Gene annotation
| Transcriptome id | Sobic.001G373600.1 |
|---|---|
| Synonym | SbSWEET1-1, Sb01g035490, SbSWEET1-1;Sugars Will Eventually Be Exported Transporters |
| Functional annotation | Sugar transporter (PubMedID : 27330561) Sugar transporter (PubMedID : 27330561) nodulin MtN3 family protein, putative, expressed |
| UniProt | C5X0L3 |
| Pfam | PF03083 |
| Panther DB | PTHR10791 PTHR10791:SF39 |
| NCBI CDD | KOG1623; Multitransmembrane protein |
| KEGG Orthology | K15382; SLC50A, solute carrier family 50 (sugar transporter) |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT3G48740 : Nodulin MtN3 family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os03g22590.1 : nodulin MtN3 family protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a052387 , Zm00025a024896 , Zm00025a015665 , Zm00025a002436 |
| Brachypodium | KQK21704 |
| Barley | HORVU6Hr1G029520.8 , HORVU6Hr1G029520.2 , HORVU6Hr1G029520.3 , HORVU6Hr1G029520.1 , HORVU6Hr1G029520.6 , HORVU6Hr1G029520.7 , HORVU6Hr1G029520.4 , HORVU6Hr1G029520.5 , HORVU1Hr1G079940.6 , HORVU3Hr1G013170.3 , HORVU1Hr1G079940.5 , HORVU1Hr1G079940.2 , HORVU1Hr1G079940.3 , HORVU1Hr1G079940.1 , HORVU3Hr1G013170.1 , HORVU3Hr1G013170.2 |
| Wheat | TraesCS4A02G122100 , TraesCS4D02G183800 , TraesCS6A02G148600 , TraesCS4B02G182000 , TraesCS7A02G503100 , TraesCS6D02G138000 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.007G164500 | - | - |
| 2 | Sobic.001G466450 | - | - |
| 3 | Sobic.001G466450 | - | - |
| 4 | Sobic.001G466450 | - | - |
| 5 | Sobic.001G466450 | - | - |
| 6 | Sobic.001G466450 | - | - |
| 7 | Sobic.001G466450 | - | - |
| 8 | Sobic.001G466450 | - | - |
| 9 | Sobic.003G024600 | CAMK_KIN1/SNF1/Nim1_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | - |
| 10 | Sobic.001G323600 | transporter family protein, putative, expressed | - |
| 11 | Sobic.002G097000 | expressed protein | - |
| 12 | Sobic.005G088700 | expressed protein | - |
| 13 | Sobic.009G046200 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@peripheral-type benzodiazepine receptor, putative, expressed | - |
| 14 | Sobic.010G070750 | - | - |
| 15 | Sobic.004G308300 | xyloglucan fucosyltransferase, putative, expressed | K13681: xyloglucan fucosyltransferase |
| 16 | Sobic.006G142000 | MYB family transcription factor, putative, expressed | K09422: transcription factor MYB, plant |
| 17 | Sobic.003G011400 | similar to Os01g0225600 protein(PubMedID : 29862293)@late embryogenesis abundant protein, putative, expressed | - |
| 18 | Sobic.003G278200 | potassium channel AKT1, putative, expressed | - |
| 19 | Sobic.009G116700 | "dehydrin SbDHN1, maps into mapped into a stay green mQTL (QSTG meta1.9)"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@rab16/17 homolog(PubMedID : 15579713)@dehydrin, putative, expressed | - |
| 20 | Sobic.009G158600 | - | - |
Gene co-expression network
Octagon: transcription factors
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