Gene annotation
Transcriptome id Sobic.003G429101.1
Synonym -
Functional annotation -
UniProt A0A1W0W1D1
Pfam PF03479
Panther DB PTHR31100 PTHR31100:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G49700 : Predicted AT-hook DNA-binding family protein
RAP-DB (Rice) LOC_Os01g72450.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a025945 , Zm00025a051503
Brachypodium KQK17622
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G046900 expressed protein -
2 Sobic.010G212900 expressed protein -
3 Sobic.001G220066 - -
4 Sobic.002G348200 expressed protein -
5 Sobic.002G157350 - -
6 Sobic.004G196000 late embryogenesis abundant protein D-34, putative, expressed -
7 Sobic.009G214700 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@bHelix-loop-helix transcription factor, putative, expressed -
8 Sobic.006G149650 - -
9 Sobic.008G192200 - -
10 Sobic.003G058400 annexin, putative, expressed -
11 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
12 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
13 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
14 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
15 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
16 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
17 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
18 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
19 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
20 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic003G429101 Sobic003G429101 Sobic003G046900 Sobic003G046900 Sobic003G429101--Sobic003G046900 Sobic010G212900 Sobic010G212900 Sobic003G429101--Sobic010G212900 Sobic001G220066 Sobic001G220066 Sobic003G429101--Sobic001G220066 Sobic002G348200 Sobic002G348200 Sobic003G429101--Sobic002G348200 Sobic002G157350 Sobic002G157350 Sobic003G429101--Sobic002G157350 Sobic004G196000 Sobic004G196000 Sobic003G429101--Sobic004G196000 Sobic009G214700 Sobic009G214700 Sobic003G429101--Sobic009G214700 Sobic006G149650 Sobic006G149650 Sobic003G429101--Sobic006G149650 Sobic008G192200 Sobic008G192200 Sobic003G429101--Sobic008G192200 Sobic003G046900--Sobic004G196000 Sobic003G046900--Sobic008G192200 Sobic001G272300 Sobic001G272300 Sobic003G046900--Sobic001G272300 Sobic010G212900--Sobic003G046900 Sobic010G212900--Sobic004G196000 Sobic010G262650 Sobic010G262650 Sobic010G212900--Sobic010G262650 Sobic008G192100 Sobic008G192100 Sobic010G212900--Sobic008G192100 Sobic010G212900--Sobic008G192200 Sobic010G212900--Sobic006G149650 Sobic001G543000 Sobic001G543000 Sobic010G212900--Sobic001G543000 Sobic005G082950 Sobic005G082950 Sobic010G212900--Sobic005G082950 Sobic002G081000 Sobic002G081000 Sobic010G212900--Sobic002G081000 Sobic001G220066--Sobic002G157350 Sobic001G220066--Sobic001G272300 Sobic002G348200--Sobic001G220066 Sobic002G348200--Sobic002G157350 Sobic002G348200--Sobic001G272300 Sobic002G157350--Sobic001G220066 Sobic002G157350--Sobic001G272300 Sobic004G196000--Sobic008G192100 Sobic001G493300 Sobic001G493300 Sobic004G196000--Sobic001G493300 Sobic004G196000--Sobic008G192200 Sobic004G196000--Sobic001G272300 Sobic006G261000 Sobic006G261000 Sobic009G214700--Sobic006G261000 Sobic007G075200 Sobic007G075200 Sobic009G214700--Sobic007G075200 Sobic001G267950 Sobic001G267950 Sobic009G214700--Sobic001G267950 Sobic009G214700--Sobic003G046900 Sobic006G018500 Sobic006G018500 Sobic009G214700--Sobic006G018500 Sobic005G199500 Sobic005G199500 Sobic009G214700--Sobic005G199500 Sobic003G049100 Sobic003G049100 Sobic009G214700--Sobic003G049100 Sobic009G214700--Sobic004G196000 Sobic009G214700--Sobic008G192200 Sobic006G149650--Sobic003G046900 Sobic006G178200 Sobic006G178200 Sobic006G149650--Sobic006G178200 Sobic006G149650--Sobic005G082950 Sobic006G149650--Sobic010G212900 Sobic010G021600 Sobic010G021600 Sobic006G149650--Sobic010G021600 Sobic006G149650--Sobic004G196000 Sobic006G149650--Sobic008G192200 Sobic006G149650--Sobic008G192100 Sobic006G149650--Sobic001G272300 Sobic008G192200--Sobic001G272300
Octagon: transcription factors


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