Gene annotation
Transcriptome id Sobic.001G492000.1
Synonym Sb01g046000,
Functional annotation Up-reguralion under drought (PubMedID : 24916767)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
embryonic protein DC-8, putative, expressed
UniProt C5WWS5
Pfam -
Panther DB PTHR23241 PTHR23241:SF63
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G18340 : late embryogenesis abundant domain-containing protein / LEA domain-containing protein
RAP-DB (Rice) LOC_Os03g07180.1 : embryonic protein DC-8, putative, expressed
MaizeGDB (Corn) Zm00025a000833
Brachypodium KQK23451 , KQK23450 , KQK03888
Barley HORVU4Hr1G074750.1 , HORVU4Hr1G074750.2
Wheat TraesCS4D02G282400 , TraesCS4A02G020000
Populus -


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cDNA sequences
Sobic.001G492000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G109000 Up-reguralion under drought(PubMedID : 24916767)@expressed protein -
2 Sobic.009G215700 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@late embryogenesis abundant protein, group 3, putative, expressed -
3 Sobic.002G151200 seed maturation protein LEA 4, putative, expressed -
4 Sobic.001G354800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.004G142500 Up-reguralion under drought(PubMedID : 24916767)@late embryogenesis abundant protein D-34, putative, expressed -
6 Sobic.007G088300 late embryogenesis abundant group 1, putative, expressed -
7 Sobic.009G168800 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@phosphatidylethanolamine-binding protein, putative, expressed K06910: PEBP1, phosphatidylethanolamine-binding protein
8 Sobic.006G269501 - -
9 Sobic.006G118500 OsFBDUF36 - F-box and DUF domain containing protein, expressed -
10 Sobic.001G515700 expressed protein -
11 Sobic.002G383500 expressed protein -
12 Sobic.007G004900 expressed protein -
13 Sobic.005G138500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G047900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
15 Sobic.006G084100 expressed protein -
16 Sobic.002G243100 expressed protein -
17 Sobic.001G200700 expressed protein -
18 Sobic.007G194900 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@OsFBX303 - F-box domain containing protein, expressed -
19 Sobic.001G307000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.006G104000 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3


