Gene annotation
Transcriptome id Sobic.007G053100.1
Synonym Sb07g004285
Functional annotation amino acid permease family protein, putative, expressed
UniProt C5YHF7
Pfam PF00324
Panther DB PTHR11785 PTHR11785:SF338
NCBI CDD KOG1287; Amino acid transporters
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0015171amino acid transmembrane transporter activity GO:0003333amino acid transmembrane transport


Orthologs (automatic annotation)
TAIR AT1G31830 : Amino acid permease family protein
RAP-DB (Rice) LOC_Os03g37984.2 : amino acid permease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a055083
Brachypodium KQJ95271 , KQJ95270
Barley HORVU5Hr1G006170.1 , HORVU5Hr1G006170.3 , HORVU5Hr1G006170.2 , HORVU5Hr1G006170.5 , HORVU5Hr1G006170.4 , HORVU5Hr1G006170.6
Wheat TraesCS5B02G019600 , TraesCS5A02G022700 , TraesCS5D02G028100
Populus -


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cDNA sequences
Sobic.007G053100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G266300 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed -
2 Sobic.006G251500 inositol 1,3,4,5,6-pentakisphosphate 2-kinase, putative, expressed K10572: inositol-pentakisphosphate 2-kinase
3 Sobic.006G053200 - -
4 Sobic.001G125400 ethylene-insensitive protein, putative, expressed -
5 Sobic.005G045700 PHD-finger family protein, expressed -
6 Sobic.004G033200 expressed protein -
7 Sobic.003G427300 uridine 5-monophosphate synthase, putative, expressed K13421: uridine monophosphate synthetase
8 Sobic.004G066500 chaperone protein clpB 1, putative, expressed K03695: ATP-dependent Clp protease ATP-binding subunit ClpB
9 Sobic.002G127900 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
10 Sobic.001G508200 multidrug resistance-associated protein, putative, expressed -
11 Sobic.001G125300 ethylene-insensitive protein, putative, expressed K14513: ethylene-insensitive protein 2
12 Sobic.008G191850 - -
13 Sobic.005G021000 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
14 Sobic.001G381000 - -
15 Sobic.001G534200 - -
16 Sobic.001G254800 cytochrome P450, putative, expressed -
17 Sobic.001G004600 expressed protein -
18 Sobic.009G025500 OsRCI2-7 - Putative low temperature and salt responsive protein, expressed -
19 Sobic.006G167700 oleosin, putative, expressed -
20 Sobic.006G208000 DNA repair ATPase-related, putative, expressed -


