Gene annotation
| Transcriptome id | Sobic.006G104000.2 |
|---|---|
| Synonym | Sb06g018710 |
| Functional annotation | ethylene-insensitive 3, putative, expressed |
| UniProt | A0A1B6PLA5 |
| Pfam | PF04873 |
| Panther DB | PTHR33305 PTHR33305:SF4 |
| NCBI CDD | - |
| KEGG Orthology | K14514; ethylene-insensitive protein 3 |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT5G65100 : Ethylene insensitive 3 family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os04g38400.1 : ethylene-insensitive 3, putative, expressed |
| MaizeGDB (Corn) | Zm00025a015466 , Zm00025a031708 , Zm00025a020791 , Zm00025a011141 |
| Brachypodium | KQJ82936 , KQK00008 , PNT68889 |
| Barley | HORVU3Hr1G089250.3 , HORVU3Hr1G089250.2 , HORVU3Hr1G089250.5 , HORVU3Hr1G089250.4 , HORVU2Hr1G079900.1 , HORVU3Hr1G089250.1 |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.009G046200 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@peripheral-type benzodiazepine receptor, putative, expressed | - |
| 2 | Sobic.002G132500 | - | - |
| 3 | Sobic.003G011400 | similar to Os01g0225600 protein(PubMedID : 29862293)@late embryogenesis abundant protein, putative, expressed | - |
| 4 | Sobic.003G024600 | CAMK_KIN1/SNF1/Nim1_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | - |
| 5 | Sobic.001G466450 | - | - |
| 6 | Sobic.001G466450 | - | - |
| 7 | Sobic.001G466450 | - | - |
| 8 | Sobic.001G466450 | - | - |
| 9 | Sobic.001G466450 | - | - |
| 10 | Sobic.001G466450 | - | - |
| 11 | Sobic.001G466450 | - | - |
| 12 | Sobic.001G373600 | Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed | K15382: SLC50A, solute carrier family 50 (sugar transporter) |
| 13 | Sobic.007G164500 | - | - |
| 14 | Sobic.003G278200 | potassium channel AKT1, putative, expressed | - |
| 15 | Sobic.002G097000 | expressed protein | - |
| 16 | Sobic.001G323600 | transporter family protein, putative, expressed | - |
| 17 | Sobic.001G200700 | expressed protein | - |
| 18 | Sobic.001G409400 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@OsRCI2-5 - Putative low temperature and salt responsive protein, expressed | - |
| 19 | Sobic.005G088700 | expressed protein | - |
| 20 | Sobic.009G116700 | "dehydrin SbDHN1, maps into mapped into a stay green mQTL (QSTG meta1.9)"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@rab16/17 homolog(PubMedID : 15579713)@dehydrin, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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