Gene annotation
| Transcriptome id | Sobic.001G323600.1 |
|---|---|
| Synonym | Sb01g031360, PMT5, ATPLT5, ATPMT5 |
| Functional annotation | transporter family protein, putative, expressed |
| UniProt | C5WVF8 |
| Pfam | PF07690 |
| Panther DB | PTHR23500 PTHR23500:SF177 |
| NCBI CDD | KOG0254; Predicted transporter (major facilitator superfamily) |
| KEGG Orthology | - |
| Gene Ontology | GO:0016021; integral component of membrane |
Orthologs (automatic annotation)
| TAIR | AT3G18830 : polyol/monosaccharide transporter 5 |
|---|---|
| RAP-DB (Rice) | LOC_Os07g39350.1 : transporter family protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a048523 , Zm00025a003056 , Zm00025a015023 , Zm00025a048519 |
| Brachypodium | KQK15522 , KQK23114 , KQK23113 , KQJ89260 , KQK20769 |
| Barley | HORVU5Hr1G106160.1 , HORVU5Hr1G106160.2 , HORVU2Hr1G036590.4 , HORVU2Hr1G036590.3 , HORVU2Hr1G036590.2 , HORVU2Hr1G036590.1 |
| Wheat | TraesCS1A02G426300 , TraesCS5A02G440100 , TraesCS5D02G447300 , TraesCS2A02G188600 , TraesCS5B02G443900 , TraesCS2B02G218700 , TraesCS4A02G042000 , TraesCS4A02G042100 , TraesCS2D02G199100 , TraesCS1D02G435800 , TraesCS4D02G263000 , TraesCS5A02G102500 , TraesCS5A02G102500 , TraesCS5A02G102500 , TraesCS1B02G460700 , TraesCS1B02G460700 , TraesCS4B02G262900 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G373600 | Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed | K15382: SLC50A, solute carrier family 50 (sugar transporter) |
| 2 | Sobic.007G164500 | - | - |
| 3 | Sobic.003G024600 | CAMK_KIN1/SNF1/Nim1_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | - |
| 4 | Sobic.005G088700 | expressed protein | - |
| 5 | Sobic.001G466450 | - | - |
| 6 | Sobic.001G466450 | - | - |
| 7 | Sobic.001G466450 | - | - |
| 8 | Sobic.001G466450 | - | - |
| 9 | Sobic.001G466450 | - | - |
| 10 | Sobic.001G466450 | - | - |
| 11 | Sobic.001G466450 | - | - |
| 12 | Sobic.002G097000 | expressed protein | - |
| 13 | Sobic.010G070750 | - | - |
| 14 | Sobic.009G046200 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@peripheral-type benzodiazepine receptor, putative, expressed | - |
| 15 | Sobic.004G308300 | xyloglucan fucosyltransferase, putative, expressed | K13681: xyloglucan fucosyltransferase |
| 16 | Sobic.009G015500 | - | - |
| 17 | Sobic.009G158600 | - | - |
| 18 | Sobic.006G142000 | MYB family transcription factor, putative, expressed | K09422: transcription factor MYB, plant |
| 19 | Sobic.007G058600 | O-methyltransferase, putative, expressed | K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase |
| 20 | Sobic.003G011400 | similar to Os01g0225600 protein(PubMedID : 29862293)@late embryogenesis abundant protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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