Gene annotation
Transcriptome id Sobic.003G098300.1
Synonym Sb03g008230
Functional annotation hydroxyproline-rich glycoprotein family protein, putative, expressed
UniProt C5XEV1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a023746 , Zm00025a035451
Brachypodium KQK02370
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G098300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G347500 2-phosphoglycerate kinase-related, putative, expressed -
2 Sobic.005G021000 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
3 Sobic.006G208000 DNA repair ATPase-related, putative, expressed -
4 Sobic.001G336200 "Grain Length3.2(Ortholog in rice:Adamski et al., 2009(PubMedID : 31659842)@cytochrome P450, putative, expressed -
5 Sobic.003G419500 xylanase inhibitor, putative, expressed -
6 Sobic.002G232900 helix-loop-helix DNA-binding protein, putative, expressed -
7 Sobic.001G508200 multidrug resistance-associated protein, putative, expressed -
8 Sobic.009G025500 OsRCI2-7 - Putative low temperature and salt responsive protein, expressed -
9 Sobic.002G240000 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
10 Sobic.001G004600 expressed protein -
11 Sobic.001G386600 homeobox domain containing protein, expressed -
12 Sobic.001G254800 cytochrome P450, putative, expressed -
13 Sobic.009G208600 POEI52 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
14 Sobic.007G191500 - -
15 Sobic.010G198900 phytosulfokines 1 precursor, putative, expressed -
16 Sobic.002G062100 exostosin family protein, putative, expressed -
17 Sobic.001G534200 - -
18 Sobic.003G427300 uridine 5-monophosphate synthase, putative, expressed K13421: uridine monophosphate synthetase
19 Sobic.001G261420 - -
20 Sobic.006G217800 helix-loop-helix DNA-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic003G098300 Sobic003G098300 Sobic004G347500 Sobic004G347500 Sobic003G098300--Sobic004G347500 Sobic005G021000 Sobic005G021000 Sobic003G098300--Sobic005G021000 Sobic006G208000 Sobic006G208000 Sobic003G098300--Sobic006G208000 Sobic001G336200 Sobic001G336200 Sobic003G098300--Sobic001G336200 Sobic003G419500 Sobic003G419500 Sobic003G098300--Sobic003G419500 Sobic002G232900 Sobic002G232900 Sobic003G098300--Sobic002G232900 Sobic001G508200 Sobic001G508200 Sobic003G098300--Sobic001G508200 Sobic009G025500 Sobic009G025500 Sobic003G098300--Sobic009G025500 Sobic002G240000 Sobic002G240000 Sobic003G098300--Sobic002G240000 Sobic004G347500--Sobic005G021000 Sobic002G177600 Sobic002G177600 Sobic004G347500--Sobic002G177600 Sobic004G347500--Sobic002G240000 Sobic001G004600 Sobic001G004600 Sobic004G347500--Sobic001G004600 Sobic001G534200 Sobic001G534200 Sobic004G347500--Sobic001G534200 Sobic004G347500--Sobic002G232900 Sobic007G191500 Sobic007G191500 Sobic004G347500--Sobic007G191500 Sobic006G217800 Sobic006G217800 Sobic004G347500--Sobic006G217800 Sobic001G386600 Sobic001G386600 Sobic004G347500--Sobic001G386600 Sobic001G254800 Sobic001G254800 Sobic005G021000--Sobic001G254800 Sobic005G021000--Sobic006G217800 Sobic003G443400 Sobic003G443400 Sobic005G021000--Sobic003G443400 Sobic007G025600 Sobic007G025600 Sobic005G021000--Sobic007G025600 Sobic008G149300 Sobic008G149300 Sobic005G021000--Sobic008G149300 