Gene annotation
Transcriptome id Sobic.009G215700.2,Sobic.009G215700.1
Synonym Sb09g027110,
Functional annotation Up-reguralion under drought (PubMedID : 24916767)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
Up-reguralion under drought (PubMedID : 24916767)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
late embryogenesis abundant protein, group 3, putative, expressed
UniProt J7FIP5 , A0A1B6P9Q8 , C9EF61 , J7FIJ2 , J7FJG8
Pfam -
Panther DB PTHR23241
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G15670 : Late embryogenesis abundant protein (LEA) family protein
RAP-DB (Rice) LOC_Os05g46480.2 : late embryogenesis abundant protein, group 3, putative, expressed
MaizeGDB (Corn) Zm00025a044420
Brachypodium -
Barley -
Wheat TraesCS1A02G364000 , TraesCS1A02G364000 , TraesCS1B02G381200 , TraesCS1B02G381200 , TraesCS1D02G369200
Populus -


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cDNA sequences
Sobic.009G215700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G492000 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@embryonic protein DC-8, putative, expressed -
2 Sobic.002G151200 seed maturation protein LEA 4, putative, expressed -
3 Sobic.001G109000 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
4 Sobic.006G269501 - -
5 Sobic.001G354800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G200700 expressed protein -
7 Sobic.002G132500 - -
8 Sobic.006G118500 OsFBDUF36 - F-box and DUF domain containing protein, expressed -
9 Sobic.006G104000 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
10 Sobic.007G088300 late embryogenesis abundant group 1, putative, expressed -
11 Sobic.006G009800 - -
12 Sobic.003G015700 endoglucanase precursor, putative, expressed -
13 Sobic.003G278200 potassium channel AKT1, putative, expressed -
14 Sobic.009G168800 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@phosphatidylethanolamine-binding protein, putative, expressed K06910: PEBP1, phosphatidylethanolamine-binding protein
15 Sobic.003G011400 similar to Os01g0225600 protein(PubMedID : 29862293)@late embryogenesis abundant protein, putative, expressed -
16 Sobic.005G227900 STIGL3 - Stigma-specific Stig1 family protein precursor, putative, expressed -
17 Sobic.004G047900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
18 Sobic.004G243300 expressed protein -
19 Sobic.001G515700 expressed protein -
20 Sobic.002G383500 expressed protein -


