Gene annotation
Transcriptome id Sobic.008G116600.1
Synonym Sb08g017020
Functional annotation 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative, expressed
UniProt C5YPC1
Pfam PF01676 PF10143
Panther DB PTHR31209 PTHR31209:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT3G30841 : Cofactor-independent phosphoglycerate mutase
RAP-DB (Rice) LOC_Os12g35040.1 : 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, putative, expressed
MaizeGDB (Corn) Zm00025a025543 , Zm00025a054362
Brachypodium KQJ86483
Barley HORVU5Hr1G025900.3 , HORVU5Hr1G025900.2 , HORVU5Hr1G025900.1 , HORVU5Hr1G025900.5 , HORVU5Hr1G025900.4
Wheat TraesCS5A02G095900 , TraesCS5B02G101800 , TraesCS5D02G108500
Populus -


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cDNA sequences
Sobic.008G116600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G033200 expressed protein -
2 Sobic.006G212900 expressed protein K12606: RCD1, CNOT9, CCR4-NOT transcription complex subunit 9
3 Sobic.002G332200 proteasome inhibitor-related, putative, expressed K06700: proteasome inhibitor subunit 1 (PI31)
4 Sobic.002G385300 helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.009G195700 hydrolase, alpha/beta fold family domain containing protein, expressed K01259: proline iminopeptidase
6 Sobic.004G058600 aldehyde dehydrogenase, putative, expressed K17761: succinate-semialdehyde dehydrogenase, mitochondrial
7 Sobic.004G066500 chaperone protein clpB 1, putative, expressed K03695: ATP-dependent Clp protease ATP-binding subunit ClpB
8 Sobic.003G126800 cysteine proteinase inhibitor precursor protein, putative, expressed -
9 Sobic.003G200600 CBS domain containing membrane protein, putative, expressed -
10 Sobic.006G251500 inositol 1,3,4,5,6-pentakisphosphate 2-kinase, putative, expressed K10572: inositol-pentakisphosphate 2-kinase
11 Sobic.004G247100 peptidase, putative, expressed -
12 Sobic.003G252900 AAA-type ATPase family protein, putative, expressed K07767: katanin p60 ATPase-containing subunit A1
13 Sobic.005G175100 - K11594: DDX3X, ATP-dependent RNA helicase DDX3X
14 Sobic.007G053100 amino acid permease family protein, putative, expressed -
15 Sobic.009G161900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@NDP1, putative, expressed -
16 Sobic.010G170000 Triacylglycerol biosynthesis defect 1(PubMedID : 26320239)@O-acyltransferase, putative, expressed K11155: diacylglycerol O-acyltransferase 1
17 Sobic.001G034500 SEC14 cytosolic factor family protein, putative, expressed -
18 Sobic.008G118300 expressed protein -
19 Sobic.008G016100 WD domain, G-beta repeat domain containing protein, expressed K14848: RRB1, ribosome assembly protein RRB1
20 Sobic.003G318800 - -


