Gene annotation
Transcriptome id Sobic.009G214700.1,Sobic.009G214700.2
Synonym Sb09g027030,
Functional annotation Up-reguralion under heat (PubMedID : 24916767)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
bHelix-loop-helix transcription factor, putative, expressed
UniProt C5YUV2
Pfam -
Panther DB PTHR12565 PTHR12565:SF174
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G21330 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os01g51140.1 : helix-loop-helix DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044411 , Zm00025a027841 , Zm00025a038373 , Zm00025a028423
Brachypodium KQK09409 , KQJ90506
Barley HORVU1Hr1G079450.1 , HORVU1Hr1G079450.2 , HORVU3Hr1G048770.2 , HORVU3Hr1G066600.7 , HORVU3Hr1G066600.6 , HORVU3Hr1G066600.5 , HORVU3Hr1G066600.4 , HORVU3Hr1G066600.3 , HORVU3Hr1G066600.2 , HORVU3Hr1G066600.1 , HORVU3Hr1G048770.1
Wheat TraesCS3B02G233700 , TraesCS3B02G233700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G261000 cytochrome P450, putative, expressed -
2 Sobic.007G075200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional purine biosynthesis protein purH, putative, expressed K00602: phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase
3 Sobic.001G267950 - -
4 Sobic.003G046900 expressed protein -
5 Sobic.006G018500 - -
6 Sobic.005G199500 OsFBL58 - F-box domain and LRR containing protein, expressed -
7 Sobic.003G049100 prolyl 4-hydroxylase, putative, expressed K00472: prolyl 4-hydroxylase
8 Sobic.004G196000 late embryogenesis abundant protein D-34, putative, expressed -
9 Sobic.008G192200 - -
10 Sobic.003G353050 - -
11 Sobic.002G081000 OsMADS70 - MADS-box family gene with M-alpha type-box, expressed -
12 Sobic.003G389500 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
13 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
14 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
15 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
16 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
17 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
18 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
19 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -
20 Sobic.001G272300 OsFBX356 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic009G214700 Sobic009G214700 Sobic006G261000 Sobic006G261000 Sobic009G214700--Sobic006G261000 Sobic007G075200 Sobic007G075200 Sobic009G214700--Sobic007G075200 Sobic001G267950 Sobic001G267950 Sobic009G214700--Sobic001G267950 Sobic003G046900 Sobic003G046900 Sobic009G214700--Sobic003G046900 Sobic006G018500 Sobic006G018500 Sobic009G214700--Sobic006G018500 Sobic005G199500 Sobic005G199500 Sobic009G214700--Sobic005G199500 Sobic003G049100 Sobic003G049100 Sobic009G214700--Sobic003G049100 Sobic004G196000 Sobic004G196000 Sobic009G214700--Sobic004G196000 Sobic008G192200 Sobic008G192200 Sobic009G214700--Sobic008G192200 Sobic006G261000--Sobic007G075200 Sobic006G261000--Sobic009G214700 Sobic006G261000--Sobic006G018500 Sobic003G241400 Sobic003G241400 Sobic006G261000--Sobic003G241400 Sobic003G389500 Sobic003G389500 Sobic006G261000--Sobic003G389500 Sobic006G261000--Sobic004G196000 Sobic006G261000--Sobic001G267950 Sobic006G261000--Sobic005G199500 Sobic002G213050 Sobic002G213050 Sobic006G261000--Sobic002G213050 Sobic007G075200--Sobic006G261000 Sobic007G075200--Sobic009G214700 Sobic007G075200--Sobic008G192200 Sobic003G091100 Sobic003G091100 Sobic007G075200--Sobic003G091100 SobicK042700 SobicK042700 Sobic007G075200--SobicK042700 Sobic001G272300 Sobic001G272300 Sobic007G075200--Sobic001G272300 Sobic001G267950--Sobic005G199500 Sobic002G069601 Sobic002G069601 Sobic001G267950--Sobic002G069601 Sobic001G267950--Sobic006G018500 Sobic003G353050 Sobic003G353050 Sobic001G267950--Sobic003G353050 Sobic001G267950--Sobic007G075200 Sobic003G318400 Sobic003G318400 Sobic001G267950--Sobic003G318400 Sobic001G267950--Sobic009G214700 Sobic001G267950--Sobic008G192200 Sobic001G267950--Sobic003G049100 Sobic003G046900--Sobic004G196000 Sobic003G046900--Sobic008G192200 Sobic003G046900--Sobic001G272300 Sobic006G018500--Sobic005G199500 Sobic006G018500--Sobic002G213050 Sobic006G018500--Sobic001G267950 Sobic006G018500--Sobic006G261000 Sobic006G018500--Sobic007G075200 Sobic001G418300 Sobic001G418300 Sobic006G018500--Sobic001G418300 Sobic007G069750 Sobic007G069750 Sobic006G018500--Sobic007G069750 Sobic001G472900 Sobic001G472900 Sobic006G018500--Sobic001G472900 Sobic006G018500--Sobic009G214700 Sobic005G199500--Sobic006G018500 Sobic005G199500--Sobic007G069750 Sobic005G199500--Sobic002G213050 Sobic005G199500--Sobic001G267950 Sobic005G199500--Sobic001G418300 Sobic010G129900 Sobic010G129900 Sobic005G199500--Sobic010G129900 Sobic005G199500--Sobic006G261000 Sobic005G199500--Sobic009G214700 Sobic005G199500--Sobic007G075200 Sobic001G218701 Sobic001G218701 Sobic003G049100--Sobic001G218701 Sobic002G081000 Sobic002G081000 Sobic003G049100--Sobic002G081000 Sobic003G058400 Sobic003G058400 Sobic003G049100--Sobic003G058400 Sobic003G049100--Sobic008G192200 Sobic003G049100--Sobic001G272300 Sobic008G192100 Sobic008G192100 Sobic004G196000--Sobic008G192100 Sobic001G493300 Sobic001G493300 Sobic004G196000--Sobic001G493300 Sobic004G196000--Sobic008G192200 Sobic004G196000--Sobic001G272300 Sobic008G192200--Sobic001G272300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.