Gene annotation
Transcriptome id Sobic.009G116700.1
Synonym SbDHN2, Sb09g018420, ATDI8, RAB18, SbDHN1;SbDHN1;SbDHN1;SbDHN1;ABA-responsive gene rab17 homolog
Functional annotation "dehydrin SbDHN1, maps into mapped into a stay green mQTL (QSTG meta1.9)" (PubMedID : 24655390)
SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
Up-reguralion under drought (PubMedID : 24916767)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
rab16/17 homolog (PubMedID : 15579713)
dehydrin, putative, expressed
UniProt A0A140HF71 , Q41287 , Q41299 , C5YX70
Pfam PF00257
Panther DB PTHR33346
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009415; response to water GO:0006950response to stress


Orthologs (automatic annotation)
TAIR AT3G50980 : dehydrin xero 1
RAP-DB (Rice) LOC_Os11g26780.1 : dehydrin, putative, expressed
MaizeGDB (Corn) Zm00025a043321
Brachypodium KQJ88959 , KQJ99556 , KQK17893 , KQK09367 , KQJ99554
Barley HORVU6Hr1G084010.2 , HORVU6Hr1G084070.10 , HORVU6Hr1G084070.13 , HORVU5Hr1G103460.3 , HORVU5Hr1G103460.2 , HORVU5Hr1G103460.1 , HORVU6Hr1G084010.8 , HORVU6Hr1G084010.6 , HORVU6Hr1G084010.5 , HORVU6Hr1G084010.4 , HORVU6Hr1G084070.11 , HORVU6Hr1G084070.12 , HORVU5Hr1G092150.1 , HORVU6Hr1G084070.9 , HORVU6Hr1G084070.8 , HORVU6Hr1G084070.1 , HORVU6Hr1G084010.1 , HORVU6Hr1G084070.3 , HORVU6Hr1G084070.2 , HORVU6Hr1G084070.5 , HORVU6Hr1G084070.4 , HORVU6Hr1G084070.7 , HORVU6Hr1G084070.6 , HORVU6Hr1G011050.1 , HORVU5Hr1G092100.1 , HORVU6Hr1G084010.3 , HORVU6Hr1G084010.7
Wheat TraesCS5A02G424700 , TraesCS6B02G383500 , TraesCS6B02G383500 , TraesCS6B02G383600 , TraesCS6D02G333100 , TraesCS5B02G426800 , TraesCSU02G086200 , TraesCS6A02G350600 , TraesCS5D02G433200 , TraesCS5B02G426700 , TraesCS5D02G379300 , TraesCS5B02G372100 , TraesCS6D02G333000 , TraesCS6A02G059800 , TraesCS6A02G350700 , TraesCS6D02G333600 , TraesCS5A02G369800 , TraesCS6A02G350300 , TraesCS5D02G433300 , TraesCS6D02G332900 , TraesCS6D02G332900 , TraesCS5D02G379200 , TraesCSU02G122200 , TraesCS6A02G350800 , TraesCS6A02G350500 , TraesCS6D02G333200
Populus -


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cDNA sequences
Sobic.009G116700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G141800 expressed protein -
2 Sobic.003G011400 similar to Os01g0225600 protein(PubMedID : 29862293)@late embryogenesis abundant protein, putative, expressed -
3 Sobic.009G046200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@peripheral-type benzodiazepine receptor, putative, expressed -
4 Sobic.007G164500 - -
5 Sobic.001G373600 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
6 Sobic.001G466450 - -
7 Sobic.001G466450 - -
8 Sobic.001G466450 - -
9 Sobic.001G466450 - -
10 Sobic.001G466450 - -
11 Sobic.001G466450 - -
12 Sobic.001G466450 - -
13 Sobic.003G024600 CAMK_KIN1/SNF1/Nim1_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
14 Sobic.001G323600 transporter family protein, putative, expressed -
15 Sobic.002G097000 expressed protein -
16 Sobic.005G088700 expressed protein -
17 Sobic.003G244100 "ABA-Responsive Element (ABRE) -binding factor BZ-1 basic-leucine zipper, maped into a stay green QTL (QSTG12_3"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@transcription factor, putative, expressed K09060: plant G-box-binding factor
18 Sobic.010G070750 - -
19 Sobic.004G308300 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
20 Sobic.009G015500 - -


Gene co-expression network
sample Sobic009G116700 Sobic009G116700 Sobic002G141800 Sobic002G141800 Sobic009G116700--Sobic002G141800 Sobic003G011400 Sobic003G011400 Sobic009G116700--Sobic003G011400 Sobic009G046200 Sobic009G046200 Sobic009G116700--Sobic009G046200 Sobic007G164500 Sobic007G164500 Sobic009G116700--Sobic007G164500 Sobic001G373600 Sobic001G373600 Sobic009G116700--Sobic001G373600 Sobic001G466450 Sobic001G466450 Sobic009G116700--Sobic001G466450 Sobic002G141800--Sobic009G116700 Sobic003G244100 Sobic003G244100 Sobic002G141800--Sobic003G244100 Sobic002G141800--Sobic003G011400 Sobic002G141800--Sobic009G046200 Sobic002G141800--Sobic007G164500 Sobic002G141800--Sobic001G373600 Sobic003G024600 Sobic003G024600 Sobic002G141800--Sobic003G024600 Sobic001G323600 Sobic001G323600 Sobic002G141800--Sobic001G323600 Sobic002G141800--Sobic001G466450 Sobic001G200700 Sobic001G200700 Sobic003G011400--Sobic001G200700 Sobic003G011400--Sobic009G116700 Sobic003G011400--Sobic009G046200 Sobic003G011400--Sobic007G164500 Sobic003G011400--Sobic001G323600 Sobic003G011400--Sobic001G373600 Sobic003G011400--Sobic003G024600 Sobic003G011400--Sobic001G466450 Sobic009G046200--Sobic001G373600 Sobic009G046200--Sobic001G466450 Sobic009G046200--Sobic007G164500 Sobic007G164500--Sobic001G373600 Sobic007G164500--Sobic001G466450 Sobic007G164500--Sobic003G024600 Sobic001G373600--Sobic007G164500 Sobic001G373600--Sobic001G466450 Sobic001G373600--Sobic003G024600 Sobic001G466450--Sobic001G466450 Sobic001G466450--Sobic007G164500 Sobic001G466450--Sobic001G373600 Sobic001G466450--Sobic003G024600
Octagon: transcription factors


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