Gene annotation
Transcriptome id Sobic.002G151200.1
Synonym Sb02g018540, LEA4-5
Functional annotation seed maturation protein LEA 4, putative, expressed
UniProt A0A1B6QBG6
Pfam PF03760
Panther DB PTHR33493 PTHR33493:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009790; embryo development


Orthologs (automatic annotation)
TAIR AT5G06760 : Late Embryogenesis Abundant 4-5
RAP-DB (Rice) LOC_Os09g10620.1 : seed maturation protein LEA 4, putative, expressed
MaizeGDB (Corn) Zm00025a046230
Brachypodium -
Barley HORVU7Hr1G100150.1
Wheat -
Populus -


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cDNA sequences
Sobic.002G151200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G269501 - -
2 Sobic.001G492000 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@embryonic protein DC-8, putative, expressed -
3 Sobic.009G215700 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@late embryogenesis abundant protein, group 3, putative, expressed -
4 Sobic.001G109000 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
5 Sobic.005G138500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G354800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.004G243300 expressed protein -
8 Sobic.002G383500 expressed protein -
9 Sobic.007G004900 expressed protein -
10 Sobic.009G168800 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@phosphatidylethanolamine-binding protein, putative, expressed K06910: PEBP1, phosphatidylethanolamine-binding protein
11 Sobic.001G200700 expressed protein -
12 Sobic.006G248600 expressed protein -
13 Sobic.004G047900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
14 Sobic.002G143300 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
15 Sobic.003G194400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
16 Sobic.004G142500 Up-reguralion under drought(PubMedID : 24916767)@late embryogenesis abundant protein D-34, putative, expressed -
17 Sobic.001G307000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.010G101300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@dehydrogenase E1 component domain containing protein, expressed K00161: PDHA, pyruvate dehydrogenase E1 component alpha subunit
19 Sobic.007G088300 late embryogenesis abundant group 1, putative, expressed -
20 Sobic.009G171400 oxidoreductase, aldo/keto reductase family protein, putative, expressed -


