Gene annotation
Transcriptome id Sobic.004G142500.1
Synonym Sb04g017790
Functional annotation Up-reguralion under drought (PubMedID : 24916767)
late embryogenesis abundant protein D-34, putative, expressed
UniProt C5Y163
Pfam PF04927
Panther DB PTHR31174 PTHR31174:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G22490 : Seed maturation protein
RAP-DB (Rice) LOC_Os06g23350.1 : late embryogenesis abundant protein D-34, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G142500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G354800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.001G492000 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@embryonic protein DC-8, putative, expressed -
3 Sobic.009G168800 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@phosphatidylethanolamine-binding protein, putative, expressed K06910: PEBP1, phosphatidylethanolamine-binding protein
4 Sobic.003G271800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@late embryogenesis abundant protein, group 3, putative, expressed -
5 Sobic.001G109000 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
6 Sobic.002G383500 expressed protein -
7 Sobic.005G138500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.006G269501 - -
9 Sobic.002G151200 seed maturation protein LEA 4, putative, expressed -
10 Sobic.002G143300 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
11 Sobic.003G236551 - -
12 Sobic.001G515700 expressed protein -
13 Sobic.010G133000 late embryogenesis abundant group 1, putative, expressed -
14 Sobic.001G057500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@basic proline-rich protein precursor, putative, expressed -
15 Sobic.007G004900 expressed protein -
16 Sobic.001G307000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.007G088300 late embryogenesis abundant group 1, putative, expressed -
18 Sobic.002G413200 glucosyltransferase, putative, expressed -
19 Sobic.004G047900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
20 Sobic.003G011000 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@AAA-type ATPase family protein, putative, expressed -


Gene co-expression network
sample Sobic004G142500 Sobic004G142500 Sobic001G354800 Sobic001G354800 Sobic004G142500--Sobic001G354800 Sobic001G492000 Sobic001G492000 Sobic004G142500--Sobic001G492000 Sobic009G168800 Sobic009G168800 Sobic004G142500--Sobic009G168800 Sobic003G271800 Sobic003G271800 Sobic004G142500--Sobic003G271800 Sobic001G109000 Sobic001G109000 Sobic004G142500--Sobic001G109000 Sobic002G383500 Sobic002G383500 Sobic004G142500--Sobic002G383500 Sobic005G138500 Sobic005G138500 Sobic004G142500--Sobic005G138500 Sobic006G269501 Sobic006G269501 Sobic004G142500--Sobic006G269501 Sobic002G151200 Sobic002G151200 Sobic004G142500--Sobic002G151200 Sobic001G354800--Sobic001G109000 Sobic001G354800--Sobic001G492000 Sobic001G354800--Sobic009G168800 Sobic001G354800--Sobic004G142500 Sobic001G354800--Sobic002G151200 Sobic001G354800--Sobic006G269501 Sobic001G307000 Sobic001G307000 Sobic001G354800--Sobic001G307000 Sobic001G354800--Sobic005G138500 Sobic009G215700 Sobic009G215700 Sobic001G354800--Sobic009G215700 Sobic001G492000--Sobic001G109000 Sobic001G492000--Sobic009G215700 Sobic001G492000--Sobic002G151200 Sobic001G492000--Sobic001G354800 Sobic001G492000--Sobic004G142500 Sobic007G088300 Sobic007G088300 Sobic001G492000--Sobic007G088300 Sobic001G492000--Sobic009G168800 Sobic001G492000--Sobic006G269501 Sobic006G118500 Sobic006G118500 Sobic001G492000--Sobic006G118500 Sobic009G168800--Sobic001G354800 Sobic009G168800--Sobic001G109000 Sobic009G168800--Sobic001G492000 Sobic009G168800--Sobic004G142500 Sobic009G168800--Sobic002G151200 Sobic009G168800--Sobic006G269501 Sobic009G168800--Sobic005G138500 Sobic009G168800--Sobic001G307000 Sobic004G047900 Sobic004G047900 Sobic009G168800--Sobic004G047900 Sobic003G236551 Sobic003G236551 Sobic003G271800--Sobic003G236551 Sobic010G133000 Sobic010G133000 Sobic003G271800--Sobic010G133000 Sobic003G271800--Sobic004G142500 Sobic010G041900 Sobic010G041900 Sobic003G271800--Sobic010G041900 Sobic001G404300 Sobic001G404300 Sobic003G271800--Sobic001G404300 Sobic001G396900 Sobic001G396900 Sobic003G271800--Sobic001G396900 Sobic002G413200 Sobic002G413200 Sobic003G271800--Sobic002G413200 Sobic003G130400 Sobic003G130400 Sobic003G271800--Sobic003G130400 Sobic003G271800--Sobic005G138500 Sobic001G109000--Sobic001G492000 Sobic001G109000--Sobic001G354800 Sobic001G109000--Sobic009G215700 Sobic001G109000--Sobic002G151200 Sobic001G109000--Sobic009G168800 Sobic006G104000 Sobic006G104000 Sobic001G109000--Sobic006G104000 Sobic001G109000--Sobic001G307000 Sobic001G200700 Sobic001G200700 Sobic001G109000--Sobic001G200700 Sobic001G109000--Sobic004G142500 Sobic007G004900 Sobic007G004900 Sobic002G383500--Sobic007G004900 Sobic002G143300 Sobic002G143300 Sobic002G383500--Sobic002G143300 Sobic001G144900 Sobic001G144900 Sobic002G383500--Sobic001G144900 Sobic006G084100 Sobic006G084100 Sobic002G383500--Sobic006G084100 Sobic002G138000 Sobic002G138000 Sobic002G383500--Sobic002G138000 Sobic002G231100 Sobic002G231100 Sobic002G383500--Sobic002G231100 Sobic009G026850 Sobic009G026850 Sobic002G383500--Sobic009G026850 Sobic001G497700 Sobic001G497700 Sobic002G383500--Sobic001G497700 Sobic001G311200 Sobic001G311200 Sobic002G383500--Sobic001G311200 Sobic005G138500--Sobic006G269501 Sobic005G138500--Sobic001G396900 Sobic009G171400 Sobic009G171400 Sobic005G138500--Sobic009G171400 Sobic005G138500--Sobic002G413200 Sobic004G114600 Sobic004G114600 Sobic005G138500--Sobic004G114600 Sobic006G050600 Sobic006G050600 Sobic005G138500--Sobic006G050600 Sobic005G138500--Sobic002G143300 Sobic006G034300 Sobic006G034300 Sobic005G138500--Sobic006G034300 Sobic004G243300 Sobic004G243300 Sobic005G138500--Sobic004G243300 Sobic006G269501--Sobic002G151200 Sobic006G269501--Sobic005G138500 Sobic006G269501--Sobic004G243300 Sobic006G269501--Sobic002G143300 Sobic006G269501--Sobic009G171400 Sobic006G269501--Sobic001G396900 Sobic006G269501--Sobic006G050600 Sobic006G269501--Sobic001G354800 Sobic006G269501--Sobic001G492000 Sobic002G151200--Sobic006G269501 Sobic002G151200--Sobic001G492000 Sobic002G151200--Sobic009G215700 Sobic002G151200--Sobic001G109000 Sobic002G151200--Sobic005G138500 Sobic002G151200--Sobic001G354800 Sobic002G151200--Sobic004G243300 Sobic002G151200--Sobic002G383500 Sobic002G151200--Sobic007G004900
Octagon: transcription factors


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