Sobic005G021000--Sobic001G534200 Sobic009G103800 Sobic009G103800 Sobic005G021000--Sobic009G103800 Sobic006G167700 Sobic006G167700 Sobic005G021000--Sobic006G167700 Sobic001G166900 Sobic001G166900 Sobic005G021000--Sobic001G166900 Sobic006G208000--Sobic009G025500 Sobic006G208000--Sobic001G004600 Sobic006G208000--Sobic001G534200 Sobic010G198900 Sobic010G198900 Sobic006G208000--Sobic010G198900 Sobic006G208000--Sobic005G021000 Sobic009G246250 Sobic009G246250 Sobic006G208000--Sobic009G246250 Sobic006G208000--Sobic008G149300 Sobic006G208000--Sobic006G167700 Sobic006G208000--Sobic009G103800 Sobic005G126701 Sobic005G126701 Sobic001G336200--Sobic005G126701 Sobic001G336200--Sobic005G021000 Sobic001G336200--Sobic001G254800 Sobic001G336200--Sobic007G025600 Sobic001G336200--Sobic001G534200 Sobic001G336200--Sobic004G347500 Sobic001G336200--Sobic009G103800 Sobic001G254700 Sobic001G254700 Sobic001G336200--Sobic001G254700 Sobic001G261420 Sobic001G261420 Sobic001G336200--Sobic001G261420 Sobic009G208600 Sobic009G208600 Sobic003G419500--Sobic009G208600 Sobic009G250500 Sobic009G250500 Sobic003G419500--Sobic009G250500 Sobic003G419500--Sobic002G232900 Sobic010G131500 Sobic010G131500 Sobic003G419500--Sobic010G131500 Sobic003G419500--Sobic005G021000 Sobic003G398200 Sobic003G398200 Sobic003G419500--Sobic003G398200 Sobic003G437400 Sobic003G437400 Sobic003G419500--Sobic003G437400 Sobic003G419500--Sobic009G025500 Sobic006G013300 Sobic006G013300 Sobic003G419500--Sobic006G013300 Sobic002G232900--Sobic009G208600 Sobic002G232900--Sobic006G013300 Sobic002G232900--Sobic005G021000 Sobic002G232900--Sobic001G254800 Sobic002G232900--Sobic003G419500 Sobic002G232900--Sobic004G347500 Sobic004G029900 Sobic004G029900 Sobic002G232900--Sobic004G029900 Sobic002G232900--Sobic002G240000 Sobic005G105600 Sobic005G105600 Sobic002G232900--Sobic005G105600 Sobic001G508200--Sobic006G013300 Sobic001G508200--Sobic004G347500 Sobic001G508200--Sobic009G208600 Sobic001G508200--Sobic005G021000 Sobic001G508200--Sobic006G208000 Sobic002G266300 Sobic002G266300 Sobic001G508200--Sobic002G266300 Sobic010G024600 Sobic010G024600 Sobic001G508200--Sobic010G024600 Sobic001G508200--Sobic003G098300 Sobic003G427300 Sobic003G427300 Sobic001G508200--Sobic003G427300 Sobic009G025500--Sobic010G198900 Sobic009G025500--Sobic006G167700 Sobic002G184700 Sobic002G184700 Sobic009G025500--Sobic002G184700 Sobic002G211300 Sobic002G211300 Sobic009G025500--Sobic002G211300 Sobic010G125000 Sobic010G125000 Sobic009G025500--Sobic010G125000 Sobic001G344300 Sobic001G344300 Sobic009G025500--Sobic001G344300 Sobic009G025500--Sobic001G166900 Sobic003G372600 Sobic003G372600 Sobic009G025500--Sobic003G372600 Sobic009G025500--Sobic001G534200 Sobic002G240000--Sobic005G021000 Sobic002G240000--Sobic001G254800 Sobic002G240000--Sobic001G534200 Sobic002G240000--Sobic008G149300 Sobic002G240000--Sobic009G246250 Sobic006G083900 Sobic006G083900 Sobic002G240000--Sobic006G083900 Sobic010G053400 Sobic010G053400 Sobic002G240000--Sobic010G053400 Sobic002G240000--Sobic007G025600 Sobic004G349550 Sobic004G349550 Sobic002G240000--Sobic004G349550
Octagon: transcription factors


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