Gene co-expression network
sample Sobic008G116600 Sobic008G116600 Sobic004G033200 Sobic004G033200 Sobic008G116600--Sobic004G033200 Sobic006G212900 Sobic006G212900 Sobic008G116600--Sobic006G212900 Sobic002G332200 Sobic002G332200 Sobic008G116600--Sobic002G332200 Sobic002G385300 Sobic002G385300 Sobic008G116600--Sobic002G385300 Sobic009G195700 Sobic009G195700 Sobic008G116600--Sobic009G195700 Sobic004G058600 Sobic004G058600 Sobic008G116600--Sobic004G058600 Sobic004G066500 Sobic004G066500 Sobic008G116600--Sobic004G066500 Sobic003G126800 Sobic003G126800 Sobic008G116600--Sobic003G126800 Sobic003G200600 Sobic003G200600 Sobic008G116600--Sobic003G200600 Sobic002G266300 Sobic002G266300 Sobic004G033200--Sobic002G266300 Sobic007G053100 Sobic007G053100 Sobic004G033200--Sobic007G053100 Sobic008G191850 Sobic008G191850 Sobic004G033200--Sobic008G191850 Sobic010G024600 Sobic010G024600 Sobic004G033200--Sobic010G024600 Sobic004G033200--Sobic004G066500 Sobic001G508200 Sobic001G508200 Sobic004G033200--Sobic001G508200 Sobic009G052600 Sobic009G052600 Sobic004G033200--Sobic009G052600 Sobic004G033200--Sobic008G116600 Sobic004G347500 Sobic004G347500 Sobic004G033200--Sobic004G347500 Sobic003G023200 Sobic003G023200 Sobic006G212900--Sobic003G023200 Sobic004G247100 Sobic004G247100 Sobic006G212900--Sobic004G247100 Sobic003G193500 Sobic003G193500 Sobic006G212900--Sobic003G193500 Sobic006G212900--Sobic009G195700 Sobic004G256300 Sobic004G256300 Sobic006G212900--Sobic004G256300 Sobic003G129300 Sobic003G129300 Sobic006G212900--Sobic003G129300 Sobic006G212900--Sobic008G116600 Sobic003G222700 Sobic003G222700 Sobic006G212900--Sobic003G222700 Sobic001G467100 Sobic001G467100 Sobic006G212900--Sobic001G467100 Sobic003G295700 Sobic003G295700 Sobic002G332200--Sobic003G295700 Sobic003G408300 Sobic003G408300 Sobic002G332200--Sobic003G408300 Sobic009G169200 Sobic009G169200 Sobic002G332200--Sobic009G169200 Sobic002G116500 Sobic002G116500 Sobic002G332200--Sobic002G116500 Sobic002G332200--Sobic004G033200 Sobic009G028100 Sobic009G028100 Sobic002G332200--Sobic009G028100 Sobic002G332200--Sobic008G116600 Sobic003G121800 Sobic003G121800 Sobic002G332200--Sobic003G121800 Sobic001G460100 Sobic001G460100 Sobic002G332200--Sobic001G460100 Sobic002G390400 Sobic002G390400 Sobic002G385300--Sobic002G390400 Sobic002G252900 Sobic002G252900 Sobic002G385300--Sobic002G252900 Sobic008G111700 Sobic008G111700 Sobic002G385300--Sobic008G111700 Sobic002G385300--Sobic008G116600 Sobic001G498400 Sobic001G498400 Sobic002G385300--Sobic001G498400 Sobic009G030400 Sobic009G030400 Sobic002G385300--Sobic009G030400 Sobic006G261100 Sobic006G261100 Sobic002G385300--Sobic006G261100 Sobic001G135500 Sobic001G135500 Sobic002G385300--Sobic001G135500 Sobic002G062500 Sobic002G062500 Sobic002G385300--Sobic002G062500 Sobic009G195700--Sobic004G247100 Sobic009G195700--Sobic006G212900 Sobic002G142700 Sobic002G142700 Sobic009G195700--Sobic002G142700 Sobic001G403400 Sobic001G403400 Sobic009G195700--Sobic001G403400 Sobic009G195700--Sobic002G116500 Sobic008G059900 Sobic008G059900 Sobic009G195700--Sobic008G059900 Sobic001G004100 Sobic001G004100 Sobic009G195700--Sobic001G004100 Sobic010G073500 Sobic010G073500 Sobic009G195700--Sobic010G073500 Sobic010G172400 Sobic010G172400 Sobic009G195700--Sobic010G172400 Sobic003G011000 Sobic003G011000 Sobic004G058600--Sobic003G011000 Sobic004G058600--Sobic010G024600 Sobic004G058600--Sobic001G508200 Sobic004G058600--Sobic004G066500 Sobic004G058600--Sobic004G033200 Sobic006G034300 Sobic006G034300 Sobic004G058600--Sobic006G034300 Sobic003G427300 Sobic003G427300 Sobic004G058600--Sobic003G427300 Sobic009G161900 Sobic009G161900 Sobic004G058600--Sobic009G161900 Sobic004G058600--Sobic001G460100 Sobic004G066500--Sobic008G191850 Sobic004G066500--Sobic007G053100 Sobic004G066500--Sobic004G033200 Sobic004G066500--Sobic003G427300 Sobic004G066500--Sobic010G024600 Sobic003G098300 Sobic003G098300 Sobic004G066500--Sobic003G098300 Sobic004G066500--Sobic002G266300 Sobic001G044300 Sobic001G044300 Sobic004G066500--Sobic001G044300 Sobic004G066500--Sobic001G508200 Sobic008G058700 Sobic008G058700 Sobic003G126800--Sobic008G058700 Sobic003G252900 Sobic003G252900 Sobic003G126800--Sobic003G252900 Sobic010G088300 Sobic010G088300 Sobic003G126800--Sobic010G088300 Sobic003G031200 Sobic003G031200 Sobic003G126800--Sobic003G031200 Sobic009G070200 Sobic009G070200 Sobic003G126800--Sobic009G070200 Sobic004G297300 Sobic004G297300 Sobic003G126800--Sobic004G297300 Sobic003G358300 Sobic003G358300 Sobic003G126800--Sobic003G358300 Sobic001G066700 Sobic001G066700 Sobic003G126800--Sobic001G066700 Sobic003G039200 Sobic003G039200 Sobic003G126800--Sobic003G039200 Sobic003G148900 Sobic003G148900 Sobic003G200600--Sobic003G148900 Sobic001G421400 Sobic001G421400 Sobic003G200600--Sobic001G421400 Sobic007G117800 Sobic007G117800 Sobic003G200600--Sobic007G117800 Sobic002G401700 Sobic002G401700 Sobic003G200600--Sobic002G401700 Sobic001G112400 Sobic001G112400 Sobic003G200600--Sobic001G112400 Sobic001G313500 Sobic001G313500 Sobic003G200600--Sobic001G313500 Sobic007G012900 Sobic007G012900 Sobic003G200600--Sobic007G012900 Sobic001G378200 Sobic001G378200 Sobic003G200600--Sobic001G378200 Sobic005G184200 Sobic005G184200 Sobic003G200600--Sobic005G184200
Octagon: transcription factors


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