Gene annotation
Transcriptome id Sobic.002G141800.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QB70
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g02180.1 : expressed protein
MaizeGDB (Corn) Zm00025a045999
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G141800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G116700 "dehydrin SbDHN1, maps into mapped into a stay green mQTL (QSTG meta1.9)"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@rab16/17 homolog(PubMedID : 15579713)@dehydrin, putative, expressed -
2 Sobic.003G244100 "ABA-Responsive Element (ABRE) -binding factor BZ-1 basic-leucine zipper, maped into a stay green QTL (QSTG12_3"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@transcription factor, putative, expressed K09060: plant G-box-binding factor
3 Sobic.003G011400 similar to Os01g0225600 protein(PubMedID : 29862293)@late embryogenesis abundant protein, putative, expressed -
4 Sobic.009G046200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@peripheral-type benzodiazepine receptor, putative, expressed -
5 Sobic.007G164500 - -
6 Sobic.001G373600 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
7 Sobic.003G024600 CAMK_KIN1/SNF1/Nim1_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
8 Sobic.001G323600 transporter family protein, putative, expressed -
9 Sobic.001G466450 - -
10 Sobic.001G466450 - -
11 Sobic.001G466450 - -
12 Sobic.001G466450 - -
13 Sobic.001G466450 - -
14 Sobic.001G466450 - -
15 Sobic.001G466450 - -
16 Sobic.002G097000 expressed protein -
17 Sobic.005G088700 expressed protein -
18 Sobic.001G409400 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@OsRCI2-5 - Putative low temperature and salt responsive protein, expressed -
19 Sobic.004G308300 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
20 Sobic.010G070750 - -


Gene co-expression network
sample Sobic002G141800 Sobic002G141800 Sobic009G116700 Sobic009G116700 Sobic002G141800--Sobic009G116700 Sobic003G244100 Sobic003G244100 Sobic002G141800--Sobic003G244100 Sobic003G011400 Sobic003G011400 Sobic002G141800--Sobic003G011400 Sobic009G046200 Sobic009G046200 Sobic002G141800--Sobic009G046200 Sobic007G164500 Sobic007G164500 Sobic002G141800--Sobic007G164500 Sobic001G373600 Sobic001G373600 Sobic002G141800--Sobic001G373600 Sobic003G024600 Sobic003G024600 Sobic002G141800--Sobic003G024600 Sobic001G323600 Sobic001G323600 Sobic002G141800--Sobic001G323600 Sobic001G466450 Sobic001G466450 Sobic002G141800--Sobic001G466450 Sobic009G116700--Sobic002G141800 Sobic009G116700--Sobic003G011400 Sobic009G116700--Sobic009G046200 Sobic009G116700--Sobic007G164500 Sobic009G116700--Sobic001G373600 Sobic009G116700--Sobic001G466450 Sobic003G244100--Sobic002G141800 Sobic003G244100--Sobic009G116700 Sobic003G244100--Sobic009G046200 Sobic001G409400 Sobic001G409400 Sobic003G244100--Sobic001G409400 Sobic006G104000 Sobic006G104000 Sobic003G244100--Sobic006G104000 Sobic003G244100--Sobic003G011400 Sobic002G097000 Sobic002G097000 Sobic003G244100--Sobic002G097000 Sobic003G244100--Sobic001G373600 Sobic003G244100--Sobic001G466450 Sobic001G200700 Sobic001G200700 Sobic003G011400--Sobic001G200700 Sobic003G011400--Sobic009G116700 Sobic003G011400--Sobic009G046200 Sobic003G011400--Sobic007G164500 Sobic003G011400--Sobic001G323600 Sobic003G011400--Sobic001G373600 Sobic003G011400--Sobic003G024600 Sobic003G011400--Sobic001G466450 Sobic009G046200--Sobic001G373600 Sobic009G046200--Sobic001G466450 Sobic009G046200--Sobic007G164500 Sobic007G164500--Sobic001G373600 Sobic007G164500--Sobic001G466450 Sobic007G164500--Sobic003G024600 Sobic001G373600--Sobic007G164500 Sobic001G373600--Sobic001G466450 Sobic001G373600--Sobic003G024600 Sobic003G024600--Sobic007G164500 Sobic003G024600--Sobic001G373600 Sobic003G024600--Sobic001G466450 Sobic001G323600--Sobic001G373600 Sobic001G323600--Sobic007G164500 Sobic001G323600--Sobic003G024600 Sobic005G088700 Sobic005G088700 Sobic001G323600--Sobic005G088700 Sobic001G323600--Sobic001G466450 Sobic001G466450--Sobic001G466450 Sobic001G466450--Sobic007G164500 Sobic001G466450--Sobic001G373600 Sobic001G466450--Sobic003G024600
Octagon: transcription factors


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