Gene co-expression network
sample Sobic007G053100 Sobic007G053100 Sobic002G266300 Sobic002G266300 Sobic007G053100--Sobic002G266300 Sobic006G251500 Sobic006G251500 Sobic007G053100--Sobic006G251500 Sobic006G053200 Sobic006G053200 Sobic007G053100--Sobic006G053200 Sobic001G125400 Sobic001G125400 Sobic007G053100--Sobic001G125400 Sobic005G045700 Sobic005G045700 Sobic007G053100--Sobic005G045700 Sobic004G033200 Sobic004G033200 Sobic007G053100--Sobic004G033200 Sobic003G427300 Sobic003G427300 Sobic007G053100--Sobic003G427300 Sobic004G066500 Sobic004G066500 Sobic007G053100--Sobic004G066500 Sobic002G127900 Sobic002G127900 Sobic007G053100--Sobic002G127900 Sobic006G217800 Sobic006G217800 Sobic002G266300--Sobic006G217800 Sobic005G021000 Sobic005G021000 Sobic002G266300--Sobic005G021000 Sobic001G534200 Sobic001G534200 Sobic002G266300--Sobic001G534200 Sobic001G254800 Sobic001G254800 Sobic002G266300--Sobic001G254800 Sobic002G266300--Sobic001G125400 Sobic009G025500 Sobic009G025500 Sobic002G266300--Sobic009G025500 Sobic002G266300--Sobic007G053100 Sobic003G398200 Sobic003G398200 Sobic002G266300--Sobic003G398200 Sobic006G208000 Sobic006G208000 Sobic002G266300--Sobic006G208000 Sobic006G251500--Sobic007G053100 Sobic006G251500--Sobic002G266300 Sobic009G052600 Sobic009G052600 Sobic006G251500--Sobic009G052600 Sobic006G251500--Sobic006G053200 Sobic006G251500--Sobic003G427300 Sobic008G191850 Sobic008G191850 Sobic006G251500--Sobic008G191850 Sobic006G251500--Sobic005G045700 Sobic001G254700 Sobic001G254700 Sobic006G251500--Sobic001G254700 Sobic006G251500--Sobic004G066500 Sobic004G164800 Sobic004G164800 Sobic006G053200--Sobic004G164800 Sobic001G208500 Sobic001G208500 Sobic006G053200--Sobic001G208500 Sobic002G393100 Sobic002G393100 Sobic006G053200--Sobic002G393100 Sobic008G159000 Sobic008G159000 Sobic006G053200--Sobic008G159000 Sobic002G197700 Sobic002G197700 Sobic006G053200--Sobic002G197700 Sobic009G037100 Sobic009G037100 Sobic006G053200--Sobic009G037100 Sobic002G211300 Sobic002G211300 Sobic006G053200--Sobic002G211300 Sobic003G372600 Sobic003G372600 Sobic006G053200--Sobic003G372600 Sobic006G055900 Sobic006G055900 Sobic006G053200--Sobic006G055900 Sobic001G122600 Sobic001G122600 Sobic001G125400--Sobic001G122600 Sobic005G045700--Sobic002G127900 Sobic005G045700--Sobic007G053100 Sobic005G045700--Sobic002G266300 Sobic002G054400 Sobic002G054400 Sobic005G045700--Sobic002G054400 Sobic003G368901 Sobic003G368901 Sobic005G045700--Sobic003G368901 Sobic001G125300 Sobic001G125300 Sobic005G045700--Sobic001G125300 Sobic009G012600 Sobic009G012600 Sobic005G045700--Sobic009G012600 Sobic005G045700--Sobic008G191850 Sobic006G262501 Sobic006G262501 Sobic005G045700--Sobic006G262501 Sobic004G033200--Sobic002G266300 Sobic004G033200--Sobic007G053100 Sobic004G033200--Sobic008G191850 Sobic010G024600 Sobic010G024600 Sobic004G033200--Sobic010G024600 Sobic004G033200--Sobic004G066500 Sobic001G508200 Sobic001G508200 Sobic004G033200--Sobic001G508200 Sobic004G033200--Sobic009G052600 Sobic008G116600 Sobic008G116600 Sobic004G033200--Sobic008G116600 Sobic004G347500 Sobic004G347500 Sobic004G033200--Sobic004G347500 Sobic003G427300--Sobic006G208000 Sobic003G427300--Sobic001G508200 Sobic003G427300--Sobic002G266300 Sobic003G427300--Sobic009G025500 Sobic001G044300 Sobic001G044300 Sobic003G427300--Sobic001G044300 Sobic002G405700 Sobic002G405700 Sobic003G427300--Sobic002G405700 Sobic005G134700 Sobic005G134700 Sobic003G427300--Sobic005G134700 Sobic003G098300 Sobic003G098300 Sobic003G427300--Sobic003G098300 Sobic010G198900 Sobic010G198900 Sobic003G427300--Sobic010G198900 Sobic004G066500--Sobic008G191850 Sobic004G066500--Sobic007G053100 Sobic004G066500--Sobic004G033200 Sobic004G066500--Sobic003G427300 Sobic004G066500--Sobic010G024600 Sobic004G066500--Sobic003G098300 Sobic004G066500--Sobic002G266300 Sobic004G066500--Sobic001G044300 Sobic004G066500--Sobic001G508200 Sobic002G127900--Sobic005G045700 Sobic008G165300 Sobic008G165300 Sobic002G127900--Sobic008G165300 Sobic002G127900--Sobic007G053100 Sobic002G127900--Sobic003G368901 Sobic002G127900--Sobic002G266300 Sobic002G127900--Sobic006G262501 Sobic010G264900 Sobic010G264900 Sobic002G127900--Sobic010G264900 Sobic009G155900 Sobic009G155900 Sobic002G127900--Sobic009G155900 Sobic002G127900--Sobic001G125300
Octagon: transcription factors


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