobic010G101300 Sobic003G011000--Sobic010G101300 Sobic002G266300 Sobic002G266300 Sobic010G024600--Sobic002G266300 Sobic006G208000 Sobic006G208000 Sobic010G024600--Sobic006G208000 Sobic010G024600--Sobic001G508200 Sobic005G021000 Sobic005G021000 Sobic010G024600--Sobic005G021000 Sobic004G347500 Sobic004G347500 Sobic010G024600--Sobic004G347500 Sobic001G004600 Sobic001G004600 Sobic010G024600--Sobic001G004600 Sobic004G291200 Sobic004G291200 Sobic010G024600--Sobic004G291200 Sobic009G025500 Sobic009G025500 Sobic010G024600--Sobic009G025500 Sobic001G044300 Sobic001G044300 Sobic010G024600--Sobic001G044300 Sobic006G013300 Sobic006G013300 Sobic001G508200--Sobic006G013300 Sobic001G508200--Sobic004G347500 Sobic009G208600 Sobic009G208600 Sobic001G508200--Sobic009G208600 Sobic001G508200--Sobic005G021000 Sobic001G508200--Sobic006G208000 Sobic001G508200--Sobic002G266300 Sobic001G508200--Sobic010G024600 Sobic003G098300 Sobic003G098300 Sobic001G508200--Sobic003G098300 Sobic001G508200--Sobic003G427300 Sobic008G191850 Sobic008G191850 Sobic004G066500--Sobic008G191850 Sobic007G053100 Sobic007G053100 Sobic004G066500--Sobic007G053100 Sobic004G066500--Sobic004G033200 Sobic004G066500--Sobic003G427300 Sobic004G066500--Sobic010G024600 Sobic004G066500--Sobic003G098300 Sobic004G066500--Sobic002G266300 Sobic004G066500--Sobic001G044300 Sobic004G066500--Sobic001G508200 Sobic004G033200--Sobic002G266300 Sobic004G033200--Sobic007G053100 Sobic004G033200--Sobic008G191850 Sobic004G033200--Sobic010G024600 Sobic004G033200--Sobic004G066500 Sobic004G033200--Sobic001G508200 Sobic009G052600 Sobic009G052600 Sobic004G033200--Sobic009G052600 Sobic008G116600 Sobic008G116600 Sobic004G033200--Sobic008G116600 Sobic004G033200--Sobic004G347500 Sobic006G034300--Sobic003G011000 Sobic006G034300--Sobic001G396900 Sobic006G034300--Sobic004G114600 Sobic006G034300--Sobic005G165800 Sobic006G034300--Sobic009G171400 Sobic006G034300--Sobic005G138500 Sobic002G413200 Sobic002G413200 Sobic006G034300--Sobic002G413200 Sobic006G050600 Sobic006G050600 Sobic006G034300--Sobic006G050600 Sobic006G034300--Sobic006G208000 Sobic003G427300--Sobic006G208000 Sobic003G427300--Sobic001G508200 Sobic003G427300--Sobic002G266300 Sobic003G427300--Sobic009G025500 Sobic003G427300--Sobic001G044300 Sobic002G405700 Sobic002G405700 Sobic003G427300--Sobic002G405700 Sobic005G134700 Sobic005G134700 Sobic003G427300--Sobic005G134700 Sobic003G427300--Sobic003G098300 Sobic010G198900 Sobic010G198900 Sobic003G427300--Sobic010G198900 Sobic010G147600 Sobic010G147600 Sobic009G161900--Sobic010G147600 Sobic009G161900--Sobic004G058600 Sobic001G471000 Sobic001G471000 Sobic009G161900--Sobic001G471000 Sobic001G333900 Sobic001G333900 Sobic009G161900--Sobic001G333900 Sobic001G193500 Sobic001G193500 Sobic009G161900--Sobic001G193500 Sobic009G161900--Sobic004G066500 Sobic001G424400 Sobic001G424400 Sobic009G161900--Sobic001G424400 Sobic003G378000 Sobic003G378000 Sobic009G161900--Sobic003G378000 Sobic010G170000 Sobic010G170000 Sobic009G161900--Sobic010G170000 Sobic010G177100 Sobic010G177100 Sobic001G460100--Sobic010G177100 Sobic009G188900 Sobic009G188900 Sobic001G460100--Sobic009G188900 Sobic009G113900 Sobic009G113900 Sobic001G460100--Sobic009G113900 Sobic003G084200 Sobic003G084200 Sobic001G460100--Sobic003G084200 Sobic009G012600 Sobic009G012600 Sobic001G460100--Sobic009G012600 Sobic003G024000 Sobic003G024000 Sobic001G460100--Sobic003G024000 Sobic007G050800 Sobic007G050800 Sobic001G460100--Sobic007G050800 Sobic006G275500 Sobic006G275500 Sobic001G460100--Sobic006G275500 Sobic003G102700 Sobic003G102700 Sobic001G460100--Sobic003G102700
Octagon: transcription factors


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