Gene co-expression network
sample Sobic001G492000 Sobic001G492000 Sobic001G109000 Sobic001G109000 Sobic001G492000--Sobic001G109000 Sobic009G215700 Sobic009G215700 Sobic001G492000--Sobic009G215700 Sobic002G151200 Sobic002G151200 Sobic001G492000--Sobic002G151200 Sobic001G354800 Sobic001G354800 Sobic001G492000--Sobic001G354800 Sobic004G142500 Sobic004G142500 Sobic001G492000--Sobic004G142500 Sobic007G088300 Sobic007G088300 Sobic001G492000--Sobic007G088300 Sobic009G168800 Sobic009G168800 Sobic001G492000--Sobic009G168800 Sobic006G269501 Sobic006G269501 Sobic001G492000--Sobic006G269501 Sobic006G118500 Sobic006G118500 Sobic001G492000--Sobic006G118500 Sobic001G109000--Sobic001G492000 Sobic001G109000--Sobic001G354800 Sobic001G109000--Sobic009G215700 Sobic001G109000--Sobic002G151200 Sobic001G109000--Sobic009G168800 Sobic006G104000 Sobic006G104000 Sobic001G109000--Sobic006G104000 Sobic001G307000 Sobic001G307000 Sobic001G109000--Sobic001G307000 Sobic001G200700 Sobic001G200700 Sobic001G109000--Sobic001G200700 Sobic001G109000--Sobic004G142500 Sobic009G215700--Sobic001G492000 Sobic009G215700--Sobic002G151200 Sobic009G215700--Sobic001G109000 Sobic009G215700--Sobic006G269501 Sobic009G215700--Sobic001G354800 Sobic009G215700--Sobic001G200700 Sobic002G132500 Sobic002G132500 Sobic009G215700--Sobic002G132500 Sobic009G215700--Sobic006G118500 Sobic009G215700--Sobic006G104000 Sobic002G151200--Sobic006G269501 Sobic002G151200--Sobic001G492000 Sobic002G151200--Sobic009G215700 Sobic002G151200--Sobic001G109000 Sobic005G138500 Sobic005G138500 Sobic002G151200--Sobic005G138500 Sobic002G151200--Sobic001G354800 Sobic004G243300 Sobic004G243300 Sobic002G151200--Sobic004G243300 Sobic002G383500 Sobic002G383500 Sobic002G151200--Sobic002G383500 Sobic007G004900 Sobic007G004900 Sobic002G151200--Sobic007G004900 Sobic001G354800--Sobic001G109000 Sobic001G354800--Sobic001G492000 Sobic001G354800--Sobic009G168800 Sobic001G354800--Sobic004G142500 Sobic001G354800--Sobic002G151200 Sobic001G354800--Sobic006G269501 Sobic001G354800--Sobic001G307000 Sobic001G354800--Sobic005G138500 Sobic001G354800--Sobic009G215700 Sobic004G142500--Sobic001G354800 Sobic004G142500--Sobic001G492000 Sobic004G142500--Sobic009G168800 Sobic003G271800 Sobic003G271800 Sobic004G142500--Sobic003G271800 Sobic004G142500--Sobic001G109000 Sobic004G142500--Sobic002G383500 Sobic004G142500--Sobic005G138500 Sobic004G142500--Sobic006G269501 Sobic004G142500--Sobic002G151200 Sobic001G515700 Sobic001G515700 Sobic007G088300--Sobic001G515700 Sobic002G243100 Sobic002G243100 Sobic007G088300--Sobic002G243100 Sobic004G196900 Sobic004G196900 Sobic007G088300--Sobic004G196900 Sobic003G241400 Sobic003G241400 Sobic007G088300--Sobic003G241400 Sobic006G196700 Sobic006G196700 Sobic007G088300--Sobic006G196700 Sobic002G089300 Sobic002G089300 Sobic007G088300--Sobic002G089300 Sobic001G388100 Sobic001G388100 Sobic007G088300--Sobic001G388100 Sobic004G196000 Sobic004G196000 Sobic007G088300--Sobic004G196000 Sobic001G495850 Sobic001G495850 Sobic007G088300--Sobic001G495850 Sobic009G168800--Sobic001G354800 Sobic009G168800--Sobic001G109000 Sobic009G168800--Sobic001G492000 Sobic009G168800--Sobic004G142500 Sobic009G168800--Sobic002G151200 Sobic009G168800--Sobic006G269501 Sobic009G168800--Sobic005G138500 Sobic009G168800--Sobic001G307000 Sobic004G047900 Sobic004G047900 Sobic009G168800--Sobic004G047900 Sobic006G269501--Sobic002G151200 Sobic006G269501--Sobic005G138500 Sobic006G269501--Sobic004G243300 Sobic002G143300 Sobic002G143300 Sobic006G269501--Sobic002G143300 Sobic009G171400 Sobic009G171400 Sobic006G269501--Sobic009G171400 Sobic001G396900 Sobic001G396900 Sobic006G269501--Sobic001G396900 Sobic006G050600 Sobic006G050600 Sobic006G269501--Sobic006G050600 Sobic006G269501--Sobic001G354800 Sobic006G269501--Sobic001G492000 Sobic003G429101 Sobic003G429101 Sobic006G118500--Sobic003G429101 Sobic006G118500--Sobic001G492000 Sobic010G212900 Sobic010G212900 Sobic006G118500--Sobic010G212900 Sobic001G322766 Sobic001G322766 Sobic006G118500--Sobic001G322766 Sobic010G262650 Sobic010G262650 Sobic006G118500--Sobic010G262650 Sobic006G118500--Sobic007G088300 Sobic002G348200 Sobic002G348200 Sobic006G118500--Sobic002G348200 Sobic001G220066 Sobic001G220066 Sobic006G118500--Sobic001G220066 Sobic002G333200 Sobic002G333200 Sobic006G118500--Sobic002G333200
Octagon: transcription factors


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