Gene co-expression network
sample Sobic009G215700 Sobic009G215700 Sobic001G492000 Sobic001G492000 Sobic009G215700--Sobic001G492000 Sobic002G151200 Sobic002G151200 Sobic009G215700--Sobic002G151200 Sobic001G109000 Sobic001G109000 Sobic009G215700--Sobic001G109000 Sobic006G269501 Sobic006G269501 Sobic009G215700--Sobic006G269501 Sobic001G354800 Sobic001G354800 Sobic009G215700--Sobic001G354800 Sobic001G200700 Sobic001G200700 Sobic009G215700--Sobic001G200700 Sobic002G132500 Sobic002G132500 Sobic009G215700--Sobic002G132500 Sobic006G118500 Sobic006G118500 Sobic009G215700--Sobic006G118500 Sobic006G104000 Sobic006G104000 Sobic009G215700--Sobic006G104000 Sobic001G492000--Sobic001G109000 Sobic001G492000--Sobic009G215700 Sobic001G492000--Sobic002G151200 Sobic001G492000--Sobic001G354800 Sobic004G142500 Sobic004G142500 Sobic001G492000--Sobic004G142500 Sobic007G088300 Sobic007G088300 Sobic001G492000--Sobic007G088300 Sobic009G168800 Sobic009G168800 Sobic001G492000--Sobic009G168800 Sobic001G492000--Sobic006G269501 Sobic001G492000--Sobic006G118500 Sobic002G151200--Sobic006G269501 Sobic002G151200--Sobic001G492000 Sobic002G151200--Sobic009G215700 Sobic002G151200--Sobic001G109000 Sobic005G138500 Sobic005G138500 Sobic002G151200--Sobic005G138500 Sobic002G151200--Sobic001G354800 Sobic004G243300 Sobic004G243300 Sobic002G151200--Sobic004G243300 Sobic002G383500 Sobic002G383500 Sobic002G151200--Sobic002G383500 Sobic007G004900 Sobic007G004900 Sobic002G151200--Sobic007G004900 Sobic001G109000--Sobic001G492000 Sobic001G109000--Sobic001G354800 Sobic001G109000--Sobic009G215700 Sobic001G109000--Sobic002G151200 Sobic001G109000--Sobic009G168800 Sobic001G109000--Sobic006G104000 Sobic001G307000 Sobic001G307000 Sobic001G109000--Sobic001G307000 Sobic001G109000--Sobic001G200700 Sobic001G109000--Sobic004G142500 Sobic006G269501--Sobic002G151200 Sobic006G269501--Sobic005G138500 Sobic006G269501--Sobic004G243300 Sobic002G143300 Sobic002G143300 Sobic006G269501--Sobic002G143300 Sobic009G171400 Sobic009G171400 Sobic006G269501--Sobic009G171400 Sobic001G396900 Sobic001G396900 Sobic006G269501--Sobic001G396900 Sobic006G050600 Sobic006G050600 Sobic006G269501--Sobic006G050600 Sobic006G269501--Sobic001G354800 Sobic006G269501--Sobic001G492000 Sobic001G354800--Sobic001G109000 Sobic001G354800--Sobic001G492000 Sobic001G354800--Sobic009G168800 Sobic001G354800--Sobic004G142500 Sobic001G354800--Sobic002G151200 Sobic001G354800--Sobic006G269501 Sobic001G354800--Sobic001G307000 Sobic001G354800--Sobic005G138500 Sobic001G354800--Sobic009G215700 Sobic003G011400 Sobic003G011400 Sobic001G200700--Sobic003G011400 Sobic003G194400 Sobic003G194400 Sobic001G200700--Sobic003G194400 Sobic003G292400 Sobic003G292400 Sobic001G200700--Sobic003G292400 Sobic010G101300 Sobic010G101300 Sobic001G200700--Sobic010G101300 Sobic001G200700--Sobic002G132500 Sobic009G046200 Sobic009G046200 Sobic001G200700--Sobic009G046200 Sobic001G200700--Sobic006G104000 Sobic005G183200 Sobic005G183200 Sobic001G200700--Sobic005G183200 Sobic009G116700 Sobic009G116700 Sobic001G200700--Sobic009G116700 Sobic003G278200 Sobic003G278200 Sobic002G132500--Sobic003G278200 Sobic002G132500--Sobic006G104000 Sobic002G132500--Sobic003G011400 Sobic003G024600 Sobic003G024600 Sobic002G132500--Sobic003G024600 Sobic001G466450 Sobic001G466450 Sobic002G132500--Sobic001G466450 Sobic003G429101 Sobic003G429101 Sobic006G118500--Sobic003G429101 Sobic006G118500--Sobic001G492000 Sobic010G212900 Sobic010G212900 Sobic006G118500--Sobic010G212900 Sobic001G322766 Sobic001G322766 Sobic006G118500--Sobic001G322766 Sobic010G262650 Sobic010G262650 Sobic006G118500--Sobic010G262650 Sobic006G118500--Sobic007G088300 Sobic002G348200 Sobic002G348200 Sobic006G118500--Sobic002G348200 Sobic001G220066 Sobic001G220066 Sobic006G118500--Sobic001G220066 Sobic002G333200 Sobic002G333200 Sobic006G118500--Sobic002G333200 Sobic006G104000--Sobic009G046200 Sobic006G104000--Sobic002G132500 Sobic006G104000--Sobic003G011400 Sobic006G104000--Sobic003G024600 Sobic006G104000--Sobic001G466450
Octagon: transcription factors


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