Gene co-expression network
sample Sobic002G151200 Sobic002G151200 Sobic006G269501 Sobic006G269501 Sobic002G151200--Sobic006G269501 Sobic001G492000 Sobic001G492000 Sobic002G151200--Sobic001G492000 Sobic009G215700 Sobic009G215700 Sobic002G151200--Sobic009G215700 Sobic001G109000 Sobic001G109000 Sobic002G151200--Sobic001G109000 Sobic005G138500 Sobic005G138500 Sobic002G151200--Sobic005G138500 Sobic001G354800 Sobic001G354800 Sobic002G151200--Sobic001G354800 Sobic004G243300 Sobic004G243300 Sobic002G151200--Sobic004G243300 Sobic002G383500 Sobic002G383500 Sobic002G151200--Sobic002G383500 Sobic007G004900 Sobic007G004900 Sobic002G151200--Sobic007G004900 Sobic006G269501--Sobic002G151200 Sobic006G269501--Sobic005G138500 Sobic006G269501--Sobic004G243300 Sobic002G143300 Sobic002G143300 Sobic006G269501--Sobic002G143300 Sobic009G171400 Sobic009G171400 Sobic006G269501--Sobic009G171400 Sobic001G396900 Sobic001G396900 Sobic006G269501--Sobic001G396900 Sobic006G050600 Sobic006G050600 Sobic006G269501--Sobic006G050600 Sobic006G269501--Sobic001G354800 Sobic006G269501--Sobic001G492000 Sobic001G492000--Sobic001G109000 Sobic001G492000--Sobic009G215700 Sobic001G492000--Sobic002G151200 Sobic001G492000--Sobic001G354800 Sobic004G142500 Sobic004G142500 Sobic001G492000--Sobic004G142500 Sobic007G088300 Sobic007G088300 Sobic001G492000--Sobic007G088300 Sobic009G168800 Sobic009G168800 Sobic001G492000--Sobic009G168800 Sobic001G492000--Sobic006G269501 Sobic006G118500 Sobic006G118500 Sobic001G492000--Sobic006G118500 Sobic009G215700--Sobic001G492000 Sobic009G215700--Sobic002G151200 Sobic009G215700--Sobic001G109000 Sobic009G215700--Sobic006G269501 Sobic009G215700--Sobic001G354800 Sobic001G200700 Sobic001G200700 Sobic009G215700--Sobic001G200700 Sobic002G132500 Sobic002G132500 Sobic009G215700--Sobic002G132500 Sobic009G215700--Sobic006G118500 Sobic006G104000 Sobic006G104000 Sobic009G215700--Sobic006G104000 Sobic001G109000--Sobic001G492000 Sobic001G109000--Sobic001G354800 Sobic001G109000--Sobic009G215700 Sobic001G109000--Sobic002G151200 Sobic001G109000--Sobic009G168800 Sobic001G109000--Sobic006G104000 Sobic001G307000 Sobic001G307000 Sobic001G109000--Sobic001G307000 Sobic001G109000--Sobic001G200700 Sobic001G109000--Sobic004G142500 Sobic005G138500--Sobic006G269501 Sobic005G138500--Sobic001G396900 Sobic005G138500--Sobic009G171400 Sobic002G413200 Sobic002G413200 Sobic005G138500--Sobic002G413200 Sobic004G114600 Sobic004G114600 Sobic005G138500--Sobic004G114600 Sobic005G138500--Sobic006G050600 Sobic005G138500--Sobic002G143300 Sobic006G034300 Sobic006G034300 Sobic005G138500--Sobic006G034300 Sobic005G138500--Sobic004G243300 Sobic001G354800--Sobic001G109000 Sobic001G354800--Sobic001G492000 Sobic001G354800--Sobic009G168800 Sobic001G354800--Sobic004G142500 Sobic001G354800--Sobic002G151200 Sobic001G354800--Sobic006G269501 Sobic001G354800--Sobic001G307000 Sobic001G354800--Sobic005G138500 Sobic001G354800--Sobic009G215700 Sobic003G194400 Sobic003G194400 Sobic004G243300--Sobic003G194400 Sobic010G101300 Sobic010G101300 Sobic004G243300--Sobic010G101300 Sobic003G292400 Sobic003G292400 Sobic004G243300--Sobic003G292400 Sobic004G243300--Sobic001G200700 Sobic004G243300--Sobic009G171400 Sobic006G114700 Sobic006G114700 Sobic004G243300--Sobic006G114700 Sobic004G047900 Sobic004G047900 Sobic004G243300--Sobic004G047900 Sobic004G243300--Sobic005G138500 Sobic004G243300--Sobic006G269501 Sobic002G383500--Sobic007G004900 Sobic002G383500--Sobic002G143300 Sobic001G144900 Sobic001G144900 Sobic002G383500--Sobic001G144900 Sobic006G084100 Sobic006G084100 Sobic002G383500--Sobic006G084100 Sobic002G138000 Sobic002G138000 Sobic002G383500--Sobic002G138000 Sobic002G231100 Sobic002G231100 Sobic002G383500--Sobic002G231100 Sobic009G026850 Sobic009G026850 Sobic002G383500--Sobic009G026850 Sobic001G497700 Sobic001G497700 Sobic002G383500--Sobic001G497700 Sobic001G311200 Sobic001G311200 Sobic002G383500--Sobic001G311200 Sobic007G004900--Sobic001G311200 Sobic004G111500 Sobic004G111500 Sobic007G004900--Sobic004G111500 Sobic007G004900--Sobic002G383500 Sobic001G091000 Sobic001G091000 Sobic007G004900--Sobic001G091000 Sobic007G004900--Sobic006G084100 Sobic007G004900--Sobic001G144900 Sobic004G092700 Sobic004G092700 Sobic007G004900--Sobic004G092700 Sobic002G243100 Sobic002G243100 Sobic007G004900--Sobic002G243100 Sobic007G004900--Sobic002G231100
Octagon: transcription factors


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