Gene annotation
Transcriptome id Sobic.007G088300.2
Synonym Sb07g007690, LEA4-5
Functional annotation late embryogenesis abundant group 1, putative, expressed
UniProt C5YJH2
Pfam PF03760
Panther DB PTHR33493 PTHR33493:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009790; embryo development


Orthologs (automatic annotation)
TAIR AT5G06760 : Late Embryogenesis Abundant 4-5
RAP-DB (Rice) LOC_Os08g23870.1 : late embryogenesis abundant group 1, putative, expressed
MaizeGDB (Corn) Zm00025a054989
Brachypodium KQK07117
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G515700 expressed protein -
2 Sobic.002G243100 expressed protein -
3 Sobic.004G196900 - -
4 Sobic.003G241400 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@seed maturation protein PM41, putative, expressed -
5 Sobic.006G196700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@late embryogenesis abundant group 1, putative, expressed -
6 Sobic.002G089300 LTPL54 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
7 Sobic.001G388100 Up-reguralion under drought(PubMedID : 24916767)@Late embryogenesis abundant protein 1("PubMedID : 26759170,PubMedID : 24597475")@late embryogenesis abundant protein 1, putative, expressed -
8 Sobic.004G196000 late embryogenesis abundant protein D-34, putative, expressed -
9 Sobic.001G495850 - -
10 Sobic.010G262650 - K14553: U3 small nucleolar RNA-associated protein 18
11 Sobic.006G159700 serpin domain containing protein, putative, expressed K13963: serpin B
12 Sobic.010G212900 expressed protein -
13 Sobic.006G261000 cytochrome P450, putative, expressed -
14 Sobic.001G379800 OsFBX72 - F-box domain containing protein, expressed -
15 Sobic.009G150800 indole-3-acetate beta-glucosyltransferase, putative, expressed -
16 Sobic.003G429101 - -
17 Sobic.005G029300 - -
18 Sobic.003G046900 expressed protein -
19 Sobic.008G192100 Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
20 Sobic.006G236100 - -


Gene co-expression network
sample Sobic007G088300 Sobic007G088300 Sobic001G515700 Sobic001G515700 Sobic007G088300--Sobic001G515700 Sobic002G243100 Sobic002G243100 Sobic007G088300--Sobic002G243100 Sobic004G196900 Sobic004G196900 Sobic007G088300--Sobic004G196900 Sobic003G241400 Sobic003G241400 Sobic007G088300--Sobic003G241400 Sobic006G196700 Sobic006G196700 Sobic007G088300--Sobic006G196700 Sobic002G089300 Sobic002G089300 Sobic007G088300--Sobic002G089300 Sobic001G388100 Sobic001G388100 Sobic007G088300--Sobic001G388100 Sobic004G196000 Sobic004G196000 Sobic007G088300--Sobic004G196000 Sobic001G495850 Sobic001G495850 Sobic007G088300--Sobic001G495850 Sobic001G515700--Sobic007G088300 Sobic001G515700--Sobic002G243100 Sobic001G515700--Sobic004G196900 Sobic001G515700--Sobic001G495850 Sobic007G004900 Sobic007G004900 Sobic001G515700--Sobic007G004900 Sobic001G311200 Sobic001G311200 Sobic001G515700--Sobic001G311200 Sobic001G091000 Sobic001G091000 Sobic001G515700--Sobic001G091000 Sobic001G515700--Sobic001G388100 Sobic004G111500 Sobic004G111500 Sobic001G515700--Sobic004G111500 Sobic002G243100--Sobic004G196900 Sobic002G243100--Sobic001G495850 Sobic002G243100--Sobic001G388100 Sobic002G243100--Sobic003G241400 Sobic002G243100--Sobic001G515700 Sobic002G243100--Sobic007G088300 Sobic009G150800 Sobic009G150800 Sobic002G243100--Sobic009G150800 Sobic002G243100--Sobic002G089300 Sobic001G090900 Sobic001G090900 Sobic002G243100--Sobic001G090900 Sobic004G196900--Sobic002G089300 Sobic004G196900--Sobic002G243100 Sobic006G229400 Sobic006G229400 Sobic004G196900--Sobic006G229400 Sobic004G196900--Sobic003G241400 Sobic001G379800 Sobic001G379800 Sobic004G196900--Sobic001G379800 Sobic004G196900--Sobic004G196000 Sobic004G196900--Sobic001G495850 Sobic006G236100 Sobic006G236100 Sobic004G196900--Sobic006G236100 Sobic006G261000 Sobic006G261000 Sobic004G196900--Sobic006G261000 Sobic003G241400--Sobic006G261000 Sobic003G241400--Sobic009G150800 Sobic003G241400--Sobic001G388100 Sobic003G241400--Sobic001G495850 Sobic009G214700 Sobic009G214700 Sobic003G241400--Sobic009G214700 Sobic007G075200 Sobic007G075200 Sobic003G241400--Sobic007G075200 Sobic003G389500 Sobic003G389500 Sobic003G241400--Sobic003G389500 Sobic003G241400--Sobic006G196700 Sobic003G241400--Sobic004G196000 Sobic006G196700--Sobic006G261000 Sobic002G269700 Sobic002G269700 Sobic006G196700--Sobic002G269700 Sobic006G196700--Sobic003G241400 Sobic006G196700--Sobic007G075200 Sobic006G018500 Sobic006G018500 Sobic006G196700--Sobic006G018500 Sobic002G213050 Sobic002G213050 Sobic006G196700--Sobic002G213050 Sobic006G196700--Sobic009G214700 Sobic005G199500 Sobic005G199500 Sobic006G196700--Sobic005G199500 Sobic006G196700--Sobic003G389500 Sobic002G089300--Sobic004G196900 Sobic002G089300--Sobic006G229400 Sobic002G089300--Sobic001G379800 Sobic002G089300--Sobic004G196000 Sobic001G450100 Sobic001G450100 Sobic002G089300--Sobic001G450100 Sobic002G089300--Sobic003G389500 Sobic003G063600 Sobic003G063600 Sobic002G089300--Sobic003G063600 Sobic005G029300 Sobic005G029300 Sobic002G089300--Sobic005G029300 Sobic002G089300--Sobic006G236100 Sobic001G388100--Sobic001G495850 Sobic001G388100--Sobic009G150800 Sobic001G388100--Sobic003G241400 Sobic006G084100 Sobic006G084100 Sobic001G388100--Sobic006G084100 Sobic001G388100--Sobic006G261000 Sobic001G388100--Sobic009G214700 Sobic001G388100--Sobic007G075200 Sobic001G388100--Sobic006G196700 Sobic003G046900 Sobic003G046900 Sobic001G388100--Sobic003G046900 Sobic008G192100 Sobic008G192100 Sobic004G196000--Sobic008G192100 Sobic001G493300 Sobic001G493300 Sobic004G196000--Sobic001G493300 Sobic008G192200 Sobic008G192200 Sobic004G196000--Sobic008G192200 Sobic001G272300 Sobic001G272300 Sobic004G196000--Sobic001G272300 Sobic001G495850--Sobic001G388100 Sobic001G495850--Sobic009G150800 Sobic001G495850--Sobic003G241400 Sobic001G495850--Sobic006G261000 Sobic001G495850--Sobic002G243100 Sobic001G495850--Sobic006G084100 Sobic001G495850--Sobic009G214700 Sobic001G495850--Sobic004G196900 Sobic008G102050 Sobic008G102050 Sobic001G495850--Sobic008G102050
Octagon: transcription factors


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